RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
CTCFL-204ENST00000422869 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
CTCFL-204ENST00000422869 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
CTCFL-204ENST00000422869 HRCP23327 699 aa21.39■■□□□ 1.02
CTCFL-204ENST00000422869 MYO15BQ96JP2 1530 aa21.33■■□□□ 1
CTCFL-204ENST00000422869 ZCCHC6Q5VYS8 1495 aaKnown RBP21.29■■□□□ 1
CTCFL-204ENST00000422869 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
CTCFL-204ENST00000422869 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
CTCFL-204ENST00000422869 PCGF6Q9BYE7 350 aa21.03■□□□□ 0.96
CTCFL-204ENST00000422869 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
CTCFL-204ENST00000422869 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
CTCFL-204ENST00000422869 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
CTCFL-204ENST00000422869 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
CTCFL-204ENST00000422869 TRIM26Q12899 539 aaPredicted RBP20.49■□□□□ 0.87
CTCFL-204ENST00000422869 ABCC9O60706 1549 aa20.21■□□□□ 0.83
CTCFL-204ENST00000422869 ZEB1P37275 1124 aaPredicted RBP20.21■□□□□ 0.83
CTCFL-204ENST00000422869 PELP1Q8IZL8 1130 aaKnown RBP20.16■□□□□ 0.82
CTCFL-204ENST00000422869 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
CTCFL-204ENST00000422869 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.79
CTCFL-204ENST00000422869 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
CTCFL-204ENST00000422869 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
CTCFL-204ENST00000422869 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
CTCFL-204ENST00000422869 SCRIBQ14160 1630 aa19.86■□□□□ 0.77
CTCFL-204ENST00000422869 EHMT2Q96KQ7 1210 aa19.71■□□□□ 0.75
CTCFL-204ENST00000422869 ACIN1Q9UKV3 1341 aaKnown RBP19.65■□□□□ 0.74
CTCFL-204ENST00000422869 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
CTCFL-204ENST00000422869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
CTCFL-204ENST00000422869 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
CTCFL-204ENST00000422869 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
CTCFL-204ENST00000422869 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.72
CTCFL-204ENST00000422869 WIZO95785 1651 aa19.47■□□□□ 0.71
CTCFL-204ENST00000422869 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
CTCFL-204ENST00000422869 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
CTCFL-204ENST00000422869 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
CTCFL-204ENST00000422869 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
CTCFL-204ENST00000422869 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
CTCFL-204ENST00000422869 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
CTCFL-204ENST00000422869 NACADO15069 1562 aa19.31■□□□□ 0.68
CTCFL-204ENST00000422869 MYT1Q01538 1121 aa19.29■□□□□ 0.68
CTCFL-204ENST00000422869 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
CTCFL-204ENST00000422869 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
CTCFL-204ENST00000422869 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
CTCFL-204ENST00000422869 TTBK1Q5TCY1 1321 aaPredicted RBP19.21■□□□□ 0.67
CTCFL-204ENST00000422869 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
CTCFL-204ENST00000422869 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.66
CTCFL-204ENST00000422869 TOP2AP11388 1531 aaKnown RBP19.11■□□□□ 0.65
CTCFL-204ENST00000422869 SOGA1O94964 1423 aa19.11■□□□□ 0.65
CTCFL-204ENST00000422869 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
CTCFL-204ENST00000422869 YTHDC1Q96MU7 727 aaKnown RBP19.04■□□□□ 0.64
CTCFL-204ENST00000422869 RUSC2Q8N2Y8 1516 aa19.01■□□□□ 0.63
CTCFL-204ENST00000422869 EEA1Q15075 1411 aa19.01■□□□□ 0.63
CTCFL-204ENST00000422869 MIER1Q8N108 512 aa19■□□□□ 0.63
CTCFL-204ENST00000422869 SMARCA4P51532 1647 aa18.99■□□□□ 0.63
CTCFL-204ENST00000422869 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
CTCFL-204ENST00000422869 GOLGA3Q08378 1498 aa18.95■□□□□ 0.62
CTCFL-204ENST00000422869 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
CTCFL-204ENST00000422869 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
CTCFL-204ENST00000422869 KIF21BO75037 1637 aa18.81■□□□□ 0.6
CTCFL-204ENST00000422869 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
CTCFL-204ENST00000422869 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.6
CTCFL-204ENST00000422869 CLIP1P30622 1438 aa18.75■□□□□ 0.59
CTCFL-204ENST00000422869 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
CTCFL-204ENST00000422869 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
CTCFL-204ENST00000422869 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
CTCFL-204ENST00000422869 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
CTCFL-204ENST00000422869 SUPT16HQ9Y5B9 1047 aaKnown RBP18.63■□□□□ 0.57
CTCFL-204ENST00000422869 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
CTCFL-204ENST00000422869 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
CTCFL-204ENST00000422869 APLP2Q06481 763 aa18.58■□□□□ 0.57
CTCFL-204ENST00000422869 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.57
CTCFL-204ENST00000422869 PRKCSHP14314 528 aaPredicted RBP18.54■□□□□ 0.56
CTCFL-204ENST00000422869 RANGAP1P46060 587 aaPredicted RBP18.47■□□□□ 0.55
CTCFL-204ENST00000422869 TSHZ2Q9NRE2 1034 aa18.46■□□□□ 0.55
CTCFL-204ENST00000422869 BICRAQ9NZM4 1560 aa18.45■□□□□ 0.54
CTCFL-204ENST00000422869 ARAP1Q96P48 1450 aa18.44■□□□□ 0.54
CTCFL-204ENST00000422869 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
CTCFL-204ENST00000422869 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
CTCFL-204ENST00000422869 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
CTCFL-204ENST00000422869 CUX2O14529 1486 aa18.4■□□□□ 0.54
CTCFL-204ENST00000422869 KANK4Q5T7N3 995 aaPredicted RBP18.39■□□□□ 0.54
CTCFL-204ENST00000422869 PRXQ9BXM0 1461 aa18.36■□□□□ 0.53
CTCFL-204ENST00000422869 BIVM-ERCC5R4GMW8 1640 aa18.35■□□□□ 0.53
CTCFL-204ENST00000422869 ANP32EQ9BTT0 268 aa18.35■□□□□ 0.53
CTCFL-204ENST00000422869 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
CTCFL-204ENST00000422869 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
CTCFL-204ENST00000422869 KCNH8Q96L42 1107 aa18.32■□□□□ 0.52
CTCFL-204ENST00000422869 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
CTCFL-204ENST00000422869 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
CTCFL-204ENST00000422869 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
CTCFL-204ENST00000422869 RAB3GAP2Q9H2M9 1393 aa18.19■□□□□ 0.5
CTCFL-204ENST00000422869 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
CTCFL-204ENST00000422869 BCANQ96GW7 911 aa18.18■□□□□ 0.5
CTCFL-204ENST00000422869 ITGAEP38570 1179 aa18.15■□□□□ 0.5
CTCFL-204ENST00000422869 FKBP8Q14318 412 aa18.15■□□□□ 0.5
CTCFL-204ENST00000422869 WDR97A6NE52 1622 aa18.14■□□□□ 0.5
CTCFL-204ENST00000422869 CUX1P39880 1505 aa18.14■□□□□ 0.49
CTCFL-204ENST00000422869 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
CTCFL-204ENST00000422869 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
CTCFL-204ENST00000422869 TIAM1Q13009 1591 aa18.08■□□□□ 0.49
CTCFL-204ENST00000422869 SETD5Q9C0A6 1442 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms