RNA–Protein interactions for RNA: snR44

snR44, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR44, Length 211 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR44snR44 MTC1P47018 478 aaKnown RBP13.31□□□□□ -0.28
snR44snR44 DRS1P32892 752 aaKnown RBP13.21□□□□□ -0.29
snR44snR44 BFR2Q06631 534 aaKnown RBP11.37□□□□□ -0.59
snR44snR44 DIP2Q12220 943 aaPredicted RBP11.29□□□□□ -0.6
snR44snR44 AVT3P36062 692 aa11.12□□□□□ -0.63
snR44snR44 FAP1P53971 965 aa11.04□□□□□ -0.64
snR44snR44 ISW2Q08773 1120 aa10.87□□□□□ -0.67
snR44snR44 PRI1P10363 409 aa10.77□□□□□ -0.69
snR44snR44 RSE1Q04693 1361 aaKnown RBP10.71□□□□□ -0.69
snR44snR44 RPG1P38249 964 aaKnown RBP10.7□□□□□ -0.7
snR44snR44 TFA1P36100 482 aa10.62□□□□□ -0.71
snR44snR44 AAD16Q02895 342 aa10.6□□□□□ -0.71
snR44snR44 PRY3P47033 881 aa10.34□□□□□ -0.75
snR44snR44 RPL17AP05740 184 aaKnown RBP10.3□□□□□ -0.76
snR44snR44 RPL17BP46990 184 aaKnown RBP10.3□□□□□ -0.76
snR44snR44 REB1P21538 810 aa10.2□□□□□ -0.78
snR44snR44 TSR3Q12094 313 aaKnown RBP10.19□□□□□ -0.78
snR44snR44 SPT21P35209 758 aa9.93□□□□□ -0.82
snR44snR44 MRPL32P25348 183 aa9.82□□□□□ -0.84
snR44snR44 HAA1Q12753 694 aaKnown RBP9.79□□□□□ -0.84
snR44snR44 RIM101P33400 625 aa9.77□□□□□ -0.85
snR44snR44 YCK3P39962 524 aa9.77□□□□□ -0.85
snR44snR44 YKR023WP36119 530 aaKnown RBP9.63□□□□□ -0.87
snR44snR44 OXP1P28273 1286 aa9.44□□□□□ -0.9
snR44snR44 CDC27P38042 758 aa9.44□□□□□ -0.9
snR44snR44 TFC8Q12308 588 aa9.44□□□□□ -0.9
snR44snR44 HOP09932 586 aa9.41□□□□□ -0.9
snR44snR44 DCD1P06773 312 aa9.32□□□□□ -0.92
snR44snR44 YIL055CP40523 627 aaKnown RBP9.32□□□□□ -0.92
snR44snR44 PTP3P40048 928 aa9.31□□□□□ -0.92
snR44snR44 SSP1P38871 571 aa9.28□□□□□ -0.92
snR44snR44 YAH1Q12184 172 aaKnown RBP9.26□□□□□ -0.93
snR44snR44 YGL015CP33199 130 aa9.21□□□□□ -0.94
snR44snR44 RSM7P47150 247 aa9.18□□□□□ -0.94
snR44snR44 YLR271WQ06152 274 aa9.16□□□□□ -0.94
snR44snR44 ARP8Q12386 881 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
snR44snR44 BCH2P36122 765 aa9.15□□□□□ -0.94
snR44snR44 UBP10P53874 792 aaPredicted RBP9.14□□□□□ -0.95
snR44snR44 MAP2P38174 421 aaKnown RBP9.06□□□□□ -0.96
snR44snR44 AI2P03876 854 aa9.03□□□□□ -0.96
snR44snR44 SCY1P53009 804 aa9.03□□□□□ -0.96
snR44snR44 BBC1P47068 1157 aa9.01□□□□□ -0.97
snR44snR44 EPS1P40557 701 aa8.99□□□□□ -0.97
snR44snR44 MGA2P40578 1113 aa8.96□□□□□ -0.98
snR44snR44 PSD2P53037 1138 aaKnown RBP8.95□□□□□ -0.98
snR44snR44 BDF1P35817 686 aa8.93□□□□□ -0.98
snR44snR44 SLX5P32828 619 aaKnown RBP8.89□□□□□ -0.99
snR44snR44 RQC2Q12532 1038 aaKnown RBP8.89□□□□□ -0.99
snR44snR44 CST9Q06032 482 aa8.86□□□□□ -0.99
snR44snR44 TIF4632P39936 914 aaKnown RBP8.75□□□□□ -1.01
snR44snR44 MRM1P25270 412 aa8.74□□□□□ -1.01
snR44snR44 TGL3P40308 642 aa8.69□□□□□ -1.02
snR44snR44 DMA1P38823 416 aa8.66□□□□□ -1.02
snR44snR44 RTG3P38165 486 aa8.63□□□□□ -1.03
snR44snR44 NSR1P27476 414 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
snR44snR44 RCR1P38212 213 aa8.57□□□□□ -1.04
snR44snR44 RAM2P29703 316 aa8.54□□□□□ -1.04
snR44snR44 VPS29P38759 282 aa8.54□□□□□ -1.04
snR44snR44 YAP5P40574 245 aa8.5□□□□□ -1.05
snR44snR44 YMR1P47147 688 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
snR44snR44 YOR238WQ08634 303 aa8.46□□□□□ -1.06
snR44snR44 MAK11P20484 414 aaKnown RBP8.45□□□□□ -1.06
snR44snR44 MST1P07236 462 aa8.42□□□□□ -1.06
snR44snR44 DBP1P24784 617 aaKnown RBP8.42□□□□□ -1.06
snR44snR44 STS1P38637 319 aa8.41□□□□□ -1.06
snR44snR44 YFR006WP43590 535 aa8.38□□□□□ -1.07
snR44snR44 PIB1Q06651 286 aa8.35□□□□□ -1.07
snR44snR44 SET1P38827 1080 aaKnown RBP8.33□□□□□ -1.08
snR44snR44 COQ8P27697 501 aa8.32□□□□□ -1.08
snR44snR44 SAS10Q12136 610 aaPredicted RBP8.3□□□□□ -1.08
snR44snR44 NOP53Q12080 455 aaKnown RBP8.29□□□□□ -1.08
snR44snR44 VMA1P17255 1071 aaKnown RBP8.28□□□□□ -1.08
snR44snR44 MIF2P35201 549 aa8.28□□□□□ -1.08
snR44snR44 GTT3P39996 337 aa8.27□□□□□ -1.09
snR44snR44 EDS1P38073 919 aa8.25□□□□□ -1.09
snR44snR44 IFH1P39520 1085 aa8.25□□□□□ -1.09
snR44snR44 YPR148CQ06523 435 aa8.22□□□□□ -1.09
snR44snR44 SAM3Q08986 587 aa8.22□□□□□ -1.09
snR44snR44 PTC3P34221 468 aaKnown RBP8.21□□□□□ -1.1
snR44snR44 UBP9P39967 754 aa8.19□□□□□ -1.1
snR44snR44 YOL036WQ08206 761 aa8.14□□□□□ -1.11
snR44snR44 GRE2Q12068 342 aaKnown RBP8.14□□□□□ -1.11
snR44snR44 MSB4Q12317 492 aa8.14□□□□□ -1.11
snR44snR44 VPS70P47161 811 aa8.13□□□□□ -1.11
snR44snR44 GYP5Q12344 894 aa8.13□□□□□ -1.11
snR44snR44 ABP1P15891 592 aaKnown RBP8.12□□□□□ -1.11
snR44snR44 ATH1P48016 1211 aa8.12□□□□□ -1.11
snR44snR44 WSC3Q12215 556 aa8.12□□□□□ -1.11
snR44snR44 YBL029C-AQ3E756 94 aa8.12□□□□□ -1.11
snR44snR44 GUT1P32190 709 aa8.11□□□□□ -1.11
snR44snR44 CKB1P43639 278 aa8.11□□□□□ -1.11
snR44snR44 VNX1P42839 908 aa8.1□□□□□ -1.11
snR44snR44 SET4P42948 560 aa8.1□□□□□ -1.11
snR44snR44 BUD31P25337 157 aaPredicted RBP8.08□□□□□ -1.12
snR44snR44 EAP1P36041 632 aaKnown RBP8.06□□□□□ -1.12
snR44snR44 TIF11P38912 153 aaKnown RBP8.04□□□□□ -1.12
snR44snR44 HTA1P04911 132 aaKnown RBP8.03□□□□□ -1.12
snR44snR44 HTA2P04912 132 aa8.03□□□□□ -1.12
snR44snR44 DCW1P36091 449 aa8.03□□□□□ -1.12
snR44snR44 SPP1Q03012 353 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms