Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 TNNT1-217ENST00000593194 721 ntAPPRIS ALT2 TSL 216.74■□□□□ 0.271e-7■■□□□ 11.4
SRSF1Q07955 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.256e-9■■□□□ 11.4
SRSF1Q07955 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.63■□□□□ 0.256e-9■■□□□ 11.4
SRSF1Q07955 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.63■□□□□ 0.256e-9■■□□□ 11.4
SRSF1Q07955 LAMTOR5-202ENST00000464240 1830 ntTSL 216.4■□□□□ 0.226e-9■■□□□ 11.4
SRSF1Q07955 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.211e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-207ENST00000587089 880 ntTSL 515.02■□□□□ -01e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15□□□□□ -0.011e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.011e-7■■□□□ 11.4
SRSF1Q07955 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.71□□□□□ -0.056e-9■■□□□ 11.4
SRSF1Q07955 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.121e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-214ENST00000589745 529 ntTSL 214.18□□□□□ -0.141e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.141e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-216ENST00000593046 800 ntTSL 213.26□□□□□ -0.291e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-210ENST00000588147 489 ntTSL 1 (best)12.76□□□□□ -0.371e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-215ENST00000592920 583 ntTSL 512.72□□□□□ -0.371e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.411e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-213ENST00000589226 604 ntTSL 212.45□□□□□ -0.421e-7■■□□□ 11.4
SRSF1Q07955 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC11.28□□□□□ -0.66e-9■■□□□ 11.4
SRSF1Q07955 TARDBP-231ENST00000639599 1283 ntTSL 514.29□□□□□ -0.123e-8■■□□□ 11.4
SRSF1Q07955 TARDBP-221ENST00000619555 682 ntTSL 510.89□□□□□ -0.673e-8■■□□□ 11.4
SRSF1Q07955 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC10.19□□□□□ -0.783e-8■■□□□ 11.4
SRSF1Q07955 TARDBP-223ENST00000620632 706 ntTSL 39.89□□□□□ -0.833e-8■■□□□ 11.4
SRSF1Q07955 TARDBP-211ENST00000610369 563 ntTSL 59.23□□□□□ -0.933e-8■■□□□ 11.4
SRSF1Q07955 TARDBP-206ENST00000473869 1946 ntTSL 59.06□□□□□ -0.963e-8■■□□□ 11.4
SRSF1Q07955 TARDBP-213ENST00000611963 739 ntTSL 57.12□□□□□ -1.273e-8■■□□□ 11.4
SRSF1Q07955 EPS8L2-207ENST00000526651 572 ntTSL 416.4■□□□□ 0.224e-7■■□□□ 11.4
SRSF1Q07955 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.262e-6■■□□□ 11.4
SRSF1Q07955 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC22.53■■□□□ 1.22e-6■■□□□ 11.4
SRSF1Q07955 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.71■□□□□ 0.912e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.08■□□□□ 0.812e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-206ENST00000559368 642 ntTSL 320.08■□□□□ 0.812e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-205ENST00000558945 1269 ntTSL 520.08■□□□□ 0.812e-6■■□□□ 11.4
SRSF1Q07955 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)19.54■□□□□ 0.722e-6■■□□□ 11.4
SRSF1Q07955 FUOM-205ENST00000465384 867 ntTSL 219.03■□□□□ 0.642e-6■■□□□ 11.4
SRSF1Q07955 LAD1-207ENST00000632743 565 ntTSL 418.66■□□□□ 0.582e-6■■□□□ 11.4
SRSF1Q07955 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.19■□□□□ 0.52e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.16■□□□□ 0.52e-6■■□□□ 11.4
SRSF1Q07955 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.75■□□□□ 0.432e-6■■□□□ 11.4
SRSF1Q07955 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.392e-6■■□□□ 11.4
SRSF1Q07955 DHX16-203ENST00000415603 892 ntTSL 317.24■□□□□ 0.352e-6■■□□□ 11.4
SRSF1Q07955 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.312e-6■■□□□ 11.4
SRSF1Q07955 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.262e-6■■□□□ 11.4
SRSF1Q07955 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.12■□□□□ 0.172e-6■■□□□ 11.4
SRSF1Q07955 LAD1-206ENST00000631576 550 ntTSL 415.69■□□□□ 0.12e-6■■□□□ 11.4
SRSF1Q07955 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.36■□□□□ 0.052e-6■■□□□ 11.4
SRSF1Q07955 ACTN4-211ENST00000589528 441 ntTSL 215.35■□□□□ 0.052e-6■■□□□ 11.4
SRSF1Q07955 LAD1-208ENST00000633953 589 ntAPPRIS P1 TSL 414.6□□□□□ -0.072e-6■■□□□ 11.4
SRSF1Q07955 SDCCAG3-211ENST00000486441 570 ntTSL 514.48□□□□□ -0.092e-6■■□□□ 11.4
SRSF1Q07955 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.3□□□□□ -0.122e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.12□□□□□ -0.152e-6■■□□□ 11.4
SRSF1Q07955 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.152e-6■■□□□ 11.4
SRSF1Q07955 FUOM-206ENST00000478895 445 ntTSL 313.86□□□□□ -0.192e-6■■□□□ 11.4
SRSF1Q07955 FUOM-204ENST00000447176 590 ntTSL 213.58□□□□□ -0.242e-6■■□□□ 11.4
SRSF1Q07955 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-6■■□□□ 11.4
SRSF1Q07955 UIMC1-202ENST00000417486 1248 ntTSL 213.47□□□□□ -0.252e-6■■□□□ 11.4
SRSF1Q07955 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.23□□□□□ -0.292e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-204ENST00000558457 676 ntTSL 212.83□□□□□ -0.362e-6■■□□□ 11.4
SRSF1Q07955 SDCCAG3-205ENST00000417512 626 ntTSL 212.75□□□□□ -0.372e-6■■□□□ 11.4
SRSF1Q07955 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.382e-6■■□□□ 11.4
SRSF1Q07955 RPTOR-209ENST00000575542 5536 ntTSL 1 (best)12.65□□□□□ -0.382e-6■■□□□ 11.4
SRSF1Q07955 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.432e-6■■□□□ 11.4
SRSF1Q07955 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.22□□□□□ -0.452e-6■■□□□ 11.4
SRSF1Q07955 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.2□□□□□ -0.462e-6■■□□□ 11.4
SRSF1Q07955 G2E3-210ENST00000552488 786 ntTSL 312.17□□□□□ -0.462e-6■■□□□ 11.4
SRSF1Q07955 NELFCD-207ENST00000479207 1112 ntTSL 311.92□□□□□ -0.52e-6■■□□□ 11.4
SRSF1Q07955 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)11.77□□□□□ -0.532e-6■■□□□ 11.4
SRSF1Q07955 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.642e-6■■□□□ 11.4
SRSF1Q07955 UIMC1-209ENST00000509236 619 ntTSL 510.64□□□□□ -0.712e-6■■□□□ 11.4
SRSF1Q07955 SDCCAG3-207ENST00000461693 869 ntTSL 210.5□□□□□ -0.732e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-207ENST00000560545 566 ntTSL 210.15□□□□□ -0.782e-6■■□□□ 11.4
SRSF1Q07955 RPTOR-205ENST00000573163 501 ntTSL 310.01□□□□□ -0.812e-6■■□□□ 11.4
SRSF1Q07955 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC9.98□□□□□ -0.812e-6■■□□□ 11.4
SRSF1Q07955 UIMC1-213ENST00000512031 2467 ntTSL 58.63□□□□□ -1.032e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-210ENST00000561275 821 ntTSL 38.59□□□□□ -1.032e-6■■□□□ 11.4
SRSF1Q07955 UIMC1-212ENST00000511320 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.052e-6■■□□□ 11.4
SRSF1Q07955 ACTN4-207ENST00000495553 586 ntTSL 58.46□□□□□ -1.062e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC7.36□□□□□ -1.232e-6■■□□□ 11.4
SRSF1Q07955 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.34□□□□□ -1.232e-6■■□□□ 11.4
SRSF1Q07955 UIMC1-214ENST00000515488 587 ntTSL 47.25□□□□□ -1.252e-6■■□□□ 11.4
SRSF1Q07955 NELFCD-206ENST00000478389 3581 ntTSL 27.2□□□□□ -1.262e-6■■□□□ 11.4
SRSF1Q07955 NELFCD-212ENST00000497935 666 ntTSL 25.65□□□□□ -1.52e-6■■□□□ 11.4
SRSF1Q07955 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.62□□□□□ -1.512e-6■■□□□ 11.4
SRSF1Q07955 G2E3-203ENST00000544007 1003 ntTSL 24.85□□□□□ -1.632e-6■■□□□ 11.4
SRSF1Q07955 OIP5-AS1-203ENST00000557993 1482 ntTSL 24.84□□□□□ -1.632e-6■■□□□ 11.4
SRSF1Q07955 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.822e-6■■□□□ 11.4
SRSF1Q07955 G2E3-209ENST00000550944 565 ntTSL 23.6□□□□□ -1.832e-6■■□□□ 11.4
SRSF1Q07955 MATR3-221ENST00000513121 573 ntTSL 218.22■□□□□ 0.516e-8■■□□□ 11.4
SRSF1Q07955 MATR3-225ENST00000514528 532 ntTSL 417.15■□□□□ 0.346e-8■■□□□ 11.4
SRSF1Q07955 MATR3-220ENST00000512876 575 ntTSL 316.17■□□□□ 0.186e-8■■□□□ 11.4
SRSF1Q07955 MATR3-222ENST00000513678 444 ntTSL 216.17■□□□□ 0.186e-8■■□□□ 11.4
SRSF1Q07955 MATR3-208ENST00000504045 1530 ntTSL 515.89■□□□□ 0.136e-8■■□□□ 11.4
SRSF1Q07955 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.41■□□□□ 0.066e-8■■□□□ 11.4
SRSF1Q07955 MATR3-213ENST00000508689 561 ntTSL 415.36■□□□□ 0.056e-8■■□□□ 11.4
SRSF1Q07955 MATR3-231ENST00000502394 589 ntTSL 410.42□□□□□ -0.746e-8■■□□□ 11.4
SRSF1Q07955 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.796e-8■■□□□ 11.4
SRSF1Q07955 MATR3-224ENST00000514488 564 ntTSL 48.97□□□□□ -0.976e-8■■□□□ 11.4
SRSF1Q07955 MATR3-205ENST00000503340 696 ntTSL 38.35□□□□□ -1.076e-8■■□□□ 11.4
SRSF1Q07955 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.73□□□□□ -1.176e-8■■□□□ 11.4
SRSF1Q07955 MATR3-210ENST00000504643 2560 ntTSL 27.63□□□□□ -1.196e-8■■□□□ 11.4
Retrieved 100 of 14,836 protein–RNA pairs in 106.7 ms