Protein–RNA interactions for Protein: Q5EBL8

PDZD11, PDZ domain-containing protein 11, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11Q5EBL8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDZD11Q5EBL8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
PDZD11Q5EBL8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 CLDN5-201ENST00000403084 2357 ntBASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZD11Q5EBL8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZD11Q5EBL8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
PDZD11Q5EBL8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZD11Q5EBL8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZD11Q5EBL8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZD11Q5EBL8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZD11Q5EBL8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZD11Q5EBL8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZD11Q5EBL8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.25■□□□□ 0.67
PDZD11Q5EBL8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PDZD11Q5EBL8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.24■□□□□ 0.67
PDZD11Q5EBL8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZD11Q5EBL8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZD11Q5EBL8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZD11Q5EBL8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZD11Q5EBL8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDZD11Q5EBL8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZD11Q5EBL8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
PDZD11Q5EBL8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.23■□□□□ 0.67
PDZD11Q5EBL8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZD11Q5EBL8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.22■□□□□ 0.67
PDZD11Q5EBL8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDZD11Q5EBL8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDZD11Q5EBL8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDZD11Q5EBL8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDZD11Q5EBL8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.21■□□□□ 0.67
PDZD11Q5EBL8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDZD11Q5EBL8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDZD11Q5EBL8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.2■□□□□ 0.66
PDZD11Q5EBL8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDZD11Q5EBL8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDZD11Q5EBL8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDZD11Q5EBL8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDZD11Q5EBL8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDZD11Q5EBL8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDZD11Q5EBL8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDZD11Q5EBL8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.18■□□□□ 0.66
PDZD11Q5EBL8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.18■□□□□ 0.66
PDZD11Q5EBL8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDZD11Q5EBL8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDZD11Q5EBL8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDZD11Q5EBL8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.18■□□□□ 0.66
PDZD11Q5EBL8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PDZD11Q5EBL8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PDZD11Q5EBL8 AC145676.1-201ENST00000514988 2004 ntBASIC19.17■□□□□ 0.66
PDZD11Q5EBL8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDZD11Q5EBL8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDZD11Q5EBL8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDZD11Q5EBL8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDZD11Q5EBL8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.16■□□□□ 0.66
PDZD11Q5EBL8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDZD11Q5EBL8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDZD11Q5EBL8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDZD11Q5EBL8 AC012676.1-201ENST00000574705 1949 ntBASIC19.15■□□□□ 0.66
PDZD11Q5EBL8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZD11Q5EBL8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZD11Q5EBL8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZD11Q5EBL8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDZD11Q5EBL8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZD11Q5EBL8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZD11Q5EBL8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.14■□□□□ 0.66
PDZD11Q5EBL8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PDZD11Q5EBL8 LINC00543-201ENST00000567234 1845 ntBASIC19.14■□□□□ 0.65
PDZD11Q5EBL8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZD11Q5EBL8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.14■□□□□ 0.65
PDZD11Q5EBL8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.14■□□□□ 0.65
PDZD11Q5EBL8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PDZD11Q5EBL8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZD11Q5EBL8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDZD11Q5EBL8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZD11Q5EBL8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDZD11Q5EBL8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZD11Q5EBL8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZD11Q5EBL8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDZD11Q5EBL8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZD11Q5EBL8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PDZD11Q5EBL8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZD11Q5EBL8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDZD11Q5EBL8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZD11Q5EBL8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms