Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HMGCRP04035 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
HMGCRP04035 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
HMGCRP04035 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
HMGCRP04035 AL592293.1-201ENST00000502889 1188 ntBASIC28.83■■■□□ 2.21
HMGCRP04035 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.83■■■□□ 2.21
HMGCRP04035 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
HMGCRP04035 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
HMGCRP04035 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.82■■■□□ 2.2
HMGCRP04035 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.82■■■□□ 2.2
HMGCRP04035 AC009831.1-201ENST00000580420 1582 ntBASIC28.82■■■□□ 2.2
HMGCRP04035 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
HMGCRP04035 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.81■■■□□ 2.2
HMGCRP04035 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.81■■■□□ 2.2
HMGCRP04035 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HMGCRP04035 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.81■■■□□ 2.2
HMGCRP04035 AL451085.2-201ENST00000605085 799 ntBASIC28.81■■■□□ 2.2
HMGCRP04035 AC133552.2-201ENST00000619106 1032 ntBASIC28.81■■■□□ 2.2
HMGCRP04035 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
HMGCRP04035 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
HMGCRP04035 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HMGCRP04035 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.79■■■□□ 2.2
HMGCRP04035 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HMGCRP04035 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
HMGCRP04035 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
HMGCRP04035 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.78■■■□□ 2.2
HMGCRP04035 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
HMGCRP04035 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
HMGCRP04035 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
HMGCRP04035 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
HMGCRP04035 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.77■■■□□ 2.2
HMGCRP04035 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
HMGCRP04035 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
HMGCRP04035 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
HMGCRP04035 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.75■■■□□ 2.19
HMGCRP04035 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
HMGCRP04035 AL135925.1-201ENST00000605920 1701 ntBASIC28.75■■■□□ 2.19
HMGCRP04035 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
HMGCRP04035 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.73■■■□□ 2.19
HMGCRP04035 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
HMGCRP04035 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.72■■■□□ 2.19
HMGCRP04035 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
HMGCRP04035 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
HMGCRP04035 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
HMGCRP04035 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.71■■■□□ 2.19
HMGCRP04035 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
HMGCRP04035 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
HMGCRP04035 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.71■■■□□ 2.19
HMGCRP04035 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
HMGCRP04035 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
HMGCRP04035 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
HMGCRP04035 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
HMGCRP04035 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
HMGCRP04035 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
HMGCRP04035 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.68■■■□□ 2.18
HMGCRP04035 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.68■■■□□ 2.18
HMGCRP04035 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
HMGCRP04035 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
HMGCRP04035 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
HMGCRP04035 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
HMGCRP04035 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
HMGCRP04035 SMPD5-203ENST00000639008 1464 ntBASIC28.67■■■□□ 2.18
HMGCRP04035 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
HMGCRP04035 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
HMGCRP04035 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
HMGCRP04035 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
HMGCRP04035 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
HMGCRP04035 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
HMGCRP04035 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
HMGCRP04035 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
HMGCRP04035 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.66■■■□□ 2.18
HMGCRP04035 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
HMGCRP04035 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
HMGCRP04035 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
HMGCRP04035 AL592295.1-201ENST00000400984 884 ntBASIC28.65■■■□□ 2.18
HMGCRP04035 AC026202.3-201ENST00000600805 1127 ntBASIC28.65■■■□□ 2.18
HMGCRP04035 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
HMGCRP04035 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.65■■■□□ 2.18
HMGCRP04035 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
HMGCRP04035 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
HMGCRP04035 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
HMGCRP04035 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
HMGCRP04035 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.63■■■□□ 2.17
HMGCRP04035 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.63■■■□□ 2.17
HMGCRP04035 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
HMGCRP04035 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.63■■■□□ 2.17
HMGCRP04035 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
HMGCRP04035 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
HMGCRP04035 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HMGCRP04035 DUX4L9-201ENST00000449051 1259 ntBASIC28.61■■■□□ 2.17
HMGCRP04035 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
HMGCRP04035 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.6■■■□□ 2.17
HMGCRP04035 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HMGCRP04035 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.6■■■□□ 2.17
HMGCRP04035 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HMGCRP04035 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.59■■■□□ 2.17
HMGCRP04035 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
HMGCRP04035 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.58■■■□□ 2.17
HMGCRP04035 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.58■■■□□ 2.17
HMGCRP04035 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms