RNA–Protein interactions for RNA: ENST00000461693.5

SDCCAG3-207, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-207ENST00000461693 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
SDCCAG3-207ENST00000461693 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
SDCCAG3-207ENST00000461693 ABCC9O60706 1549 aa24.16■■□□□ 1.46
SDCCAG3-207ENST00000461693 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
SDCCAG3-207ENST00000461693 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
SDCCAG3-207ENST00000461693 NACADO15069 1562 aa23.61■■□□□ 1.37
SDCCAG3-207ENST00000461693 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
SDCCAG3-207ENST00000461693 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
SDCCAG3-207ENST00000461693 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
SDCCAG3-207ENST00000461693 UNC13AQ9UPW8 1703 aa22.89■■□□□ 1.26
SDCCAG3-207ENST00000461693 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
SDCCAG3-207ENST00000461693 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
SDCCAG3-207ENST00000461693 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
SDCCAG3-207ENST00000461693 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
SDCCAG3-207ENST00000461693 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
SDCCAG3-207ENST00000461693 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
SDCCAG3-207ENST00000461693 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
SDCCAG3-207ENST00000461693 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
SDCCAG3-207ENST00000461693 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
SDCCAG3-207ENST00000461693 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
SDCCAG3-207ENST00000461693 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
SDCCAG3-207ENST00000461693 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
SDCCAG3-207ENST00000461693 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
SDCCAG3-207ENST00000461693 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
SDCCAG3-207ENST00000461693 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
SDCCAG3-207ENST00000461693 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
SDCCAG3-207ENST00000461693 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
SDCCAG3-207ENST00000461693 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
SDCCAG3-207ENST00000461693 WIZO95785 1651 aa21.53■■□□□ 1.04
SDCCAG3-207ENST00000461693 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
SDCCAG3-207ENST00000461693 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
SDCCAG3-207ENST00000461693 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
SDCCAG3-207ENST00000461693 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.96
SDCCAG3-207ENST00000461693 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
SDCCAG3-207ENST00000461693 CFTRP13569 1480 aa21.03■□□□□ 0.96
SDCCAG3-207ENST00000461693 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
SDCCAG3-207ENST00000461693 PRDM2Q13029 1718 aa20.96■□□□□ 0.95
SDCCAG3-207ENST00000461693 NESP48681 1621 aa20.96■□□□□ 0.95
SDCCAG3-207ENST00000461693 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
SDCCAG3-207ENST00000461693 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
SDCCAG3-207ENST00000461693 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
SDCCAG3-207ENST00000461693 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
SDCCAG3-207ENST00000461693 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
SDCCAG3-207ENST00000461693 MRC2Q9UBG0 1479 aa20.73■□□□□ 0.91
SDCCAG3-207ENST00000461693 CUX2O14529 1486 aa20.69■□□□□ 0.9
SDCCAG3-207ENST00000461693 WDR62O43379 1518 aa20.68■□□□□ 0.9
SDCCAG3-207ENST00000461693 ABCC8Q09428 1581 aa20.67■□□□□ 0.9
SDCCAG3-207ENST00000461693 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
SDCCAG3-207ENST00000461693 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
SDCCAG3-207ENST00000461693 TOPBP1Q92547 1522 aa20.52■□□□□ 0.87
SDCCAG3-207ENST00000461693 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
SDCCAG3-207ENST00000461693 CUX1P39880 1505 aa20.43■□□□□ 0.86
SDCCAG3-207ENST00000461693 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
SDCCAG3-207ENST00000461693 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
SDCCAG3-207ENST00000461693 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
SDCCAG3-207ENST00000461693 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
SDCCAG3-207ENST00000461693 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
SDCCAG3-207ENST00000461693 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.85
SDCCAG3-207ENST00000461693 SYNJ1O43426 1573 aa20.32■□□□□ 0.84
SDCCAG3-207ENST00000461693 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
SDCCAG3-207ENST00000461693 SOGA1O94964 1423 aa20.25■□□□□ 0.83
SDCCAG3-207ENST00000461693 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
SDCCAG3-207ENST00000461693 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
SDCCAG3-207ENST00000461693 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
SDCCAG3-207ENST00000461693 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
SDCCAG3-207ENST00000461693 ABCA5Q8WWZ7 1642 aa20.11■□□□□ 0.81
SDCCAG3-207ENST00000461693 GRIN2BQ13224 1484 aa20.06■□□□□ 0.8
SDCCAG3-207ENST00000461693 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
SDCCAG3-207ENST00000461693 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
SDCCAG3-207ENST00000461693 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
SDCCAG3-207ENST00000461693 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.81e-8■■■■□ 24.2
SDCCAG3-207ENST00000461693 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
SDCCAG3-207ENST00000461693 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
SDCCAG3-207ENST00000461693 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
SDCCAG3-207ENST00000461693 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.79
SDCCAG3-207ENST00000461693 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
SDCCAG3-207ENST00000461693 CUL7Q14999 1698 aa19.91■□□□□ 0.78
SDCCAG3-207ENST00000461693 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
SDCCAG3-207ENST00000461693 EEA1Q15075 1411 aa19.91■□□□□ 0.78
SDCCAG3-207ENST00000461693 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
SDCCAG3-207ENST00000461693 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
SDCCAG3-207ENST00000461693 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
SDCCAG3-207ENST00000461693 CHD1O14646 1710 aa19.82■□□□□ 0.76
SDCCAG3-207ENST00000461693 IGF1RP08069 1367 aa19.81■□□□□ 0.76
SDCCAG3-207ENST00000461693 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
SDCCAG3-207ENST00000461693 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
SDCCAG3-207ENST00000461693 OSCARQ8IYS5 282 aa19.75■□□□□ 0.75
SDCCAG3-207ENST00000461693 CARMIL1Q5VZK9 1371 aa19.72■□□□□ 0.75
SDCCAG3-207ENST00000461693 NUP160Q12769 1436 aa19.7■□□□□ 0.74
SDCCAG3-207ENST00000461693 FBLN2P98095 1184 aa19.7■□□□□ 0.74
SDCCAG3-207ENST00000461693 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
SDCCAG3-207ENST00000461693 RAPGEF2Q9Y4G8 1499 aa19.69■□□□□ 0.74
SDCCAG3-207ENST00000461693 PRXQ9BXM0 1461 aa19.68■□□□□ 0.74
SDCCAG3-207ENST00000461693 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
SDCCAG3-207ENST00000461693 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
SDCCAG3-207ENST00000461693 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
SDCCAG3-207ENST00000461693 KIF21BO75037 1637 aa19.62■□□□□ 0.73
SDCCAG3-207ENST00000461693 KIAA0586Q9BVV6 1533 aa19.58■□□□□ 0.73
SDCCAG3-207ENST00000461693 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
SDCCAG3-207ENST00000461693 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms