Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC145676.1-201ENST00000514988 2004 ntBASIC17.45■□□□□ 0.38
UBE2D4Q9Y2X8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.45■□□□□ 0.38
UBE2D4Q9Y2X8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2D4Q9Y2X8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
UBE2D4Q9Y2X8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
UBE2D4Q9Y2X8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D4Q9Y2X8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D4Q9Y2X8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.44■□□□□ 0.38
UBE2D4Q9Y2X8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UBE2D4Q9Y2X8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D4Q9Y2X8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D4Q9Y2X8 AC135983.2-203ENST00000454486 1613 ntBASIC17.43■□□□□ 0.38
UBE2D4Q9Y2X8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.43■□□□□ 0.38
UBE2D4Q9Y2X8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBE2D4Q9Y2X8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBE2D4Q9Y2X8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
UBE2D4Q9Y2X8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.43■□□□□ 0.38
UBE2D4Q9Y2X8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBE2D4Q9Y2X8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBE2D4Q9Y2X8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2D4Q9Y2X8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2D4Q9Y2X8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.42■□□□□ 0.38
UBE2D4Q9Y2X8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2D4Q9Y2X8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2D4Q9Y2X8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2D4Q9Y2X8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2D4Q9Y2X8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2D4Q9Y2X8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2D4Q9Y2X8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2D4Q9Y2X8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2D4Q9Y2X8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2D4Q9Y2X8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBE2D4Q9Y2X8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2D4Q9Y2X8 AC136428.2-201ENST00000563187 214 ntBASIC17.4■□□□□ 0.38
UBE2D4Q9Y2X8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2D4Q9Y2X8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
UBE2D4Q9Y2X8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2D4Q9Y2X8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2D4Q9Y2X8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2D4Q9Y2X8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2D4Q9Y2X8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2D4Q9Y2X8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
UBE2D4Q9Y2X8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBE2D4Q9Y2X8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UBE2D4Q9Y2X8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2D4Q9Y2X8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2D4Q9Y2X8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2D4Q9Y2X8 WHAMMP2-203ENST00000563942 1603 ntBASIC17.37■□□□□ 0.37
UBE2D4Q9Y2X8 MIR762-201ENST00000390236 83 ntBASIC17.37■□□□□ 0.37
UBE2D4Q9Y2X8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2D4Q9Y2X8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2D4Q9Y2X8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.37■□□□□ 0.37
UBE2D4Q9Y2X8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2D4Q9Y2X8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 AC020928.2-201ENST00000588717 2197 ntBASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 AC097358.2-201ENST00000607541 1159 ntBASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D4Q9Y2X8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2D4Q9Y2X8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2D4Q9Y2X8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBE2D4Q9Y2X8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2D4Q9Y2X8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.35■□□□□ 0.37
UBE2D4Q9Y2X8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
UBE2D4Q9Y2X8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2D4Q9Y2X8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2D4Q9Y2X8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2D4Q9Y2X8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2D4Q9Y2X8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2D4Q9Y2X8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2D4Q9Y2X8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2D4Q9Y2X8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.33■□□□□ 0.36
UBE2D4Q9Y2X8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.33■□□□□ 0.36
UBE2D4Q9Y2X8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.33■□□□□ 0.36
UBE2D4Q9Y2X8 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.33■□□□□ 0.36
UBE2D4Q9Y2X8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.33■□□□□ 0.36
UBE2D4Q9Y2X8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2D4Q9Y2X8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.33■□□□□ 0.36
UBE2D4Q9Y2X8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2D4Q9Y2X8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2D4Q9Y2X8 DUSP8P4-201ENST00000399538 1761 ntBASIC17.32■□□□□ 0.36
UBE2D4Q9Y2X8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2D4Q9Y2X8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2D4Q9Y2X8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2D4Q9Y2X8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.31■□□□□ 0.36
UBE2D4Q9Y2X8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2D4Q9Y2X8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
UBE2D4Q9Y2X8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBE2D4Q9Y2X8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBE2D4Q9Y2X8 AC092803.2-201ENST00000564287 1899 ntBASIC17.31■□□□□ 0.36
UBE2D4Q9Y2X8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.3■□□□□ 0.36
UBE2D4Q9Y2X8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms