Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ANKRD55Q3KP44 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ANKRD55Q3KP44 SETD8P1-201ENST00000623146 1180 ntBASIC20.79■□□□□ 0.92
ANKRD55Q3KP44 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ANKRD55Q3KP44 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ANKRD55Q3KP44 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ANKRD55Q3KP44 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ANKRD55Q3KP44 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.77■□□□□ 0.91
ANKRD55Q3KP44 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ANKRD55Q3KP44 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.76■□□□□ 0.91
ANKRD55Q3KP44 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ANKRD55Q3KP44 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ANKRD55Q3KP44 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ANKRD55Q3KP44 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ANKRD55Q3KP44 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.75■□□□□ 0.91
ANKRD55Q3KP44 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ANKRD55Q3KP44 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ANKRD55Q3KP44 AC093323.1-202ENST00000635031 2045 ntBASIC20.75■□□□□ 0.91
ANKRD55Q3KP44 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.74■□□□□ 0.91
ANKRD55Q3KP44 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ANKRD55Q3KP44 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ANKRD55Q3KP44 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ANKRD55Q3KP44 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ANKRD55Q3KP44 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ANKRD55Q3KP44 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ANKRD55Q3KP44 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
ANKRD55Q3KP44 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.73■□□□□ 0.91
ANKRD55Q3KP44 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ANKRD55Q3KP44 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ANKRD55Q3KP44 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.73■□□□□ 0.91
ANKRD55Q3KP44 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ANKRD55Q3KP44 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ANKRD55Q3KP44 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.72■□□□□ 0.91
ANKRD55Q3KP44 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 AC018358.1-201ENST00000631079 1402 ntBASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ANKRD55Q3KP44 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ANKRD55Q3KP44 DUSP8P4-201ENST00000399538 1761 ntBASIC20.7■□□□□ 0.9
ANKRD55Q3KP44 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ANKRD55Q3KP44 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ANKRD55Q3KP44 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ANKRD55Q3KP44 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
ANKRD55Q3KP44 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 AC097358.2-201ENST00000607541 1159 ntBASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.69■□□□□ 0.9
ANKRD55Q3KP44 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.68■□□□□ 0.9
ANKRD55Q3KP44 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ANKRD55Q3KP44 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.68■□□□□ 0.9
ANKRD55Q3KP44 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ANKRD55Q3KP44 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ANKRD55Q3KP44 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ANKRD55Q3KP44 AC092803.2-201ENST00000564287 1899 ntBASIC20.67■□□□□ 0.9
ANKRD55Q3KP44 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.66■□□□□ 0.9
ANKRD55Q3KP44 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ANKRD55Q3KP44 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ANKRD55Q3KP44 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.65■□□□□ 0.9
ANKRD55Q3KP44 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ANKRD55Q3KP44 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ANKRD55Q3KP44 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ANKRD55Q3KP44 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ANKRD55Q3KP44 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ANKRD55Q3KP44 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.64■□□□□ 0.89
ANKRD55Q3KP44 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.64■□□□□ 0.89
ANKRD55Q3KP44 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ANKRD55Q3KP44 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.64■□□□□ 0.89
ANKRD55Q3KP44 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ANKRD55Q3KP44 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms