Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV25A0A0B4J276 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV25A0A0B4J276 DRD5P2-201ENST00000421395 2012 ntBASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 AC139426.1-201ENST00000568218 2529 ntBASIC18.92■□□□□ 0.62
TRAV25A0A0B4J276 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV25A0A0B4J276 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV25A0A0B4J276 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV25A0A0B4J276 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV25A0A0B4J276 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV25A0A0B4J276 MIR219A2-201ENST00000608502 1504 ntBASIC18.9■□□□□ 0.62
TRAV25A0A0B4J276 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV25A0A0B4J276 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRAV25A0A0B4J276 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAV25A0A0B4J276 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAV25A0A0B4J276 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV25A0A0B4J276 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV25A0A0B4J276 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV25A0A0B4J276 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV25A0A0B4J276 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.89■□□□□ 0.61
TRAV25A0A0B4J276 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV25A0A0B4J276 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV25A0A0B4J276 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.88■□□□□ 0.61
TRAV25A0A0B4J276 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRAV25A0A0B4J276 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV25A0A0B4J276 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV25A0A0B4J276 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV25A0A0B4J276 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRAV25A0A0B4J276 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV25A0A0B4J276 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV25A0A0B4J276 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 AC126177.7-201ENST00000547904 679 ntBASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV25A0A0B4J276 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV25A0A0B4J276 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV25A0A0B4J276 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV25A0A0B4J276 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV25A0A0B4J276 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRAV25A0A0B4J276 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV25A0A0B4J276 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV25A0A0B4J276 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV25A0A0B4J276 AC142086.6-201ENST00000621154 1765 ntBASIC18.84■□□□□ 0.61
TRAV25A0A0B4J276 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV25A0A0B4J276 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV25A0A0B4J276 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV25A0A0B4J276 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV25A0A0B4J276 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV25A0A0B4J276 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAV25A0A0B4J276 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRAV25A0A0B4J276 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV25A0A0B4J276 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV25A0A0B4J276 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV25A0A0B4J276 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV25A0A0B4J276 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV25A0A0B4J276 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAV25A0A0B4J276 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TRAV25A0A0B4J276 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV25A0A0B4J276 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV25A0A0B4J276 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV25A0A0B4J276 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV25A0A0B4J276 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV25A0A0B4J276 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV25A0A0B4J276 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV25A0A0B4J276 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV25A0A0B4J276 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV25A0A0B4J276 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV25A0A0B4J276 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV25A0A0B4J276 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV25A0A0B4J276 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRAV25A0A0B4J276 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV25A0A0B4J276 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV25A0A0B4J276 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms