RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
MATR3-224ENST00000514488 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
MATR3-224ENST00000514488 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
MATR3-224ENST00000514488 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
MATR3-224ENST00000514488 FOXD1Q16676 465 aa24.23■■□□□ 1.47
MATR3-224ENST00000514488 PLPPR3Q6T4P5 718 aa23.85■■□□□ 1.41
MATR3-224ENST00000514488 PPP6R1Q9UPN7 881 aa22.98■■□□□ 1.27
MATR3-224ENST00000514488 ADRA2BP18089 450 aa22.94■■□□□ 1.26
MATR3-224ENST00000514488 PIAS4Q8N2W9 510 aaPredicted RBP22.77■■□□□ 1.24
MATR3-224ENST00000514488 MSH5O43196 834 aa22.56■■□□□ 1.2
MATR3-224ENST00000514488 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
MATR3-224ENST00000514488 POTEDQ86YR6 584 aa21.18■□□□□ 0.98
MATR3-224ENST00000514488 SCAF1Q9H7N4 1312 aaKnown RBP21.06■□□□□ 0.96
MATR3-224ENST00000514488 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
MATR3-224ENST00000514488 MAPK8IP2Q13387 824 aaPredicted RBP20.91■□□□□ 0.94
MATR3-224ENST00000514488 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.92
MATR3-224ENST00000514488 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
MATR3-224ENST00000514488 ABCC9O60706 1549 aa20.34■□□□□ 0.85
MATR3-224ENST00000514488 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
MATR3-224ENST00000514488 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
MATR3-224ENST00000514488 RNF216Q9NWF9 866 aaPredicted RBP20.17■□□□□ 0.82
MATR3-224ENST00000514488 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
MATR3-224ENST00000514488 KCNA4P22459 653 aa19.98■□□□□ 0.79
MATR3-224ENST00000514488 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
MATR3-224ENST00000514488 DCAF8L1A6NGE4 600 aa19.83■□□□□ 0.77
MATR3-224ENST00000514488 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
MATR3-224ENST00000514488 RNF39Q9H2S5 420 aa19.27■□□□□ 0.68
MATR3-224ENST00000514488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.67
MATR3-224ENST00000514488 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
MATR3-224ENST00000514488 C1QBPQ07021 282 aaKnown RBP19.04■□□□□ 0.64
MATR3-224ENST00000514488 CACNB1Q02641 598 aaPredicted RBP19.03■□□□□ 0.64
MATR3-224ENST00000514488 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
MATR3-224ENST00000514488 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
MATR3-224ENST00000514488 NACADO15069 1562 aa18.87■□□□□ 0.61
MATR3-224ENST00000514488 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
MATR3-224ENST00000514488 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
MATR3-224ENST00000514488 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
MATR3-224ENST00000514488 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
MATR3-224ENST00000514488 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.57
MATR3-224ENST00000514488 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
MATR3-224ENST00000514488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
MATR3-224ENST00000514488 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
MATR3-224ENST00000514488 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
MATR3-224ENST00000514488 APLP2Q06481 763 aa18.45■□□□□ 0.54
MATR3-224ENST00000514488 SAMD1Q6SPF0 538 aaPredicted RBP18.45■□□□□ 0.54
MATR3-224ENST00000514488 SPINK5Q9NQ38 1064 aaPredicted RBP18.42■□□□□ 0.54
MATR3-224ENST00000514488 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
MATR3-224ENST00000514488 CAPN15O75808 1086 aa18.38■□□□□ 0.53
MATR3-224ENST00000514488 ZBTB22O15209 634 aa18.37■□□□□ 0.53
MATR3-224ENST00000514488 CC2D2AQ9P2K1 1620 aa18.35■□□□□ 0.53
MATR3-224ENST00000514488 CECR2Q9BXF3 1484 aa18.33■□□□□ 0.53
MATR3-224ENST00000514488 ZNF219Q9P2Y4 722 aaPredicted RBP18.24■□□□□ 0.51
MATR3-224ENST00000514488 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
MATR3-224ENST00000514488 TRHP20396 242 aaPredicted RBP18.19■□□□□ 0.5
MATR3-224ENST00000514488 DSG3P32926 999 aa18.19■□□□□ 0.5
MATR3-224ENST00000514488 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
MATR3-224ENST00000514488 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
MATR3-224ENST00000514488 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
MATR3-224ENST00000514488 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.48
MATR3-224ENST00000514488 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
MATR3-224ENST00000514488 ABCB7O75027 752 aa17.98■□□□□ 0.47
MATR3-224ENST00000514488 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
MATR3-224ENST00000514488 ATXN8OSP0DMR3 200 aa17.96■□□□□ 0.47
MATR3-224ENST00000514488 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
MATR3-224ENST00000514488 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
MATR3-224ENST00000514488 POLA2Q14181 598 aa17.81■□□□□ 0.44
MATR3-224ENST00000514488 CUX2O14529 1486 aa17.62■□□□□ 0.41
MATR3-224ENST00000514488 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
MATR3-224ENST00000514488 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
MATR3-224ENST00000514488 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
MATR3-224ENST00000514488 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
MATR3-224ENST00000514488 NESP48681 1621 aa17.38■□□□□ 0.37
MATR3-224ENST00000514488 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
MATR3-224ENST00000514488 FBLN2P98095 1184 aa17.3■□□□□ 0.36
MATR3-224ENST00000514488 THOC2Q8NI27 1593 aaKnown RBP17.27■□□□□ 0.35
MATR3-224ENST00000514488 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
MATR3-224ENST00000514488 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
MATR3-224ENST00000514488 SMARCA2P51531 1590 aa17.25■□□□□ 0.35
MATR3-224ENST00000514488 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
MATR3-224ENST00000514488 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
MATR3-224ENST00000514488 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
MATR3-224ENST00000514488 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
MATR3-224ENST00000514488 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
MATR3-224ENST00000514488 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
MATR3-224ENST00000514488 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
MATR3-224ENST00000514488 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
MATR3-224ENST00000514488 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
MATR3-224ENST00000514488 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
MATR3-224ENST00000514488 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
MATR3-224ENST00000514488 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
MATR3-224ENST00000514488 PDS5BQ9NTI5 1447 aa17■□□□□ 0.31
MATR3-224ENST00000514488 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
MATR3-224ENST00000514488 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
MATR3-224ENST00000514488 WDR62O43379 1518 aa16.91■□□□□ 0.3
MATR3-224ENST00000514488 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
MATR3-224ENST00000514488 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
MATR3-224ENST00000514488 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
MATR3-224ENST00000514488 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
MATR3-224ENST00000514488 CHRDL2Q6WN34 429 aa16.78■□□□□ 0.28
MATR3-224ENST00000514488 WIZO95785 1651 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms