Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 TSPY21P-201ENST00000433481 731 ntBASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 TSPY23P-201ENST00000440136 739 ntBASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 MIR5787-201ENST00000611784 55 ntBASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRAV5A0A0B4J249 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV5A0A0B4J249 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV5A0A0B4J249 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.58□□□□□ -0.07
TRAV5A0A0B4J249 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV5A0A0B4J249 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV5A0A0B4J249 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 PNMA6B-201ENST00000538162 1200 ntBASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 AL121829.2-201ENST00000620908 328 ntBASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV5A0A0B4J249 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 AL121832.2-201ENST00000610979 668 ntBASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 HLA-B-256ENST00000639848 1089 ntBASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms