RNA–Protein interactions for RNA: YPR124W

CTR1, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR1, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR1YPR124W MTC1P47018 478 aaKnown RBP18.31■□□□□ 0.52
CTR1YPR124W DRS1P32892 752 aaKnown RBP18.09■□□□□ 0.49
CTR1YPR124W BFR2Q06631 534 aaKnown RBP15.55■□□□□ 0.08
CTR1YPR124W DIP2Q12220 943 aaPredicted RBP15.48■□□□□ 0.07
CTR1YPR124W AVT3P36062 692 aa15.27■□□□□ 0.04
CTR1YPR124W FAP1P53971 965 aa15.19■□□□□ 0.02
CTR1YPR124W ISW2Q08773 1120 aa14.92□□□□□ -0.02
CTR1YPR124W PRI1P10363 409 aa14.83□□□□□ -0.04
CTR1YPR124W RSE1Q04693 1361 aaKnown RBP14.71□□□□□ -0.06
CTR1YPR124W RPG1P38249 964 aaKnown RBP14.7□□□□□ -0.06
CTR1YPR124W AAD16Q02895 342 aa14.59□□□□□ -0.07
CTR1YPR124W TFA1P36100 482 aa14.52□□□□□ -0.09
CTR1YPR124W PRY3P47033 881 aa14.24□□□□□ -0.13
CTR1YPR124W RPL17AP05740 184 aaKnown RBP14.15□□□□□ -0.14
CTR1YPR124W RPL17BP46990 184 aaKnown RBP14.15□□□□□ -0.14
CTR1YPR124W TSR3Q12094 313 aaKnown RBP14.02□□□□□ -0.17
CTR1YPR124W REB1P21538 810 aa13.98□□□□□ -0.17
CTR1YPR124W SPT21P35209 758 aa13.69□□□□□ -0.22
CTR1YPR124W YCK3P39962 524 aa13.56□□□□□ -0.24
CTR1YPR124W MRPL32P25348 183 aa13.49□□□□□ -0.25
CTR1YPR124W HAA1Q12753 694 aaKnown RBP13.47□□□□□ -0.25
CTR1YPR124W RIM101P33400 625 aa13.42□□□□□ -0.26
CTR1YPR124W YKR023WP36119 530 aaKnown RBP13.25□□□□□ -0.29
CTR1YPR124W CDC27P38042 758 aa13.02□□□□□ -0.33
CTR1YPR124W TFC8Q12308 588 aa12.98□□□□□ -0.33
CTR1YPR124W OXP1P28273 1286 aa12.97□□□□□ -0.33
CTR1YPR124W HOP09932 586 aa12.93□□□□□ -0.34
CTR1YPR124W DCD1P06773 312 aa12.83□□□□□ -0.36
CTR1YPR124W YIL055CP40523 627 aaKnown RBP12.74□□□□□ -0.37
CTR1YPR124W PTP3P40048 928 aa12.72□□□□□ -0.37
CTR1YPR124W SSP1P38871 571 aa12.69□□□□□ -0.38
CTR1YPR124W YAH1Q12184 172 aaKnown RBP12.69□□□□□ -0.38
CTR1YPR124W YGL015CP33199 130 aa12.65□□□□□ -0.38
CTR1YPR124W RSM7P47150 247 aa12.59□□□□□ -0.39
CTR1YPR124W BCH2P36122 765 aa12.57□□□□□ -0.4
CTR1YPR124W UBP10P53874 792 aaPredicted RBP12.57□□□□□ -0.4
CTR1YPR124W YLR271WQ06152 274 aa12.57□□□□□ -0.4
CTR1YPR124W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.51□□□□□ -0.41not detected
CTR1YPR124W MAP2P38174 421 aaKnown RBP12.49□□□□□ -0.41
CTR1YPR124W SCY1P53009 804 aa12.42□□□□□ -0.42
CTR1YPR124W AI2P03876 854 aa12.38□□□□□ -0.43
CTR1YPR124W EPS1P40557 701 aa12.37□□□□□ -0.43
CTR1YPR124W BBC1P47068 1157 aa12.33□□□□□ -0.44
CTR1YPR124W PSD2P53037 1138 aaKnown RBP12.3□□□□□ -0.44
CTR1YPR124W BDF1P35817 686 aa12.27□□□□□ -0.45
CTR1YPR124W MGA2P40578 1113 aa12.27□□□□□ -0.45
CTR1YPR124W SLX5P32828 619 aaKnown RBP12.21□□□□□ -0.45
CTR1YPR124W CST9Q06032 482 aa12.17□□□□□ -0.46
CTR1YPR124W TIF4632P39936 914 aaKnown RBP12□□□□□ -0.49
CTR1YPR124W RQC2Q12532 1038 aaKnown RBP12□□□□□ -0.49
CTR1YPR124W MRM1P25270 412 aa11.99□□□□□ -0.49
CTR1YPR124W TGL3P40308 642 aa11.94□□□□□ -0.5
CTR1YPR124W NSR1P27476 414 aaKnown RBP RIP-Chip data11.81□□□□□ -0.52not detected
CTR1YPR124W RTG3P38165 486 aa11.81□□□□□ -0.52
CTR1YPR124W DMA1P38823 416 aa11.79□□□□□ -0.52
CTR1YPR124W RCR1P38212 213 aa11.78□□□□□ -0.52
CTR1YPR124W RAM2P29703 316 aa11.72□□□□□ -0.53
CTR1YPR124W VPS29P38759 282 aa11.72□□□□□ -0.53
CTR1YPR124W YAP5P40574 245 aa11.67□□□□□ -0.54
CTR1YPR124W YMR1P47147 688 aaKnown RBP RIP-Chip data11.65□□□□□ -0.54not detected
CTR1YPR124W YOR238WQ08634 303 aa11.61□□□□□ -0.55
CTR1YPR124W MST1P07236 462 aa11.59□□□□□ -0.55
CTR1YPR124W MAK11P20484 414 aaKnown RBP11.58□□□□□ -0.56
CTR1YPR124W STS1P38637 319 aa11.57□□□□□ -0.56
CTR1YPR124W DBP1P24784 617 aaKnown RBP11.54□□□□□ -0.56
CTR1YPR124W YFR006WP43590 535 aa11.5□□□□□ -0.57
CTR1YPR124W PIB1Q06651 286 aa11.46□□□□□ -0.57
CTR1YPR124W COQ8P27697 501 aa11.4□□□□□ -0.58
CTR1YPR124W VMA1P17255 1071 aaKnown RBP11.39□□□□□ -0.59
CTR1YPR124W SET1P38827 1080 aaKnown RBP11.39□□□□□ -0.59
CTR1YPR124W GTT3P39996 337 aa11.35□□□□□ -0.59
CTR1YPR124W EDS1P38073 919 aa11.34□□□□□ -0.59
CTR1YPR124W SAS10Q12136 610 aaPredicted RBP11.34□□□□□ -0.59
CTR1YPR124W NOP53Q12080 455 aaKnown RBP11.33□□□□□ -0.6
CTR1YPR124W MIF2P35201 549 aa11.32□□□□□ -0.6
CTR1YPR124W SAM3Q08986 587 aa11.3□□□□□ -0.6
CTR1YPR124W YPR148CQ06523 435 aa11.27□□□□□ -0.61
CTR1YPR124W IFH1P39520 1085 aa11.26□□□□□ -0.61
CTR1YPR124W PTC3P34221 468 aaKnown RBP11.25□□□□□ -0.61
CTR1YPR124W UBP9P39967 754 aa11.24□□□□□ -0.61
CTR1YPR124W YOL036WQ08206 761 aa11.2□□□□□ -0.62
CTR1YPR124W MSB4Q12317 492 aa11.19□□□□□ -0.62
CTR1YPR124W YBL029C-AQ3E756 94 aa11.19□□□□□ -0.62
CTR1YPR124W WSC3Q12215 556 aa11.17□□□□□ -0.62
CTR1YPR124W BUD31P25337 157 aaPredicted RBP11.16□□□□□ -0.62
CTR1YPR124W GRE2Q12068 342 aaKnown RBP11.16□□□□□ -0.62
CTR1YPR124W ABP1P15891 592 aaKnown RBP11.14□□□□□ -0.63
CTR1YPR124W VNX1P42839 908 aa11.14□□□□□ -0.63
CTR1YPR124W GYP5Q12344 894 aa11.14□□□□□ -0.63
CTR1YPR124W SET4P42948 560 aa11.12□□□□□ -0.63
CTR1YPR124W GUT1P32190 709 aa11.11□□□□□ -0.63
CTR1YPR124W VPS70P47161 811 aa11.11□□□□□ -0.63
CTR1YPR124W ATH1P48016 1211 aa11.11□□□□□ -0.63
CTR1YPR124W EAP1P36041 632 aaKnown RBP11.05□□□□□ -0.64
CTR1YPR124W TIF11P38912 153 aaKnown RBP11.05□□□□□ -0.64
CTR1YPR124W CKB1P43639 278 aa11.05□□□□□ -0.64
CTR1YPR124W SPP1Q03012 353 aa11.03□□□□□ -0.64
CTR1YPR124W HTA1P04911 132 aaKnown RBP11.01□□□□□ -0.65
CTR1YPR124W HTA2P04912 132 aa11.01□□□□□ -0.65
CTR1YPR124W DCW1P36091 449 aa11.01□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms