Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CLCN4P51793 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.82■■□□□ 1.88
CLCN4P51793 TSPY13P-201ENST00000338964 914 ntBASIC26.81■■□□□ 1.88
CLCN4P51793 AC004987.1-201ENST00000428627 508 ntBASIC26.81■■□□□ 1.88
CLCN4P51793 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.81■■□□□ 1.88
CLCN4P51793 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.81■■□□□ 1.88
CLCN4P51793 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CLCN4P51793 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.8■■□□□ 1.88
CLCN4P51793 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
CLCN4P51793 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLCN4P51793 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.79■■□□□ 1.88
CLCN4P51793 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.79■■□□□ 1.88
CLCN4P51793 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.78■■□□□ 1.88
CLCN4P51793 ATP5G2P3-201ENST00000429083 425 ntBASIC26.78■■□□□ 1.88
CLCN4P51793 AL157400.5-201ENST00000507624 621 ntBASIC26.78■■□□□ 1.88
CLCN4P51793 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN4P51793 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN4P51793 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN4P51793 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN4P51793 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.77■■□□□ 1.88
CLCN4P51793 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CLCN4P51793 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CLCN4P51793 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
CLCN4P51793 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CLCN4P51793 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
CLCN4P51793 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CLCN4P51793 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.75■■□□□ 1.87
CLCN4P51793 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CLCN4P51793 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.75■■□□□ 1.87
CLCN4P51793 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
CLCN4P51793 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.74■■□□□ 1.87
CLCN4P51793 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CLCN4P51793 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CLCN4P51793 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CLCN4P51793 AP004833.2-201ENST00000532228 1454 ntBASIC26.74■■□□□ 1.87
CLCN4P51793 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCN4P51793 ST7-AS1-201ENST00000456775 1889 ntBASIC26.73■■□□□ 1.87
CLCN4P51793 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCN4P51793 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCN4P51793 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.73■■□□□ 1.87
CLCN4P51793 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCN4P51793 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CLCN4P51793 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.72■■□□□ 1.87
CLCN4P51793 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.72■■□□□ 1.87
CLCN4P51793 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CLCN4P51793 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.72■■□□□ 1.87
CLCN4P51793 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.71■■□□□ 1.87
CLCN4P51793 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CLCN4P51793 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
CLCN4P51793 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CLCN4P51793 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.69■■□□□ 1.86
CLCN4P51793 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CLCN4P51793 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.68■■□□□ 1.86
CLCN4P51793 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.68■■□□□ 1.86
CLCN4P51793 AC007029.1-201ENST00000604183 313 ntBASIC26.68■■□□□ 1.86
CLCN4P51793 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CLCN4P51793 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CLCN4P51793 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLCN4P51793 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CLCN4P51793 AC100797.4-201ENST00000631653 1827 ntBASIC26.67■■□□□ 1.86
CLCN4P51793 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CLCN4P51793 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.66■■□□□ 1.86
CLCN4P51793 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CLCN4P51793 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CLCN4P51793 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CLCN4P51793 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.64■■□□□ 1.86
CLCN4P51793 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CLCN4P51793 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.64■■□□□ 1.86
CLCN4P51793 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.64■■□□□ 1.85
CLCN4P51793 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CLCN4P51793 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLCN4P51793 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLCN4P51793 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLCN4P51793 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLCN4P51793 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CLCN4P51793 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CLCN4P51793 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
CLCN4P51793 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLCN4P51793 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLCN4P51793 RARRES2P1-201ENST00000474487 481 ntBASIC26.61■■□□□ 1.85
CLCN4P51793 AC129492.7-201ENST00000622992 756 ntBASIC26.61■■□□□ 1.85
CLCN4P51793 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.61■■□□□ 1.85
CLCN4P51793 AC009831.1-201ENST00000580420 1582 ntBASIC26.6■■□□□ 1.85
CLCN4P51793 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.6■■□□□ 1.85
CLCN4P51793 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLCN4P51793 AL592293.1-201ENST00000502889 1188 ntBASIC26.59■■□□□ 1.85
CLCN4P51793 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.59■■□□□ 1.85
CLCN4P51793 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLCN4P51793 AL359258.2-201ENST00000564063 1566 ntBASIC26.58■■□□□ 1.85
CLCN4P51793 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.58■■□□□ 1.85
CLCN4P51793 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.58■■□□□ 1.85
CLCN4P51793 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLCN4P51793 SMPD5-203ENST00000639008 1464 ntBASIC26.58■■□□□ 1.85
CLCN4P51793 AC133552.2-201ENST00000619106 1032 ntBASIC26.58■■□□□ 1.85
CLCN4P51793 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLCN4P51793 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLCN4P51793 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLCN4P51793 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLCN4P51793 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CLCN4P51793 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms