Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPIPA1Q9UND3 ABHD17AP5-201ENST00000580133 923 ntBASIC23.17■■□□□ 1.3
NPIPA1Q9UND3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NPIPA1Q9UND3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPIPA1Q9UND3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPIPA1Q9UND3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NPIPA1Q9UND3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
NPIPA1Q9UND3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPIPA1Q9UND3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPIPA1Q9UND3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPIPA1Q9UND3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPIPA1Q9UND3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NPIPA1Q9UND3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NPIPA1Q9UND3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.14■■□□□ 1.29
NPIPA1Q9UND3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.14■■□□□ 1.29
NPIPA1Q9UND3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPIPA1Q9UND3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPIPA1Q9UND3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPIPA1Q9UND3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPIPA1Q9UND3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
NPIPA1Q9UND3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPIPA1Q9UND3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPIPA1Q9UND3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPIPA1Q9UND3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
NPIPA1Q9UND3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPIPA1Q9UND3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPIPA1Q9UND3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
NPIPA1Q9UND3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NPIPA1Q9UND3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPIPA1Q9UND3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.1■■□□□ 1.29
NPIPA1Q9UND3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
NPIPA1Q9UND3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.09■■□□□ 1.29
NPIPA1Q9UND3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.09■■□□□ 1.29
NPIPA1Q9UND3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NPIPA1Q9UND3 AP004833.2-201ENST00000532228 1454 ntBASIC23.09■■□□□ 1.29
NPIPA1Q9UND3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NPIPA1Q9UND3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
NPIPA1Q9UND3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
NPIPA1Q9UND3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
NPIPA1Q9UND3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPIPA1Q9UND3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPIPA1Q9UND3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.29
NPIPA1Q9UND3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
NPIPA1Q9UND3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.07■■□□□ 1.28
NPIPA1Q9UND3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPIPA1Q9UND3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
NPIPA1Q9UND3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.07■■□□□ 1.28
NPIPA1Q9UND3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.06■■□□□ 1.28
NPIPA1Q9UND3 AC148477.6-201ENST00000623746 465 ntBASIC23.06■■□□□ 1.28
NPIPA1Q9UND3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
NPIPA1Q9UND3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.06■■□□□ 1.28
NPIPA1Q9UND3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
NPIPA1Q9UND3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.05■■□□□ 1.28
NPIPA1Q9UND3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
NPIPA1Q9UND3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.05■■□□□ 1.28
NPIPA1Q9UND3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPIPA1Q9UND3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.04■■□□□ 1.28
NPIPA1Q9UND3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NPIPA1Q9UND3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.04■■□□□ 1.28
NPIPA1Q9UND3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NPIPA1Q9UND3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPIPA1Q9UND3 MIR219A2-201ENST00000608502 1504 ntBASIC23.03■■□□□ 1.28
NPIPA1Q9UND3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NPIPA1Q9UND3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.02■■□□□ 1.28
NPIPA1Q9UND3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPIPA1Q9UND3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.02■■□□□ 1.28
NPIPA1Q9UND3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPIPA1Q9UND3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPIPA1Q9UND3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPIPA1Q9UND3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPIPA1Q9UND3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
NPIPA1Q9UND3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
NPIPA1Q9UND3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.01■■□□□ 1.27
NPIPA1Q9UND3 AC142086.6-201ENST00000621154 1765 ntBASIC23.01■■□□□ 1.27
NPIPA1Q9UND3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPIPA1Q9UND3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.01■■□□□ 1.27
NPIPA1Q9UND3 DRD5P2-201ENST00000421395 2012 ntBASIC23■■□□□ 1.27
NPIPA1Q9UND3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23■■□□□ 1.27
NPIPA1Q9UND3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NPIPA1Q9UND3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPIPA1Q9UND3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.99■■□□□ 1.27
NPIPA1Q9UND3 AC060814.1-201ENST00000554326 538 ntBASIC22.99■■□□□ 1.27
NPIPA1Q9UND3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPIPA1Q9UND3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.98■■□□□ 1.27
NPIPA1Q9UND3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPIPA1Q9UND3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.98■■□□□ 1.27
NPIPA1Q9UND3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.98■■□□□ 1.27
NPIPA1Q9UND3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPIPA1Q9UND3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPIPA1Q9UND3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NPIPA1Q9UND3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NPIPA1Q9UND3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
NPIPA1Q9UND3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NPIPA1Q9UND3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPIPA1Q9UND3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPIPA1Q9UND3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.96■■□□□ 1.27
NPIPA1Q9UND3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NPIPA1Q9UND3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.96■■□□□ 1.27
NPIPA1Q9UND3 NTF6A-201ENST00000591175 560 ntBASIC22.96■■□□□ 1.27
NPIPA1Q9UND3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms