Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TMEM238LA0A1B0GVL6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM238LA0A1B0GVL6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM238LA0A1B0GVL6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM238LA0A1B0GVL6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM238LA0A1B0GVL6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM238LA0A1B0GVL6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TMEM238LA0A1B0GVL6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM238LA0A1B0GVL6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM238LA0A1B0GVL6 LINC00543-201ENST00000567234 1845 ntBASIC17.56■□□□□ 0.4
TMEM238LA0A1B0GVL6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM238LA0A1B0GVL6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TMEM238LA0A1B0GVL6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM238LA0A1B0GVL6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM238LA0A1B0GVL6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM238LA0A1B0GVL6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM238LA0A1B0GVL6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM238LA0A1B0GVL6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM238LA0A1B0GVL6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM238LA0A1B0GVL6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM238LA0A1B0GVL6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMEM238LA0A1B0GVL6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM238LA0A1B0GVL6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM238LA0A1B0GVL6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM238LA0A1B0GVL6 AC020928.2-201ENST00000588717 2197 ntBASIC17.53■□□□□ 0.4
TMEM238LA0A1B0GVL6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM238LA0A1B0GVL6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TMEM238LA0A1B0GVL6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM238LA0A1B0GVL6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM238LA0A1B0GVL6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TMEM238LA0A1B0GVL6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM238LA0A1B0GVL6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM238LA0A1B0GVL6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TMEM238LA0A1B0GVL6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238LA0A1B0GVL6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM238LA0A1B0GVL6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238LA0A1B0GVL6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TMEM238LA0A1B0GVL6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM238LA0A1B0GVL6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TMEM238LA0A1B0GVL6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM238LA0A1B0GVL6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM238LA0A1B0GVL6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM238LA0A1B0GVL6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM238LA0A1B0GVL6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM238LA0A1B0GVL6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM238LA0A1B0GVL6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM238LA0A1B0GVL6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TMEM238LA0A1B0GVL6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238LA0A1B0GVL6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238LA0A1B0GVL6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TMEM238LA0A1B0GVL6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM238LA0A1B0GVL6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TMEM238LA0A1B0GVL6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TMEM238LA0A1B0GVL6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM238LA0A1B0GVL6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM238LA0A1B0GVL6 AC091060.1-201ENST00000623524 1766 ntBASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM238LA0A1B0GVL6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM238LA0A1B0GVL6 CLDN5-201ENST00000403084 2357 ntBASIC17.44■□□□□ 0.38
TMEM238LA0A1B0GVL6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM238LA0A1B0GVL6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.44■□□□□ 0.38
TMEM238LA0A1B0GVL6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms