RNA–Protein interactions for RNA: ENST00000575542.5

RPTOR-209, Transcript of regulatory associated protein of MTOR complex 1, humanhuman

TSL 1 (best)

Gene RPTOR, Length 5,536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPTOR-209ENST00000575542 NISCHQ9Y2I1 1504 aa26.96■■□□□ 1.91
RPTOR-209ENST00000575542 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
RPTOR-209ENST00000575542 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
RPTOR-209ENST00000575542 SHROOM4Q9ULL8 1493 aa25.3■■□□□ 1.64
RPTOR-209ENST00000575542 EHMT2Q96KQ7 1210 aa24.36■■□□□ 1.49
RPTOR-209ENST00000575542 APLP2Q06481 763 aa24.34■■□□□ 1.49
RPTOR-209ENST00000575542 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
RPTOR-209ENST00000575542 PELP1Q8IZL8 1130 aaKnown RBP23.96■■□□□ 1.43
RPTOR-209ENST00000575542 TRIM41Q8WV44 630 aa23.94■■□□□ 1.42
RPTOR-209ENST00000575542 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
RPTOR-209ENST00000575542 ZEB1P37275 1124 aaPredicted RBP23.73■■□□□ 1.39
RPTOR-209ENST00000575542 TTBK1Q5TCY1 1321 aaPredicted RBP23.57■■□□□ 1.36
RPTOR-209ENST00000575542 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.35
RPTOR-209ENST00000575542 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
RPTOR-209ENST00000575542 CCER1Q8TC90 406 aaPredicted RBP23.43■■□□□ 1.34
RPTOR-209ENST00000575542 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
RPTOR-209ENST00000575542 ATP1B4Q9UN42 357 aaPredicted RBP23.31■■□□□ 1.32
RPTOR-209ENST00000575542 TRIM26Q12899 539 aaPredicted RBP23.13■■□□□ 1.29
RPTOR-209ENST00000575542 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.28
RPTOR-209ENST00000575542 ABCC9O60706 1549 aa22.84■■□□□ 1.25
RPTOR-209ENST00000575542 PPARGC1BQ86YN6 1023 aaKnown RBP22.83■■□□□ 1.24
RPTOR-209ENST00000575542 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
RPTOR-209ENST00000575542 HRCP23327 699 aa22.77■■□□□ 1.24
RPTOR-209ENST00000575542 NEFLP07196 543 aa22.76■■□□□ 1.23
RPTOR-209ENST00000575542 ERICH6Q7L0X2 663 aa22.72■■□□□ 1.23
RPTOR-209ENST00000575542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.58■■□□□ 1.21
RPTOR-209ENST00000575542 HNRNPUL2Q1KMD3 747 aaKnown RBP22.58■■□□□ 1.21
RPTOR-209ENST00000575542 YTHDC1Q96MU7 727 aaKnown RBP22.58■■□□□ 1.21
RPTOR-209ENST00000575542 ITGAEP38570 1179 aa22.55■■□□□ 1.2
RPTOR-209ENST00000575542 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
RPTOR-209ENST00000575542 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.18
RPTOR-209ENST00000575542 MYT1LQ9UL68 1186 aa22.37■■□□□ 1.17
RPTOR-209ENST00000575542 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
RPTOR-209ENST00000575542 MYT1Q01538 1121 aa22.24■■□□□ 1.15
RPTOR-209ENST00000575542 POLR3GLQ9BT43 218 aa22.19■■□□□ 1.14
RPTOR-209ENST00000575542 FAM50AQ14320 339 aaKnown RBP22.17■■□□□ 1.14
RPTOR-209ENST00000575542 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
RPTOR-209ENST00000575542 DIEXFQ68CQ4 756 aaKnown RBP22.1■■□□□ 1.13
RPTOR-209ENST00000575542 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
RPTOR-209ENST00000575542 TRIM52Q96A61 297 aa22■■□□□ 1.11
RPTOR-209ENST00000575542 DAXXQ9UER7 740 aaPredicted RBP21.93■■□□□ 1.1
RPTOR-209ENST00000575542 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
RPTOR-209ENST00000575542 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
RPTOR-209ENST00000575542 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
RPTOR-209ENST00000575542 FBLN2P98095 1184 aa21.78■■□□□ 1.08
RPTOR-209ENST00000575542 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
RPTOR-209ENST00000575542 SLC4A1APQ9BWU0 796 aaKnown RBP21.77■■□□□ 1.07
RPTOR-209ENST00000575542 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
RPTOR-209ENST00000575542 ANP32CO43423 234 aa21.74■■□□□ 1.07
RPTOR-209ENST00000575542 CDK11AQ9UQ88 783 aaPredicted RBP21.71■■□□□ 1.07
RPTOR-209ENST00000575542 P3H3Q8IVL6 736 aa21.67■■□□□ 1.06
RPTOR-209ENST00000575542 NACADO15069 1562 aa21.65■■□□□ 1.06
RPTOR-209ENST00000575542 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
RPTOR-209ENST00000575542 EEA1Q15075 1411 aa21.52■■□□□ 1.03
RPTOR-209ENST00000575542 CLSPNQ9HAW4 1339 aa21.51■■□□□ 1.03
RPTOR-209ENST00000575542 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
RPTOR-209ENST00000575542 ARID3CA6NKF2 412 aa21.45■■□□□ 1.02
RPTOR-209ENST00000575542 ZNF777Q9ULD5 760 aaPredicted RBP21.44■■□□□ 1.02
RPTOR-209ENST00000575542 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
RPTOR-209ENST00000575542 RTL5Q5HYW3 569 aaPredicted RBP21.42■■□□□ 1.02
RPTOR-209ENST00000575542 TONSLQ96HA7 1378 aa21.4■■□□□ 1.02
RPTOR-209ENST00000575542 CLIP1P30622 1438 aa21.36■■□□□ 1.01
RPTOR-209ENST00000575542 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
RPTOR-209ENST00000575542 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
RPTOR-209ENST00000575542 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
RPTOR-209ENST00000575542 NEFMP07197 916 aa21.28■■□□□ 1
RPTOR-209ENST00000575542 BCANQ96GW7 911 aa21.27■■□□□ 1
RPTOR-209ENST00000575542 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 19e-6■■■■■ 50.1
RPTOR-209ENST00000575542 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
RPTOR-209ENST00000575542 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
RPTOR-209ENST00000575542 ZBTB47Q9UFB7 747 aaPredicted RBP21.25■□□□□ 0.99
RPTOR-209ENST00000575542 NPM1P06748 294 aaKnown RBP eCLIP21.21■□□□□ 0.99
RPTOR-209ENST00000575542 CEP162Q5TB80 1403 aa21.2■□□□□ 0.98
RPTOR-209ENST00000575542 CANXP27824 592 aaKnown RBP21.2■□□□□ 0.98
RPTOR-209ENST00000575542 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
RPTOR-209ENST00000575542 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
RPTOR-209ENST00000575542 TNIKQ9UKE5 1360 aa21.15■□□□□ 0.98
RPTOR-209ENST00000575542 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.98
RPTOR-209ENST00000575542 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
RPTOR-209ENST00000575542 TSPY4P0CV99 314 aa21.13■□□□□ 0.97
RPTOR-209ENST00000575542 TSPY10P0CW01 314 aa21.13■□□□□ 0.97
RPTOR-209ENST00000575542 ESF1Q9H501 851 aaKnown RBP21.12■□□□□ 0.97
RPTOR-209ENST00000575542 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
RPTOR-209ENST00000575542 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
RPTOR-209ENST00000575542 CHGAP10645 457 aaKnown RBP21■□□□□ 0.95
RPTOR-209ENST00000575542 STAG3Q9UJ98 1225 aa21■□□□□ 0.95
RPTOR-209ENST00000575542 HNRNPUQ00839 825 aaKnown RBP eCLIP20.98■□□□□ 0.95
RPTOR-209ENST00000575542 ANP32AP39687 249 aaKnown RBP20.97■□□□□ 0.95
RPTOR-209ENST00000575542 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
RPTOR-209ENST00000575542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.942e-6■■□□□ 13.2
RPTOR-209ENST00000575542 PLEKHD1A6NEE1 506 aa20.92■□□□□ 0.94
RPTOR-209ENST00000575542 SLC24A1O60721 1099 aa20.91■□□□□ 0.94
RPTOR-209ENST00000575542 FKBP8Q14318 412 aa20.91■□□□□ 0.94
RPTOR-209ENST00000575542 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
RPTOR-209ENST00000575542 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
RPTOR-209ENST00000575542 EIF4G2P78344 907 aaKnown RBP eCLIP20.89■□□□□ 0.933e-8■■■■■ 63.8
RPTOR-209ENST00000575542 RRP7BPQ9NSQ0 103 aa20.85■□□□□ 0.93
RPTOR-209ENST00000575542 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
RPTOR-209ENST00000575542 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.82■□□□□ 0.92
RPTOR-209ENST00000575542 MRS2Q9HD23 443 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms