Protein–RNA interactions for Protein: P18085

ARF4, ADP-ribosylation factor 4, humanhuman

Predicted RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P18085 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.36■□□□□ 0.85
ARF4P18085 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.36■□□□□ 0.85
ARF4P18085 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ARF4P18085 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.35■□□□□ 0.85
ARF4P18085 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 IER3-202ENST00000376377 1350 ntBASIC20.35■□□□□ 0.85
ARF4P18085 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ARF4P18085 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 UPK3BP1-201ENST00000428678 509 ntBASIC20.35■□□□□ 0.85
ARF4P18085 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.35■□□□□ 0.85
ARF4P18085 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 VENTXP5-201ENST00000523979 775 ntBASIC20.35■□□□□ 0.85
ARF4P18085 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.35■□□□□ 0.85
ARF4P18085 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.35■□□□□ 0.85
ARF4P18085 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.35■□□□□ 0.85
ARF4P18085 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.35■□□□□ 0.85
ARF4P18085 AC079602.3-201ENST00000623931 403 ntBASIC20.35■□□□□ 0.85
ARF4P18085 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ARF4P18085 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.35■□□□□ 0.85
ARF4P18085 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ARF4P18085 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ARF4P18085 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.35■□□□□ 0.85
ARF4P18085 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.35■□□□□ 0.85
ARF4P18085 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.35■□□□□ 0.85
ARF4P18085 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ARF4P18085 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARF4P18085 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.34■□□□□ 0.85
ARF4P18085 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 AL357033.4-201ENST00000617703 1807 ntBASIC20.34■□□□□ 0.85
ARF4P18085 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.34■□□□□ 0.85
ARF4P18085 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.34■□□□□ 0.85
ARF4P18085 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ARF4P18085 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.34■□□□□ 0.85
ARF4P18085 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
ARF4P18085 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.34■□□□□ 0.85
ARF4P18085 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.34■□□□□ 0.85
ARF4P18085 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ARF4P18085 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ARF4P18085 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ARF4P18085 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.34■□□□□ 0.85
ARF4P18085 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARF4P18085 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ARF4P18085 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.33■□□□□ 0.85
ARF4P18085 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.33■□□□□ 0.85
ARF4P18085 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.33■□□□□ 0.85
ARF4P18085 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARF4P18085 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.33■□□□□ 0.85
ARF4P18085 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.33■□□□□ 0.85
ARF4P18085 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ARF4P18085 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.33■□□□□ 0.85
ARF4P18085 AC010240.3-201ENST00000607688 395 ntBASIC20.33■□□□□ 0.85
ARF4P18085 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.33■□□□□ 0.85
ARF4P18085 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.33■□□□□ 0.85
ARF4P18085 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.33■□□□□ 0.85
ARF4P18085 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.33■□□□□ 0.85
ARF4P18085 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARF4P18085 Z98044.1-201ENST00000632503 1764 ntBASIC20.33■□□□□ 0.84
ARF4P18085 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ARF4P18085 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.33■□□□□ 0.84
ARF4P18085 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ARF4P18085 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARF4P18085 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ARF4P18085 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.32■□□□□ 0.84
ARF4P18085 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARF4P18085 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms