Protein–RNA interactions for Protein: Q6EEV6

SUMO4, Small ubiquitin-related modifier 4, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO4Q6EEV6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO4Q6EEV6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 AL162741.1-201ENST00000565563 1558 ntBASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 AL121829.2-201ENST00000620908 328 ntBASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SUMO4Q6EEV6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 TSPY23P-201ENST00000440136 739 ntBASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 CDCA4P2-201ENST00000441182 718 ntBASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 AC026185.1-201ENST00000445748 174 ntBASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 MIR5787-201ENST00000611784 55 ntBASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 HLA-B-256ENST00000639848 1089 ntBASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 AP000997.3-201ENST00000623333 2250 ntBASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SUMO4Q6EEV6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms