RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A MON2P48563 1636 aaPredicted RBP29.66■■■□□ 2.34
TRN1tP(UGG)A INO80P53115 1489 aa29.5■■■□□ 2.31
TRN1tP(UGG)A SGS1P35187 1447 aa29.46■■■□□ 2.31
TRN1tP(UGG)A TCB3Q03640 1545 aaKnown RBP29.17■■■□□ 2.26
TRN1tP(UGG)A TY1B-DR4Q07793 1604 aa28.99■■■□□ 2.23
TRN1tP(UGG)A SWR1Q05471 1514 aa28.7■■■□□ 2.19
TRN1tP(UGG)A HSL1P34244 1518 aa28.24■■■□□ 2.11
TRN1tP(UGG)A DNA2P38859 1522 aa28.19■■■□□ 2.1
TRN1tP(UGG)A SPT6P23615 1451 aaKnown RBP28.15■■■□□ 2.1
TRN1tP(UGG)A KOG1P38873 1557 aa27.99■■■□□ 2.07
TRN1tP(UGG)A SPA2P23201 1466 aaKnown RBP27.95■■■□□ 2.07
TRN1tP(UGG)A SSN2P38931 1420 aa27.74■■■□□ 2.03
TRN1tP(UGG)A HIR3P47171 1648 aa27.67■■■□□ 2.02
TRN1tP(UGG)A XRN1P22147 1528 aaKnown RBP27.32■■□□□ 1.96
TRN1tP(UGG)A THO2P53552 1597 aaKnown RBP27.07■■□□□ 1.92
TRN1tP(UGG)A BUD4P47136 1447 aa27■■□□□ 1.91
TRN1tP(UGG)A ECM5Q03214 1411 aa26.99■■□□□ 1.91
TRN1tP(UGG)A REV3P14284 1504 aa26.93■■□□□ 1.9
TRN1tP(UGG)A DRS1P32892 752 aaKnown RBP26.79■■□□□ 1.88
TRN1tP(UGG)A SIN3P22579 1536 aa26.7■■□□□ 1.86
TRN1tP(UGG)A MDS3P53094 1487 aa26.65■■□□□ 1.86
TRN1tP(UGG)A ATG2P53855 1592 aa26.61■■□□□ 1.85
TRN1tP(UGG)A TAF2P23255 1407 aa26.54■■□□□ 1.84
TRN1tP(UGG)A SSK2P53599 1579 aa26.52■■□□□ 1.84
TRN1tP(UGG)A PEP1P32319 1579 aa26.51■■□□□ 1.83
TRN1tP(UGG)A RSE1Q04693 1361 aaKnown RBP26.47■■□□□ 1.83
TRN1tP(UGG)A ESP1Q03018 1630 aa26.36■■□□□ 1.81
TRN1tP(UGG)A SKI3P17883 1432 aaKnown RBP26.29■■□□□ 1.8
TRN1tP(UGG)A MYO2P19524 1574 aaKnown RBP26.14■■□□□ 1.78
TRN1tP(UGG)A YPK9Q12697 1472 aa25.91■■□□□ 1.74
TRN1tP(UGG)A BPT1P14772 1559 aa25.86■■□□□ 1.73
TRN1tP(UGG)A SCC2Q04002 1493 aa25.8■■□□□ 1.72
TRN1tP(UGG)A UFD4P33202 1483 aa25.72■■□□□ 1.71
TRN1tP(UGG)A MTC1P47018 478 aaKnown RBP25.67■■□□□ 1.7
TRN1tP(UGG)A RPO31P04051 1460 aa25.63■■□□□ 1.69
TRN1tP(UGG)A TY2B-LR1P0C2J3 1770 aa25.51■■□□□ 1.67
TRN1tP(UGG)A TY2B-FP0CX63 1770 aa25.51■■□□□ 1.67
TRN1tP(UGG)A TY2B-GR2P0CX64 1770 aa25.51■■□□□ 1.67
TRN1tP(UGG)A TY2B-CP25384 1770 aa25.51■■□□□ 1.67
TRN1tP(UGG)A TY2B-DR2Q03494 1770 aa25.51■■□□□ 1.67
TRN1tP(UGG)A TY1B-DR1Q03855 1755 aa25.51■■□□□ 1.67
TRN1tP(UGG)A TY2B-DR3Q07791 1770 aaKnown RBP25.51■■□□□ 1.67
TRN1tP(UGG)A TY2B-OR1Q12113 1770 aa25.51■■□□□ 1.67
TRN1tP(UGG)A TY2B-DR1Q12472 1770 aa25.51■■□□□ 1.67
TRN1tP(UGG)A TY2B-OR2Q12501 1770 aa25.51■■□□□ 1.67
TRN1tP(UGG)A POL1P13382 1468 aa25.48■■□□□ 1.67
TRN1tP(UGG)A YCF1P39109 1515 aaKnown RBP25.46■■□□□ 1.67
TRN1tP(UGG)A RKR1Q04781 1562 aa25.44■■□□□ 1.66
TRN1tP(UGG)A STU1P38198 1513 aa25.34■■□□□ 1.65
TRN1tP(UGG)A TOP2P06786 1428 aaKnown RBP25.34■■□□□ 1.65
TRN1tP(UGG)A TY1B-DR3Q99231 1755 aa25.26■■□□□ 1.63
TRN1tP(UGG)A TY1B-BRQ12193 1756 aa25.24■■□□□ 1.63
TRN1tP(UGG)A TY1B-GR3Q12316 1755 aa25.24■■□□□ 1.63
TRN1tP(UGG)A TY2B-BQ12491 1770 aa25.24■■□□□ 1.63
TRN1tP(UGG)A TY1B-ORQ92393 1755 aa25.24■■□□□ 1.63
TRN1tP(UGG)A CDC25P04821 1589 aa25.22■■□□□ 1.63
TRN1tP(UGG)A YOR1P53049 1477 aa25.21■■□□□ 1.63
TRN1tP(UGG)A CHD1P32657 1468 aa25.15■■□□□ 1.62
TRN1tP(UGG)A TY1B-HO13535 1793 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-DR5P0C2I2 1755 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-DR6P0C2I3 1755 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-LR2P0C2I5 1755 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-LR3P0C2I6 1755 aaKnown RBP25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-PR1P0C2I9 1755 aaKnown RBP25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-PR2P0C2J0 1756 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-PR3P0C2J1 1755 aaKnown RBP25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-JR1P47098 1755 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-ML2Q03434 1755 aaKnown RBP25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-ER1Q03612 1755 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-ML1Q04711 1755 aaKnown RBP25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-GR2Q12269 1755 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-OLQ12273 1755 aa25.13■■□□□ 1.61
TRN1tP(UGG)A TY1B-PLQ12414 1755 aaKnown RBP25.13■■□□□ 1.61
TRN1tP(UGG)A ESC1Q03661 1658 aaKnown RBP25.09■■□□□ 1.61
TRN1tP(UGG)A SMC4Q12267 1418 aa25.09■■□□□ 1.61
TRN1tP(UGG)A RQC2Q12532 1038 aaKnown RBP25.08■■□□□ 1.61
TRN1tP(UGG)A PAN1P32521 1480 aa24.97■■□□□ 1.59
TRN1tP(UGG)A MMS22Q06164 1454 aa24.96■■□□□ 1.59
TRN1tP(UGG)A DNF1P32660 1571 aa24.9■■□□□ 1.58
TRN1tP(UGG)A YTA7P40340 1379 aa24.88■■□□□ 1.57
TRN1tP(UGG)A RPA190P10964 1664 aaKnown RBP24.82■■□□□ 1.56
TRN1tP(UGG)A MYO4P32492 1471 aa24.82■■□□□ 1.56
TRN1tP(UGG)A SPP41P38904 1435 aa24.81■■□□□ 1.56
TRN1tP(UGG)A TY1B-JR2P47100 1755 aaKnown RBP24.67■■□□□ 1.54
TRN1tP(UGG)A TY1B-ER2Q03619 1755 aa24.67■■□□□ 1.54
TRN1tP(UGG)A TY1B-MR1Q04214 1755 aa24.67■■□□□ 1.54
TRN1tP(UGG)A TY1B-MR2Q04670 1755 aaKnown RBP24.67■■□□□ 1.54
TRN1tP(UGG)A TY1B-LR1Q12088 1755 aaKnown RBP24.67■■□□□ 1.54
TRN1tP(UGG)A TY1B-NL1Q12112 1755 aa24.67■■□□□ 1.54
TRN1tP(UGG)A TY1B-GR1Q12141 1755 aa24.67■■□□□ 1.54
TRN1tP(UGG)A TY1B-BLQ12490 1755 aa24.67■■□□□ 1.54
TRN1tP(UGG)A VTH1P40438 1549 aa24.66■■□□□ 1.54
TRN1tP(UGG)A VTH2P40890 1549 aa24.66■■□□□ 1.54
TRN1tP(UGG)A TRM732Q03496 1420 aa24.65■■□□□ 1.54
TRN1tP(UGG)A TSC11P40061 1430 aa24.61■■□□□ 1.53
TRN1tP(UGG)A NTE1Q04958 1679 aa24.56■■□□□ 1.52
TRN1tP(UGG)A MET5P47169 1442 aa24.55■■□□□ 1.52
TRN1tP(UGG)A SNQ2P32568 1501 aaKnown RBP24.45■■□□□ 1.5
TRN1tP(UGG)A RPO21P04050 1733 aaKnown RBP24.44■■□□□ 1.5
TRN1tP(UGG)A MLP2P40457 1679 aa24.4■■□□□ 1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms