RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeastyeast

Gene snR19, Length 568 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR19snR19 MTC1P47018 478 aaKnown RBP14.42□□□□□ -0.1
snR19snR19 DRS1P32892 752 aaKnown RBP14.41□□□□□ -0.1
snR19snR19 BFR2Q06631 534 aaKnown RBP12.43□□□□□ -0.42
snR19snR19 DIP2Q12220 943 aaPredicted RBP12.29□□□□□ -0.44
snR19snR19 AVT3P36062 692 aa12.12□□□□□ -0.47
snR19snR19 FAP1P53971 965 aa11.89□□□□□ -0.51
snR19snR19 ISW2Q08773 1120 aa11.74□□□□□ -0.53
snR19snR19 TFA1P36100 482 aa11.66□□□□□ -0.54
snR19snR19 PRI1P10363 409 aa11.62□□□□□ -0.55
snR19snR19 RSE1Q04693 1361 aaKnown RBP11.62□□□□□ -0.55
snR19snR19 RPG1P38249 964 aaKnown RBP11.59□□□□□ -0.55
snR19snR19 AAD16Q02895 342 aa11.43□□□□□ -0.58
snR19snR19 RPL17AP05740 184 aaKnown RBP11.19□□□□□ -0.62
snR19snR19 RPL17BP46990 184 aaKnown RBP11.19□□□□□ -0.62
snR19snR19 PRY3P47033 881 aa11.13□□□□□ -0.63
snR19snR19 REB1P21538 810 aa11.05□□□□□ -0.64
snR19snR19 TSR3Q12094 313 aaKnown RBP11.03□□□□□ -0.64
snR19snR19 SPT21P35209 758 aa10.78□□□□□ -0.68
snR19snR19 RIM101P33400 625 aa10.63□□□□□ -0.71
snR19snR19 MRPL32P25348 183 aa10.6□□□□□ -0.71
snR19snR19 YCK3P39962 524 aa10.55□□□□□ -0.72
snR19snR19 HAA1Q12753 694 aaKnown RBP10.51□□□□□ -0.73
snR19snR19 YKR023WP36119 530 aaKnown RBP10.45□□□□□ -0.74
snR19snR19 OXP1P28273 1286 aa10.29□□□□□ -0.76
snR19snR19 CDC27P38042 758 aa10.24□□□□□ -0.77
snR19snR19 TFC8Q12308 588 aa10.23□□□□□ -0.77
snR19snR19 HOP09932 586 aa10.22□□□□□ -0.77
snR19snR19 PTP3P40048 928 aa10.2□□□□□ -0.78
snR19snR19 DCD1P06773 312 aa10.14□□□□□ -0.79
snR19snR19 YIL055CP40523 627 aaKnown RBP10.14□□□□□ -0.79
snR19snR19 SSP1P38871 571 aa10.11□□□□□ -0.79
snR19snR19 YAH1Q12184 172 aaKnown RBP10.11□□□□□ -0.79
snR19snR19 RSM7P47150 247 aa9.99□□□□□ -0.81
snR19snR19 YLR271WQ06152 274 aa9.99□□□□□ -0.81
snR19snR19 ARP8Q12386 881 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
snR19snR19 BCH2P36122 765 aa9.93□□□□□ -0.82
snR19snR19 YGL015CP33199 130 aa9.91□□□□□ -0.82
snR19snR19 MON2P48563 1636 aaPredicted RBP9.83□□□□□ -0.84
snR19snR19 UBP10P53874 792 aaPredicted RBP9.83□□□□□ -0.84
snR19snR19 AI2P03876 854 aa9.82□□□□□ -0.84
snR19snR19 MAP2P38174 421 aaKnown RBP9.81□□□□□ -0.84
snR19snR19 INO80P53115 1489 aa9.8□□□□□ -0.84
snR19snR19 RQC2Q12532 1038 aaKnown RBP9.79□□□□□ -0.84
snR19snR19 SCY1P53009 804 aa9.78□□□□□ -0.84
snR19snR19 EPS1P40557 701 aa9.76□□□□□ -0.85
snR19snR19 MGA2P40578 1113 aa9.76□□□□□ -0.85
snR19snR19 BBC1P47068 1157 aa9.76□□□□□ -0.85
snR19snR19 PSD2P53037 1138 aaKnown RBP9.73□□□□□ -0.85
snR19snR19 BDF1P35817 686 aa9.69□□□□□ -0.86
snR19snR19 CST9Q06032 482 aa9.68□□□□□ -0.86
snR19snR19 SLX5P32828 619 aaKnown RBP9.6□□□□□ -0.87
snR19snR19 DMA1P38823 416 aa9.56□□□□□ -0.88
snR19snR19 MRM1P25270 412 aa9.51□□□□□ -0.89
snR19snR19 TIF4632P39936 914 aaKnown RBP9.42□□□□□ -0.9
snR19snR19 DNA2P38859 1522 aa9.38□□□□□ -0.91
snR19snR19 RTG3P38165 486 aa9.38□□□□□ -0.91
snR19snR19 RCR1P38212 213 aa9.36□□□□□ -0.91
snR19snR19 TGL3P40308 642 aa9.36□□□□□ -0.91
snR19snR19 RAM2P29703 316 aa9.33□□□□□ -0.92
snR19snR19 VPS29P38759 282 aa9.29□□□□□ -0.92
snR19snR19 NSR1P27476 414 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
snR19snR19 SWR1Q05471 1514 aa9.22□□□□□ -0.93
snR19snR19 YMR1P47147 688 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
snR19snR19 MAK11P20484 414 aaKnown RBP9.19□□□□□ -0.94
snR19snR19 YAP5P40574 245 aa9.19□□□□□ -0.94
snR19snR19 YOR238WQ08634 303 aa9.17□□□□□ -0.94
snR19snR19 DBP1P24784 617 aaKnown RBP9.15□□□□□ -0.94
snR19snR19 STS1P38637 319 aa9.15□□□□□ -0.94
snR19snR19 KOG1P38873 1557 aa9.13□□□□□ -0.95
snR19snR19 YFR006WP43590 535 aa9.13□□□□□ -0.95
snR19snR19 SET1P38827 1080 aaKnown RBP9.11□□□□□ -0.95
snR19snR19 SAS10Q12136 610 aaPredicted RBP9.1□□□□□ -0.95
snR19snR19 MST1P07236 462 aa9.08□□□□□ -0.96
snR19snR19 PIB1Q06651 286 aa9.08□□□□□ -0.96
snR19snR19 COQ8P27697 501 aa9.06□□□□□ -0.96
snR19snR19 MIF2P35201 549 aa9.02□□□□□ -0.97
snR19snR19 EDS1P38073 919 aa9□□□□□ -0.97
snR19snR19 VMA1P17255 1071 aaKnown RBP8.99□□□□□ -0.97
snR19snR19 NOP53Q12080 455 aaKnown RBP8.98□□□□□ -0.97
snR19snR19 IFH1P39520 1085 aa8.97□□□□□ -0.97
snR19snR19 YPR148CQ06523 435 aa8.97□□□□□ -0.97
snR19snR19 TY1B-DR4Q07793 1604 aa8.97□□□□□ -0.97
snR19snR19 GTT3P39996 337 aa8.94□□□□□ -0.98
snR19snR19 PTC3P34221 468 aaKnown RBP8.93□□□□□ -0.98
snR19snR19 VPS70P47161 811 aa8.91□□□□□ -0.98
snR19snR19 SAM3Q08986 587 aa8.9□□□□□ -0.98
snR19snR19 TCB3Q03640 1545 aaKnown RBP8.86□□□□□ -0.99
snR19snR19 CKB1P43639 278 aa8.85□□□□□ -0.99
snR19snR19 GRE2Q12068 342 aaKnown RBP8.83□□□□□ -1
snR19snR19 ATH1P48016 1211 aa8.82□□□□□ -1
snR19snR19 YOL036WQ08206 761 aa8.82□□□□□ -1
snR19snR19 GYP5Q12344 894 aa8.82□□□□□ -1
snR19snR19 GUT1P32190 709 aa8.8□□□□□ -1
snR19snR19 WSC3Q12215 556 aa8.8□□□□□ -1
snR19snR19 UBP9P39967 754 aa8.78□□□□□ -1
snR19snR19 SET4P42948 560 aa8.78□□□□□ -1
snR19snR19 MSB4Q12317 492 aa8.78□□□□□ -1
snR19snR19 YBL029C-AQ3E756 94 aa8.77□□□□□ -1.01
snR19snR19 LEU3P08638 886 aa8.75□□□□□ -1.01
snR19snR19 ABP1P15891 592 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms