Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCL1Q9Y2P8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCL1Q9Y2P8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RCL1Q9Y2P8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RCL1Q9Y2P8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RCL1Q9Y2P8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCL1Q9Y2P8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RCL1Q9Y2P8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RCL1Q9Y2P8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCL1Q9Y2P8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RCL1Q9Y2P8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCL1Q9Y2P8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCL1Q9Y2P8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCL1Q9Y2P8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCL1Q9Y2P8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCL1Q9Y2P8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.39■□□□□ 0.86
RCL1Q9Y2P8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RCL1Q9Y2P8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCL1Q9Y2P8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCL1Q9Y2P8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RCL1Q9Y2P8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCL1Q9Y2P8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCL1Q9Y2P8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RCL1Q9Y2P8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.37■□□□□ 0.85
RCL1Q9Y2P8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCL1Q9Y2P8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RCL1Q9Y2P8 AC018358.1-201ENST00000631079 1402 ntBASIC20.36■□□□□ 0.85
RCL1Q9Y2P8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCL1Q9Y2P8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCL1Q9Y2P8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.36■□□□□ 0.85
RCL1Q9Y2P8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RCL1Q9Y2P8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RCL1Q9Y2P8 AC093323.1-202ENST00000635031 2045 ntBASIC20.36■□□□□ 0.85
RCL1Q9Y2P8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RCL1Q9Y2P8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RCL1Q9Y2P8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCL1Q9Y2P8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RCL1Q9Y2P8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RCL1Q9Y2P8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCL1Q9Y2P8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCL1Q9Y2P8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.33■□□□□ 0.85
RCL1Q9Y2P8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCL1Q9Y2P8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RCL1Q9Y2P8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
RCL1Q9Y2P8 DUSP8P4-201ENST00000399538 1761 ntBASIC20.33■□□□□ 0.84
RCL1Q9Y2P8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.33■□□□□ 0.84
RCL1Q9Y2P8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCL1Q9Y2P8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RCL1Q9Y2P8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RCL1Q9Y2P8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.32■□□□□ 0.84
RCL1Q9Y2P8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.32■□□□□ 0.84
RCL1Q9Y2P8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RCL1Q9Y2P8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RCL1Q9Y2P8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCL1Q9Y2P8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCL1Q9Y2P8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCL1Q9Y2P8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.31■□□□□ 0.84
RCL1Q9Y2P8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RCL1Q9Y2P8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RCL1Q9Y2P8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCL1Q9Y2P8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCL1Q9Y2P8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCL1Q9Y2P8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.3■□□□□ 0.84
RCL1Q9Y2P8 AC092803.2-201ENST00000564287 1899 ntBASIC20.3■□□□□ 0.84
RCL1Q9Y2P8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.3■□□□□ 0.84
RCL1Q9Y2P8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCL1Q9Y2P8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCL1Q9Y2P8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.29■□□□□ 0.84
RCL1Q9Y2P8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.29■□□□□ 0.84
RCL1Q9Y2P8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RCL1Q9Y2P8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.29■□□□□ 0.84
RCL1Q9Y2P8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCL1Q9Y2P8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCL1Q9Y2P8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RCL1Q9Y2P8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms