Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 LCN15-202ENST00000482511 2885 ntTSL 1 (best)15.53■□□□□ 0.083e-7■■□□□ 12.7
LARP4Q71RC2 LCN15-203ENST00000495223 289 ntTSL 514.89□□□□□ -0.033e-7■■□□□ 12.7
LARP4Q71RC2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.133e-7■■□□□ 12.7
LARP4Q71RC2 NCL-202ENST00000356936 890 ntTSL 315.71■□□□□ 0.115e-8■■□□□ 12.7
LARP4Q71RC2 CHURC1-207ENST00000556089 571 ntTSL 25.77□□□□□ -1.498e-7■■□□□ 12.7
LARP4Q71RC2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.31e-9■■□□□ 12.6
LARP4Q71RC2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.011e-9■■□□□ 12.6
LARP4Q71RC2 PARK7-204ENST00000377493 795 ntTSL 2 BASIC12.21□□□□□ -0.451e-9■■□□□ 12.6
LARP4Q71RC2 PARK7-202ENST00000377488 783 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.71e-9■■□□□ 12.6
LARP4Q71RC2 PARK7-209ENST00000493678 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.861e-9■■□□□ 12.6
LARP4Q71RC2 PARK7-207ENST00000469225 711 ntTSL 38.53□□□□□ -1.041e-9■■□□□ 12.6
LARP4Q71RC2 RPL23-201ENST00000245857 588 ntTSL 3 BASIC9.65□□□□□ -0.862e-47■■□□□ 12.6
LARP4Q71RC2 EEF1D-221ENST00000528382 308 ntTSL 515.64■□□□□ 0.094e-8■■□□□ 12.6
LARP4Q71RC2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.54e-8■■□□□ 12.6
LARP4Q71RC2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.444e-8■■□□□ 12.6
LARP4Q71RC2 DUS1L-204ENST00000542088 1040 ntTSL 316.31■□□□□ 0.24e-8■■□□□ 12.6
LARP4Q71RC2 DUS1L-203ENST00000538833 1250 ntTSL 1 (best)16.07■□□□□ 0.164e-8■■□□□ 12.6
LARP4Q71RC2 DUS1L-210ENST00000578846 4456 ntTSL 213.93□□□□□ -0.184e-8■■□□□ 12.6
LARP4Q71RC2 DUS1L-205ENST00000577574 473 ntTSL 513.39□□□□□ -0.274e-8■■□□□ 12.6
LARP4Q71RC2 DUS1L-212ENST00000579854 657 ntTSL 212.94□□□□□ -0.344e-8■■□□□ 12.6
LARP4Q71RC2 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.741e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)22.25■■□□□ 1.152e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.112e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.052e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.51■■□□□ 1.032e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-210ENST00000581608 2387 ntTSL 220.57■□□□□ 0.882e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-221ENST00000585274 984 ntTSL 516.53■□□□□ 0.242e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-204ENST00000577733 5503 ntTSL 216.04■□□□□ 0.162e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-218ENST00000583744 539 ntTSL 414.04□□□□□ -0.162e-6■■□□□ 12.6
LARP4Q71RC2 ASPSCR1-205ENST00000578236 3277 ntTSL 213.31□□□□□ -0.282e-6■■□□□ 12.6
LARP4Q71RC2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.972e-6■■□□□ 12.6
LARP4Q71RC2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -02e-6■■□□□ 12.6
LARP4Q71RC2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.32e-6■■□□□ 12.6
LARP4Q71RC2 UBL7-207ENST00000565494 458 ntTSL 211.53□□□□□ -0.562e-6■■□□□ 12.6
LARP4Q71RC2 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.612e-6■■□□□ 12.6
LARP4Q71RC2 UBL7-204ENST00000564488 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.622e-6■■□□□ 12.6
LARP4Q71RC2 UBL7-208ENST00000566365 661 ntTSL 310.15□□□□□ -0.782e-6■■□□□ 12.6
LARP4Q71RC2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.712e-10■■□□□ 12.6
LARP4Q71RC2 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC10.97□□□□□ -0.652e-7■■□□□ 12.6
LARP4Q71RC2 FCGRT-211ENST00000598076 676 ntTSL 312.38□□□□□ -0.439e-10■■□□□ 12.6
LARP4Q71RC2 PSME1-208ENST00000561059 947 ntTSL 212.15□□□□□ -0.468e-8■■□□□ 12.6
LARP4Q71RC2 PSME1-203ENST00000470718 476 ntTSL 33.19□□□□□ -1.98e-8■■□□□ 12.6
LARP4Q71RC2 GRINA-210ENST00000534791 1050 ntTSL 59.61□□□□□ -0.874e-8■■□□□ 12.6
LARP4Q71RC2 GRINA-208ENST00000533044 564 ntTSL 38.5□□□□□ -1.054e-8■■□□□ 12.6
LARP4Q71RC2 PTMA-206ENST00000412128 863 ntTSL 322.38■■□□□ 1.174e-17■■□□□ 12.6
LARP4Q71RC2 ATP5D-208ENST00000592624 1587 nt18.85■□□□□ 0.615e-10■■□□□ 12.6
LARP4Q71RC2 PTMA-212ENST00000481928 1635 ntTSL 315.99■□□□□ 0.154e-17■■□□□ 12.6
LARP4Q71RC2 PTMA-208ENST00000448874 1108 ntTSL 215.11■□□□□ 0.014e-17■■□□□ 12.6
LARP4Q71RC2 PTMA-209ENST00000466801 784 ntTSL 510.62□□□□□ -0.714e-17■■□□□ 12.6
LARP4Q71RC2 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC10.34□□□□□ -0.754e-17■■□□□ 12.6
LARP4Q71RC2 PTMA-203ENST00000409321 735 ntTSL 3 BASIC9.81□□□□□ -0.844e-17■■□□□ 12.6
LARP4Q71RC2 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.984e-17■■□□□ 12.6
LARP4Q71RC2 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.054e-17■■□□□ 12.6
LARP4Q71RC2 APOA2-206ENST00000469730 265 ntTSL 510.41□□□□□ -0.741e-323■■□□□ 12.6
LARP4Q71RC2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.781e-6■■□□□ 12.6
LARP4Q71RC2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.76e-8■■□□□ 12.6
LARP4Q71RC2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.586e-8■■□□□ 12.6
LARP4Q71RC2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.893e-8■■□□□ 12.6
LARP4Q71RC2 NDUFAF8-202ENST00000573090 741 ntTSL 320.11■□□□□ 0.813e-8■■□□□ 12.6
LARP4Q71RC2 NDUFAF8-205ENST00000576002 365 ntTSL 213.95□□□□□ -0.183e-8■■□□□ 12.6
LARP4Q71RC2 NDUFAF8-203ENST00000573173 709 ntTSL 211.94□□□□□ -0.53e-8■■□□□ 12.6
LARP4Q71RC2 NDUFS8-208ENST00000526446 814 ntTSL 516.11■□□□□ 0.171e-6■■□□□ 12.6
LARP4Q71RC2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.339e-12■■□□□ 12.6
LARP4Q71RC2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.213e-69■■□□□ 12.6
LARP4Q71RC2 APOH-204ENST00000585162 407 ntTSL 23.57□□□□□ -1.843e-69■■□□□ 12.6
LARP4Q71RC2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.86■■□□□ 1.576e-7■■□□□ 12.6
LARP4Q71RC2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.222e-6■■□□□ 12.6
LARP4Q71RC2 CPOX-205ENST00000515041 1030 ntTSL 222.44■■□□□ 1.182e-6■■□□□ 12.6
LARP4Q71RC2 CPOX-204ENST00000513674 826 ntTSL 521.02■□□□□ 0.962e-6■■□□□ 12.6
LARP4Q71RC2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.561e-7■■□□□ 12.6
LARP4Q71RC2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.367e-21■■□□□ 12.6
LARP4Q71RC2 ARID4B-204ENST00000418304 1759 ntTSL 516.93■□□□□ 0.31e-7■■□□□ 12.6
LARP4Q71RC2 SREK1-212ENST00000522912 2047 ntTSL 1 (best)16.6■□□□□ 0.251e-7■■□□□ 12.6
LARP4Q71RC2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.241e-7■■□□□ 12.6
LARP4Q71RC2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.26■□□□□ 0.191e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.19■□□□□ 0.181e-7■■□□□ 12.6
LARP4Q71RC2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.18■□□□□ 0.186e-7■■□□□ 12.6
LARP4Q71RC2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.016e-7■■□□□ 12.6
LARP4Q71RC2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.99□□□□□ -0.011e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-219ENST00000608720 2241 ntTSL 1 (best)14.7□□□□□ -0.061e-7■■□□□ 12.6
LARP4Q71RC2 AHSA2-205ENST00000471542 1971 ntTSL 214.59□□□□□ -0.076e-7■■□□□ 12.6
LARP4Q71RC2 SREK1-209ENST00000520953 2172 ntTSL 514.46□□□□□ -0.11e-7■■□□□ 12.6
LARP4Q71RC2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.131e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.131e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.22□□□□□ -0.131e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-203ENST00000422109 2964 ntTSL 1 (best)13.74□□□□□ -0.211e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.74□□□□□ -0.211e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-213ENST00000607923 2964 ntTSL 1 (best)13.74□□□□□ -0.211e-7■■□□□ 12.6
LARP4Q71RC2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.241e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.77□□□□□ -0.361e-7■■□□□ 12.6
LARP4Q71RC2 PUM2-206ENST00000424110 546 ntTSL 412.67□□□□□ -0.381e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.391e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.441e-7■■□□□ 12.6
LARP4Q71RC2 CDK5RAP2-212ENST00000480112 5826 ntTSL 1 (best)12.16□□□□□ -0.461e-7■■□□□ 12.6
LARP4Q71RC2 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.04□□□□□ -0.481e-7■■□□□ 12.6
LARP4Q71RC2 MPP1-208ENST00000439370 2066 ntTSL 511.93□□□□□ -0.51e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-209ENST00000433949 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.511e-7■■□□□ 12.6
LARP4Q71RC2 EIF3I-205ENST00000483517 744 ntTSL 511.74□□□□□ -0.531e-7■■□□□ 12.6
LARP4Q71RC2 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)11.71□□□□□ -0.531e-7■■□□□ 12.6
LARP4Q71RC2 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.551e-7■■□□□ 12.6
Retrieved 100 of 15,922 protein–RNA pairs in 263 ms