Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
COL21A1Q96P44 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.64■■□□□ 1.38
COL21A1Q96P44 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
COL21A1Q96P44 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL21A1Q96P44 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.64■■□□□ 1.37
COL21A1Q96P44 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL21A1Q96P44 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL21A1Q96P44 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
COL21A1Q96P44 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.63■■□□□ 1.37
COL21A1Q96P44 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL21A1Q96P44 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL21A1Q96P44 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.62■■□□□ 1.37
COL21A1Q96P44 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL21A1Q96P44 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL21A1Q96P44 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL21A1Q96P44 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.62■■□□□ 1.37
COL21A1Q96P44 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL21A1Q96P44 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.61■■□□□ 1.37
COL21A1Q96P44 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.61■■□□□ 1.37
COL21A1Q96P44 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.61■■□□□ 1.37
COL21A1Q96P44 AP002414.2-202ENST00000590929 1450 ntBASIC23.61■■□□□ 1.37
COL21A1Q96P44 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL21A1Q96P44 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
COL21A1Q96P44 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL21A1Q96P44 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.6■■□□□ 1.37
COL21A1Q96P44 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL21A1Q96P44 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL21A1Q96P44 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.59■■□□□ 1.37
COL21A1Q96P44 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL21A1Q96P44 MIR7108-201ENST00000614319 87 ntBASIC23.59■■□□□ 1.37
COL21A1Q96P44 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.59■■□□□ 1.37
COL21A1Q96P44 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
COL21A1Q96P44 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL21A1Q96P44 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL21A1Q96P44 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.58■■□□□ 1.37
COL21A1Q96P44 DUX4L11-201ENST00000611504 1267 ntBASIC23.58■■□□□ 1.37
COL21A1Q96P44 DUX4L12-201ENST00000614593 1267 ntBASIC23.58■■□□□ 1.37
COL21A1Q96P44 DUX4L14-201ENST00000621227 1267 ntBASIC23.58■■□□□ 1.37
COL21A1Q96P44 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
COL21A1Q96P44 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.57■■□□□ 1.36
COL21A1Q96P44 AC135731.1-201ENST00000569415 2548 ntBASIC23.57■■□□□ 1.36
COL21A1Q96P44 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL21A1Q96P44 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL21A1Q96P44 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL21A1Q96P44 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL21A1Q96P44 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.56■■□□□ 1.36
COL21A1Q96P44 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.55■■□□□ 1.36
COL21A1Q96P44 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL21A1Q96P44 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
COL21A1Q96P44 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL21A1Q96P44 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.55■■□□□ 1.36
COL21A1Q96P44 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL21A1Q96P44 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL21A1Q96P44 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL21A1Q96P44 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
COL21A1Q96P44 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.54■■□□□ 1.36
COL21A1Q96P44 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL21A1Q96P44 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.52■■□□□ 1.36
COL21A1Q96P44 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.52■■□□□ 1.36
COL21A1Q96P44 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL21A1Q96P44 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
COL21A1Q96P44 DUX4L13-201ENST00000554103 1267 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 DUX4L15-201ENST00000611059 1267 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 DUX4L23-201ENST00000615195 1269 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 DUX4L24-201ENST00000617576 1269 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 DUX4L22-201ENST00000618238 1269 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 DUX4L20-201ENST00000619712 1269 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 DUX4L21-201ENST00000622058 1269 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 DUX4L10-201ENST00000622460 1267 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 DUX4L25-201ENST00000624915 1269 ntBASIC23.51■■□□□ 1.35
COL21A1Q96P44 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL21A1Q96P44 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL21A1Q96P44 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL21A1Q96P44 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL21A1Q96P44 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL21A1Q96P44 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL21A1Q96P44 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL21A1Q96P44 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.5■■□□□ 1.35
COL21A1Q96P44 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
COL21A1Q96P44 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL21A1Q96P44 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.49■■□□□ 1.35
COL21A1Q96P44 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL21A1Q96P44 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL21A1Q96P44 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL21A1Q96P44 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.48■■□□□ 1.35
COL21A1Q96P44 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.48■■□□□ 1.35
COL21A1Q96P44 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
COL21A1Q96P44 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.48■■□□□ 1.35
COL21A1Q96P44 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.48■■□□□ 1.35
COL21A1Q96P44 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL21A1Q96P44 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL21A1Q96P44 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL21A1Q96P44 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL21A1Q96P44 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL21A1Q96P44 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL21A1Q96P44 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL21A1Q96P44 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
COL21A1Q96P44 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.45■■□□□ 1.35
COL21A1Q96P44 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL21A1Q96P44 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms