Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB4Q9UN71 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGB4Q9UN71 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHGB4Q9UN71 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHGB4Q9UN71 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGB4Q9UN71 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGB4Q9UN71 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PCDHGB4Q9UN71 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGB4Q9UN71 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PCDHGB4Q9UN71 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGB4Q9UN71 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGB4Q9UN71 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PCDHGB4Q9UN71 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB4Q9UN71 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB4Q9UN71 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB4Q9UN71 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGB4Q9UN71 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHGB4Q9UN71 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGB4Q9UN71 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGB4Q9UN71 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.09■■□□□ 1.45
PCDHGB4Q9UN71 MIR3665-201ENST00000578708 105 ntBASIC24.09■■□□□ 1.45
PCDHGB4Q9UN71 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHGB4Q9UN71 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGB4Q9UN71 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHGB4Q9UN71 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.08■■□□□ 1.44
PCDHGB4Q9UN71 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHGB4Q9UN71 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGB4Q9UN71 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGB4Q9UN71 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGB4Q9UN71 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGB4Q9UN71 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGB4Q9UN71 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
PCDHGB4Q9UN71 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGB4Q9UN71 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHGB4Q9UN71 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 DUX4L28-201ENST00000623687 678 ntBASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 LINC01003-201ENST00000564834 1764 ntBASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB4Q9UN71 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHGB4Q9UN71 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGB4Q9UN71 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGB4Q9UN71 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.04■■□□□ 1.44
PCDHGB4Q9UN71 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 AP002414.2-202ENST00000590929 1450 ntBASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHGB4Q9UN71 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGB4Q9UN71 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGB4Q9UN71 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.02■■□□□ 1.44
PCDHGB4Q9UN71 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGB4Q9UN71 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGB4Q9UN71 MIR6090-201ENST00000622481 60 ntBASIC24.02■■□□□ 1.44
PCDHGB4Q9UN71 AC135983.2-203ENST00000454486 1613 ntBASIC24.02■■□□□ 1.44
PCDHGB4Q9UN71 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGB4Q9UN71 AP006261.1-201ENST00000584783 668 ntBASIC24.01■■□□□ 1.43
PCDHGB4Q9UN71 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHGB4Q9UN71 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGB4Q9UN71 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PCDHGB4Q9UN71 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHGB4Q9UN71 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGB4Q9UN71 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGB4Q9UN71 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHGB4Q9UN71 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHGB4Q9UN71 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHGB4Q9UN71 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGB4Q9UN71 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHGB4Q9UN71 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHGB4Q9UN71 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHGB4Q9UN71 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGB4Q9UN71 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGB4Q9UN71 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGB4Q9UN71 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGB4Q9UN71 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
PCDHGB4Q9UN71 LINC00273-201ENST00000539813 1452 ntBASIC23.95■■□□□ 1.42
PCDHGB4Q9UN71 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.95■■□□□ 1.42
PCDHGB4Q9UN71 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGB4Q9UN71 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGB4Q9UN71 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PCDHGB4Q9UN71 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGB4Q9UN71 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGB4Q9UN71 WHAMMP2-203ENST00000563942 1603 ntBASIC23.94■■□□□ 1.42
PCDHGB4Q9UN71 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.93■■□□□ 1.42
PCDHGB4Q9UN71 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB4Q9UN71 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB4Q9UN71 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHGB4Q9UN71 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB4Q9UN71 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PCDHGB4Q9UN71 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGB4Q9UN71 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.92■■□□□ 1.42
PCDHGB4Q9UN71 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms