Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT2P35908 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT2P35908 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
KRT2P35908 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT2P35908 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
KRT2P35908 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT2P35908 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT2P35908 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.48■■□□□ 1.03
KRT2P35908 NAPSB-206ENST00000562112 1266 ntBASIC21.48■■□□□ 1.03
KRT2P35908 AC010947.1-201ENST00000623454 693 ntBASIC21.48■■□□□ 1.03
KRT2P35908 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT2P35908 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT2P35908 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT2P35908 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
KRT2P35908 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT2P35908 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KRT2P35908 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
KRT2P35908 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT2P35908 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
KRT2P35908 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT2P35908 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT2P35908 AC007663.1-201ENST00000438948 1240 ntBASIC21.47■■□□□ 1.03
KRT2P35908 EGLN1P1-201ENST00000531623 762 ntBASIC21.47■■□□□ 1.03
KRT2P35908 BX088651.1-201ENST00000540551 451 ntBASIC21.47■■□□□ 1.03
KRT2P35908 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT2P35908 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.47■■□□□ 1.03
KRT2P35908 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT2P35908 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT2P35908 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT2P35908 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT2P35908 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.47■■□□□ 1.03
KRT2P35908 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT2P35908 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
KRT2P35908 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
KRT2P35908 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.46■■□□□ 1.03
KRT2P35908 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT2P35908 AL499627.1-201ENST00000569373 2188 ntBASIC21.46■■□□□ 1.03
KRT2P35908 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT2P35908 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT2P35908 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.46■■□□□ 1.03
KRT2P35908 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT2P35908 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT2P35908 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT2P35908 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
KRT2P35908 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT2P35908 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
KRT2P35908 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
KRT2P35908 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
KRT2P35908 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
KRT2P35908 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 INGX-201ENST00000359239 846 ntBASIC21.45■■□□□ 1.02
KRT2P35908 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.45■■□□□ 1.02
KRT2P35908 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 MIR3180-5-201ENST00000583743 153 ntBASIC21.45■■□□□ 1.02
KRT2P35908 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
KRT2P35908 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
KRT2P35908 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
KRT2P35908 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.45■■□□□ 1.02
KRT2P35908 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
KRT2P35908 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KRT2P35908 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.45■■□□□ 1.02
KRT2P35908 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT2P35908 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
KRT2P35908 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KRT2P35908 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms