Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TGFAP01135 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TGFAP01135 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TGFAP01135 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.81■□□□□ 0.92
TGFAP01135 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TGFAP01135 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.81■□□□□ 0.92
TGFAP01135 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.81■□□□□ 0.92
TGFAP01135 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TGFAP01135 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.8■□□□□ 0.92
TGFAP01135 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TGFAP01135 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TGFAP01135 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TGFAP01135 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
TGFAP01135 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.8■□□□□ 0.92
TGFAP01135 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TGFAP01135 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TGFAP01135 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TGFAP01135 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TGFAP01135 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TGFAP01135 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TGFAP01135 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.79■□□□□ 0.92
TGFAP01135 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TGFAP01135 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.79■□□□□ 0.92
TGFAP01135 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TGFAP01135 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.78■□□□□ 0.92
TGFAP01135 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TGFAP01135 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TGFAP01135 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TGFAP01135 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.77■□□□□ 0.92
TGFAP01135 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TGFAP01135 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TGFAP01135 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.76■□□□□ 0.91
TGFAP01135 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.76■□□□□ 0.91
TGFAP01135 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TGFAP01135 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TGFAP01135 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.76■□□□□ 0.91
TGFAP01135 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TGFAP01135 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TGFAP01135 AL157400.5-201ENST00000507624 621 ntBASIC20.75■□□□□ 0.91
TGFAP01135 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TGFAP01135 AP004833.2-201ENST00000532228 1454 ntBASIC20.75■□□□□ 0.91
TGFAP01135 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.74■□□□□ 0.91
TGFAP01135 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TGFAP01135 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TGFAP01135 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.74■□□□□ 0.91
TGFAP01135 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.74■□□□□ 0.91
TGFAP01135 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TGFAP01135 AC007029.1-201ENST00000604183 313 ntBASIC20.74■□□□□ 0.91
TGFAP01135 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TGFAP01135 AC133552.2-201ENST00000619106 1032 ntBASIC20.73■□□□□ 0.91
TGFAP01135 AC100797.4-201ENST00000631653 1827 ntBASIC20.72■□□□□ 0.91
TGFAP01135 RARRES2P1-201ENST00000474487 481 ntBASIC20.72■□□□□ 0.91
TGFAP01135 ST7-AS1-201ENST00000456775 1889 ntBASIC20.72■□□□□ 0.91
TGFAP01135 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.72■□□□□ 0.91
TGFAP01135 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TGFAP01135 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.71■□□□□ 0.91
TGFAP01135 SMPD5-203ENST00000639008 1464 ntBASIC20.71■□□□□ 0.91
TGFAP01135 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TGFAP01135 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.71■□□□□ 0.91
TGFAP01135 AL359258.2-201ENST00000564063 1566 ntBASIC20.71■□□□□ 0.91
TGFAP01135 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.71■□□□□ 0.91
TGFAP01135 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TGFAP01135 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.7■□□□□ 0.9
TGFAP01135 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TGFAP01135 DUX4L18-201ENST00000553347 1267 ntBASIC20.7■□□□□ 0.9
TGFAP01135 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TGFAP01135 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.69■□□□□ 0.9
TGFAP01135 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TGFAP01135 AC129492.7-201ENST00000622992 756 ntBASIC20.69■□□□□ 0.9
TGFAP01135 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TGFAP01135 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TGFAP01135 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TGFAP01135 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TGFAP01135 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TGFAP01135 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TGFAP01135 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TGFAP01135 AL592293.1-201ENST00000502889 1188 ntBASIC20.68■□□□□ 0.9
TGFAP01135 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TGFAP01135 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.68■□□□□ 0.9
TGFAP01135 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.68■□□□□ 0.9
TGFAP01135 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TGFAP01135 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TGFAP01135 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TGFAP01135 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TGFAP01135 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TGFAP01135 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TGFAP01135 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TGFAP01135 AC009831.1-201ENST00000580420 1582 ntBASIC20.67■□□□□ 0.9
TGFAP01135 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.66■□□□□ 0.9
TGFAP01135 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TGFAP01135 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TGFAP01135 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TGFAP01135 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.65■□□□□ 0.9
TGFAP01135 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.65■□□□□ 0.9
TGFAP01135 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.65■□□□□ 0.9
TGFAP01135 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.65■□□□□ 0.9
TGFAP01135 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TGFAP01135 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.64■□□□□ 0.9
TGFAP01135 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TGFAP01135 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms