RNA–Protein interactions for RNA: YPR142C

YPR142C, Transcript of Dubious open reading frame, yeast

Gene YPR142C, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR142C	YPR142C	MTC1	P47018	478 aa	Known RBP	15.44	■□□□□ 0.06
YPR142C	YPR142C	DRS1	P32892	752 aa	Known RBP	14.81	□□□□□ -0.04
YPR142C	YPR142C	FAP1	P53971	965 aa		13.73	□□□□□ -0.21
YPR142C	YPR142C	PRY3	P47033	881 aa		12.91	□□□□□ -0.34
YPR142C	YPR142C	DIP2	Q12220	943 aa	Predicted RBP	12.82	□□□□□ -0.36
YPR142C	YPR142C	PRI1	P10363	409 aa		12.75	□□□□□ -0.37
YPR142C	YPR142C	ISW2	Q08773	1120 aa		12.63	□□□□□ -0.39
YPR142C	YPR142C	AAD16	Q02895	342 aa		12.58	□□□□□ -0.4
YPR142C	YPR142C	AVT3	P36062	692 aa		12.56	□□□□□ -0.4
YPR142C	YPR142C	BFR2	Q06631	534 aa	Known RBP	12.53	□□□□□ -0.4
YPR142C	YPR142C	RPG1	P38249	964 aa	Known RBP	12.49	□□□□□ -0.41
YPR142C	YPR142C	RSE1	Q04693	1361 aa	Known RBP	12.27	□□□□□ -0.45
YPR142C	YPR142C	YCK3	P39962	524 aa		12.1	□□□□□ -0.47
YPR142C	YPR142C	HAA1	Q12753	694 aa	Known RBP	12.09	□□□□□ -0.47
YPR142C	YPR142C	TSR3	Q12094	313 aa	Known RBP	12.04	□□□□□ -0.48
YPR142C	YPR142C	RPL17A	P05740	184 aa	Known RBP	11.86	□□□□□ -0.51
YPR142C	YPR142C	RPL17B	P46990	184 aa	Known RBP	11.86	□□□□□ -0.51
YPR142C	YPR142C	REB1	P21538	810 aa		11.72	□□□□□ -0.53
YPR142C	YPR142C	MRPL32	P25348	183 aa		11.53	□□□□□ -0.56
YPR142C	YPR142C	SPT21	P35209	758 aa		11.48	□□□□□ -0.57
YPR142C	YPR142C	TFA1	P36100	482 aa		11.41	□□□□□ -0.58
YPR142C	YPR142C	YKR023W	P36119	530 aa	Known RBP	11.21	□□□□□ -0.61
YPR142C	YPR142C	RIM101	P33400	625 aa		11.13	□□□□□ -0.63
YPR142C	YPR142C	CDC27	P38042	758 aa		11.13	□□□□□ -0.63
YPR142C	YPR142C	YGL015C	P33199	130 aa		11.06	□□□□□ -0.64
YPR142C	YPR142C	TFC8	Q12308	588 aa		10.97	□□□□□ -0.65
YPR142C	YPR142C	HO	P09932	586 aa		10.93	□□□□□ -0.66
YPR142C	YPR142C	DCD1	P06773	312 aa		10.88	□□□□□ -0.67
YPR142C	YPR142C	OXP1	P28273	1286 aa		10.78	□□□□□ -0.68
YPR142C	YPR142C	UBP10	P53874	792 aa	Predicted RBP	10.74	□□□□□ -0.69
YPR142C	YPR142C	MAP2	P38174	421 aa	Known RBP	10.7	□□□□□ -0.7
YPR142C	YPR142C	BCH2	P36122	765 aa		10.61	□□□□□ -0.71
YPR142C	YPR142C	SCY1	P53009	804 aa		10.55	□□□□□ -0.72
YPR142C	YPR142C	PTP3	P40048	928 aa		10.5	□□□□□ -0.73
YPR142C	YPR142C	YIL055C	P40523	627 aa	Known RBP	10.49	□□□□□ -0.73
YPR142C	YPR142C	YAH1	Q12184	172 aa	Known RBP	10.45	□□□□□ -0.74
YPR142C	YPR142C	BUD31	P25337	157 aa	Predicted RBP	10.42	□□□□□ -0.74
YPR142C	YPR142C	RSM7	P47150	247 aa		10.41	□□□□□ -0.74
YPR142C	YPR142C	EPS1	P40557	701 aa		10.4	□□□□□ -0.74
YPR142C	YPR142C	SLX5	P32828	619 aa	Known RBP	10.38	□□□□□ -0.75
YPR142C	YPR142C	YLR271W	Q06152	274 aa		10.36	□□□□□ -0.75
YPR142C	YPR142C	BDF1	P35817	686 aa		10.32	□□□□□ -0.76
YPR142C	YPR142C	SSP1	P38871	571 aa		10.31	□□□□□ -0.76
YPR142C	YPR142C	AI2	P03876	854 aa		10.29	□□□□□ -0.76
YPR142C	YPR142C	BBC1	P47068	1157 aa		10.22	□□□□□ -0.77
YPR142C	YPR142C	TIF4632	P39936	914 aa	Known RBP	10.21	□□□□□ -0.77
YPR142C	YPR142C	TGL3	P40308	642 aa		10.2	□□□□□ -0.78
YPR142C	YPR142C	PSD2	P53037	1138 aa	Known RBP	10.19	□□□□□ -0.78
YPR142C	YPR142C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.16	□□□□□ -0.78	not detected
YPR142C	YPR142C	CST9	Q06032	482 aa		10.02	□□□□□ -0.81
YPR142C	YPR142C	MGA2	P40578	1113 aa		10.01	□□□□□ -0.81
YPR142C	YPR142C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	9.98	□□□□□ -0.81	not detected
YPR142C	YPR142C	MRM1	P25270	412 aa		9.94	□□□□□ -0.82
YPR142C	YPR142C	UBP9	P39967	754 aa		9.91	□□□□□ -0.82
YPR142C	YPR142C	MST1	P07236	462 aa		9.88	□□□□□ -0.83
YPR142C	YPR142C	SIS1	P25294	352 aa	Known RBP	9.88	□□□□□ -0.83
YPR142C	YPR142C	YAP5	P40574	245 aa		9.83	□□□□□ -0.84
YPR142C	YPR142C	YOR238W	Q08634	303 aa		9.81	□□□□□ -0.84
YPR142C	YPR142C	RCR1	P38212	213 aa		9.76	□□□□□ -0.85
YPR142C	YPR142C	VPS29	P38759	282 aa		9.75	□□□□□ -0.85
YPR142C	YPR142C	RTG3	P38165	486 aa		9.73	□□□□□ -0.85
YPR142C	YPR142C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	9.67	□□□□□ -0.86	not detected
YPR142C	YPR142C	STS1	P38637	319 aa		9.65	□□□□□ -0.86
YPR142C	YPR142C	PIB1	Q06651	286 aa		9.65	□□□□□ -0.86
YPR142C	YPR142C	DBP1	P24784	617 aa	Known RBP	9.61	□□□□□ -0.87
YPR142C	YPR142C	YBL029C-A	Q3E756	94 aa		9.61	□□□□□ -0.87
YPR142C	YPR142C	YFR006W	P43590	535 aa		9.59	□□□□□ -0.87
YPR142C	YPR142C	RAM2	P29703	316 aa		9.58	□□□□□ -0.88
YPR142C	YPR142C	GTT3	P39996	337 aa		9.55	□□□□□ -0.88
YPR142C	YPR142C	RQC2	Q12532	1038 aa	Known RBP	9.54	□□□□□ -0.88
YPR142C	YPR142C	VNX1	P42839	908 aa		9.53	□□□□□ -0.88
YPR142C	YPR142C	VMA1	P17255	1071 aa	Known RBP	9.51	□□□□□ -0.89
YPR142C	YPR142C	WSC3	Q12215	556 aa		9.51	□□□□□ -0.89
YPR142C	YPR142C	MAK11	P20484	414 aa	Known RBP	9.48	□□□□□ -0.89
YPR142C	YPR142C	SAM3	Q08986	587 aa		9.45	□□□□□ -0.9
YPR142C	YPR142C	YOL036W	Q08206	761 aa		9.43	□□□□□ -0.9
YPR142C	YPR142C	SPP1	Q03012	353 aa		9.41	□□□□□ -0.9
YPR142C	YPR142C	MSB4	Q12317	492 aa		9.41	□□□□□ -0.9
YPR142C	YPR142C	TIF11	P38912	153 aa	Known RBP	9.4	□□□□□ -0.9
YPR142C	YPR142C	EDS1	P38073	919 aa		9.37	□□□□□ -0.91
YPR142C	YPR142C	SET4	P42948	560 aa		9.36	□□□□□ -0.91
YPR142C	YPR142C	COQ8	P27697	501 aa		9.33	□□□□□ -0.92
YPR142C	YPR142C	ULI1	P43604	169 aa		9.31	□□□□□ -0.92
YPR142C	YPR142C	IOC2	Q12072	812 aa		9.31	□□□□□ -0.92
YPR142C	YPR142C	MIF2	P35201	549 aa		9.3	□□□□□ -0.92
YPR142C	YPR142C	EAP1	P36041	632 aa	Known RBP	9.28	□□□□□ -0.92
YPR142C	YPR142C	PTC3	P34221	468 aa	Known RBP	9.27	□□□□□ -0.93
YPR142C	YPR142C	FKH1	P40466	484 aa		9.27	□□□□□ -0.93
YPR142C	YPR142C	GYP5	Q12344	894 aa		9.27	□□□□□ -0.93
YPR142C	YPR142C	TRP5	P00931	707 aa	Known RBP	9.26	□□□□□ -0.93
YPR142C	YPR142C	ABP1	P15891	592 aa	Known RBP	9.25	□□□□□ -0.93
YPR142C	YPR142C	LDB19	Q12502	818 aa		9.24	□□□□□ -0.93
YPR142C	YPR142C	GRE2	Q12068	342 aa	Known RBP	9.22	□□□□□ -0.93
YPR142C	YPR142C	NOP53	Q12080	455 aa	Known RBP	9.21	□□□□□ -0.94
YPR142C	YPR142C	AIR2	Q12476	344 aa	Known RBP	9.2	□□□□□ -0.94
YPR142C	YPR142C	DCW1	P36091	449 aa		9.19	□□□□□ -0.94
YPR142C	YPR142C	HTA1	P04911	132 aa	Known RBP	9.17	□□□□□ -0.94
YPR142C	YPR142C	HTA2	P04912	132 aa		9.17	□□□□□ -0.94
YPR142C	YPR142C	SET1	P38827	1080 aa	Known RBP	9.17	□□□□□ -0.94
YPR142C	YPR142C	GUT1	P32190	709 aa		9.16	□□□□□ -0.94

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms