Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
R3HDM4Q96D70 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
R3HDM4Q96D70 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
R3HDM4Q96D70 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HDM4Q96D70 MIR6090-201ENST00000622481 60 ntBASIC20.63■□□□□ 0.89
R3HDM4Q96D70 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
R3HDM4Q96D70 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HDM4Q96D70 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3HDM4Q96D70 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HDM4Q96D70 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3HDM4Q96D70 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.61■□□□□ 0.89
R3HDM4Q96D70 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
R3HDM4Q96D70 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.61■□□□□ 0.89
R3HDM4Q96D70 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.61■□□□□ 0.89
R3HDM4Q96D70 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3HDM4Q96D70 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
R3HDM4Q96D70 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.6■□□□□ 0.89
R3HDM4Q96D70 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
R3HDM4Q96D70 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.6■□□□□ 0.89
R3HDM4Q96D70 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
R3HDM4Q96D70 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.6■□□□□ 0.89
R3HDM4Q96D70 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HDM4Q96D70 AP002414.2-202ENST00000590929 1450 ntBASIC20.59■□□□□ 0.89
R3HDM4Q96D70 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.59■□□□□ 0.89
R3HDM4Q96D70 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.59■□□□□ 0.89
R3HDM4Q96D70 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HDM4Q96D70 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
R3HDM4Q96D70 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.58■□□□□ 0.89
R3HDM4Q96D70 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3HDM4Q96D70 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.58■□□□□ 0.89
R3HDM4Q96D70 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
R3HDM4Q96D70 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.57■□□□□ 0.88
R3HDM4Q96D70 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
R3HDM4Q96D70 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HDM4Q96D70 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HDM4Q96D70 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
R3HDM4Q96D70 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.55■□□□□ 0.88
R3HDM4Q96D70 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HDM4Q96D70 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.55■□□□□ 0.88
R3HDM4Q96D70 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HDM4Q96D70 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HDM4Q96D70 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
R3HDM4Q96D70 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.54■□□□□ 0.88
R3HDM4Q96D70 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.54■□□□□ 0.88
R3HDM4Q96D70 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HDM4Q96D70 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.53■□□□□ 0.88
R3HDM4Q96D70 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.53■□□□□ 0.88
R3HDM4Q96D70 MIR639-201ENST00000384974 98 ntBASIC20.53■□□□□ 0.88
R3HDM4Q96D70 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HDM4Q96D70 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
R3HDM4Q96D70 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HDM4Q96D70 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HDM4Q96D70 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HDM4Q96D70 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
R3HDM4Q96D70 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HDM4Q96D70 MIR4449-201ENST00000578365 66 ntBASIC20.52■□□□□ 0.88
R3HDM4Q96D70 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
R3HDM4Q96D70 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HDM4Q96D70 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HDM4Q96D70 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
R3HDM4Q96D70 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.51■□□□□ 0.87
R3HDM4Q96D70 AC016575.1-201ENST00000607026 382 ntBASIC20.51■□□□□ 0.87
R3HDM4Q96D70 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.51■□□□□ 0.87
R3HDM4Q96D70 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
R3HDM4Q96D70 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HDM4Q96D70 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
R3HDM4Q96D70 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HDM4Q96D70 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.5■□□□□ 0.87
R3HDM4Q96D70 AC135983.2-203ENST00000454486 1613 ntBASIC20.5■□□□□ 0.87
R3HDM4Q96D70 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HDM4Q96D70 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.5■□□□□ 0.87
R3HDM4Q96D70 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.5■□□□□ 0.87
R3HDM4Q96D70 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
R3HDM4Q96D70 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.5■□□□□ 0.87
R3HDM4Q96D70 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3HDM4Q96D70 MIR3648-2-201ENST00000581792 180 ntBASIC20.49■□□□□ 0.87
R3HDM4Q96D70 MIR3648-1-201ENST00000615959 180 ntBASIC20.49■□□□□ 0.87
R3HDM4Q96D70 LINC01971-201ENST00000617888 1048 ntBASIC20.49■□□□□ 0.87
R3HDM4Q96D70 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.49■□□□□ 0.87
R3HDM4Q96D70 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
R3HDM4Q96D70 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
R3HDM4Q96D70 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.48■□□□□ 0.87
R3HDM4Q96D70 DUX4L11-201ENST00000611504 1267 ntBASIC20.48■□□□□ 0.87
R3HDM4Q96D70 DUX4L12-201ENST00000614593 1267 ntBASIC20.48■□□□□ 0.87
R3HDM4Q96D70 DUX4L14-201ENST00000621227 1267 ntBASIC20.48■□□□□ 0.87
R3HDM4Q96D70 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3HDM4Q96D70 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3HDM4Q96D70 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3HDM4Q96D70 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
R3HDM4Q96D70 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.47■□□□□ 0.87
R3HDM4Q96D70 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.47■□□□□ 0.87
R3HDM4Q96D70 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms