RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.54
TARDBP-206ENST00000473869 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
TARDBP-206ENST00000473869 ABCC9O60706 1549 aa20.71■□□□□ 0.91
TARDBP-206ENST00000473869 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
TARDBP-206ENST00000473869 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
TARDBP-206ENST00000473869 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
TARDBP-206ENST00000473869 MYO15BQ96JP2 1530 aa20.17■□□□□ 0.82
TARDBP-206ENST00000473869 NACADO15069 1562 aa20.12■□□□□ 0.81
TARDBP-206ENST00000473869 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
TARDBP-206ENST00000473869 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
TARDBP-206ENST00000473869 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
TARDBP-206ENST00000473869 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
TARDBP-206ENST00000473869 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
TARDBP-206ENST00000473869 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
TARDBP-206ENST00000473869 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
TARDBP-206ENST00000473869 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
TARDBP-206ENST00000473869 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
TARDBP-206ENST00000473869 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-206ENST00000473869 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
TARDBP-206ENST00000473869 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
TARDBP-206ENST00000473869 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
TARDBP-206ENST00000473869 WIZO95785 1651 aa18.88■□□□□ 0.61
TARDBP-206ENST00000473869 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
TARDBP-206ENST00000473869 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
TARDBP-206ENST00000473869 TOP2AP11388 1531 aaKnown RBP18.68■□□□□ 0.58
TARDBP-206ENST00000473869 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
TARDBP-206ENST00000473869 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
TARDBP-206ENST00000473869 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
TARDBP-206ENST00000473869 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
TARDBP-206ENST00000473869 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
TARDBP-206ENST00000473869 HMGXB3Q12766 1538 aa18.52■□□□□ 0.55
TARDBP-206ENST00000473869 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
TARDBP-206ENST00000473869 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
TARDBP-206ENST00000473869 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
TARDBP-206ENST00000473869 CFTRP13569 1480 aa18.09■□□□□ 0.49
TARDBP-206ENST00000473869 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
TARDBP-206ENST00000473869 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
TARDBP-206ENST00000473869 NESP48681 1621 aa18.06■□□□□ 0.48
TARDBP-206ENST00000473869 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
TARDBP-206ENST00000473869 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
TARDBP-206ENST00000473869 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
TARDBP-206ENST00000473869 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
TARDBP-206ENST00000473869 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
TARDBP-206ENST00000473869 PDS5BQ9NTI5 1447 aa17.88■□□□□ 0.45
TARDBP-206ENST00000473869 KIF21AQ7Z4S6 1674 aa17.85■□□□□ 0.45
TARDBP-206ENST00000473869 TOP2BQ02880 1626 aa17.84■□□□□ 0.45
TARDBP-206ENST00000473869 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
TARDBP-206ENST00000473869 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
TARDBP-206ENST00000473869 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
TARDBP-206ENST00000473869 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
TARDBP-206ENST00000473869 CUX1P39880 1505 aa17.8■□□□□ 0.44
TARDBP-206ENST00000473869 SOGA1O94964 1423 aa17.72■□□□□ 0.43
TARDBP-206ENST00000473869 EEA1Q15075 1411 aa17.71■□□□□ 0.43
TARDBP-206ENST00000473869 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.43
TARDBP-206ENST00000473869 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
TARDBP-206ENST00000473869 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
TARDBP-206ENST00000473869 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
TARDBP-206ENST00000473869 TOPBP1Q92547 1522 aa17.65■□□□□ 0.42
TARDBP-206ENST00000473869 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
TARDBP-206ENST00000473869 THOC2Q8NI27 1593 aaKnown RBP17.63■□□□□ 0.41
TARDBP-206ENST00000473869 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
TARDBP-206ENST00000473869 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
TARDBP-206ENST00000473869 WDR62O43379 1518 aa17.59■□□□□ 0.41
TARDBP-206ENST00000473869 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
TARDBP-206ENST00000473869 KIF27Q86VH2 1401 aa17.56■□□□□ 0.4
TARDBP-206ENST00000473869 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
TARDBP-206ENST00000473869 CUX2O14529 1486 aa17.52■□□□□ 0.4
TARDBP-206ENST00000473869 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
TARDBP-206ENST00000473869 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
TARDBP-206ENST00000473869 KIF21BO75037 1637 aa17.47■□□□□ 0.39
TARDBP-206ENST00000473869 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
TARDBP-206ENST00000473869 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
TARDBP-206ENST00000473869 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
TARDBP-206ENST00000473869 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
TARDBP-206ENST00000473869 WDR97A6NE52 1622 aa17.4■□□□□ 0.38
TARDBP-206ENST00000473869 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
TARDBP-206ENST00000473869 IGF1RP08069 1367 aa17.39■□□□□ 0.37
TARDBP-206ENST00000473869 TNIKQ9UKE5 1360 aa17.38■□□□□ 0.37
TARDBP-206ENST00000473869 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
TARDBP-206ENST00000473869 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
TARDBP-206ENST00000473869 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
TARDBP-206ENST00000473869 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
TARDBP-206ENST00000473869 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.36
TARDBP-206ENST00000473869 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
TARDBP-206ENST00000473869 GAPVD1Q14C86 1478 aa17.32■□□□□ 0.36
TARDBP-206ENST00000473869 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.362e-7■■□□□ 14.3
TARDBP-206ENST00000473869 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
TARDBP-206ENST00000473869 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
TARDBP-206ENST00000473869 CUL7Q14999 1698 aa17.27■□□□□ 0.36
TARDBP-206ENST00000473869 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
TARDBP-206ENST00000473869 GRIN2BQ13224 1484 aa17.2■□□□□ 0.34
TARDBP-206ENST00000473869 CLIP1P30622 1438 aa17.18■□□□□ 0.34
TARDBP-206ENST00000473869 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
TARDBP-206ENST00000473869 SNAPC4Q5SXM2 1469 aa17.15■□□□□ 0.34
TARDBP-206ENST00000473869 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
TARDBP-206ENST00000473869 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
TARDBP-206ENST00000473869 MAGI1Q96QZ7 1491 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-206ENST00000473869 CTTNBP2Q8WZ74 1663 aa17.07■□□□□ 0.32
TARDBP-206ENST00000473869 FBLN2P98095 1184 aa17.06■□□□□ 0.32
TARDBP-206ENST00000473869 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms