Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHPFQ8IZ52 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 SPDYE13P-201ENST00000445314 798 ntBASIC19.07■□□□□ 0.64
CHPFQ8IZ52 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.07■□□□□ 0.64
CHPFQ8IZ52 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.07■□□□□ 0.64
CHPFQ8IZ52 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 AC125437.2-201ENST00000625180 2167 ntBASIC19.06■□□□□ 0.64
CHPFQ8IZ52 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHPFQ8IZ52 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 AC112497.1-201ENST00000624824 639 ntBASIC19.05■□□□□ 0.64
CHPFQ8IZ52 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHPFQ8IZ52 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHPFQ8IZ52 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms