RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	MTC1	P47018	478 aa	Known RBP	9.65	□□□□□ -0.86
DBF20	YPR111W	DRS1	P32892	752 aa	Known RBP	9.58	□□□□□ -0.88
DBF20	YPR111W	BFR2	Q06631	534 aa	Known RBP	8.24	□□□□□ -1.09
DBF20	YPR111W	DIP2	Q12220	943 aa	Predicted RBP	8.21	□□□□□ -1.1
DBF20	YPR111W	FAP1	P53971	965 aa		8.08	□□□□□ -1.12
DBF20	YPR111W	AVT3	P36062	692 aa		8.05	□□□□□ -1.12
DBF20	YPR111W	ISW2	Q08773	1120 aa		7.92	□□□□□ -1.14
DBF20	YPR111W	PRI1	P10363	409 aa		7.83	□□□□□ -1.16
DBF20	YPR111W	RSE1	Q04693	1361 aa	Known RBP	7.79	□□□□□ -1.16
DBF20	YPR111W	RPG1	P38249	964 aa	Known RBP	7.77	□□□□□ -1.17
DBF20	YPR111W	AAD16	Q02895	342 aa		7.73	□□□□□ -1.17
DBF20	YPR111W	TFA1	P36100	482 aa		7.7	□□□□□ -1.18
DBF20	YPR111W	PRY3	P47033	881 aa		7.59	□□□□□ -1.19
DBF20	YPR111W	RPL17A	P05740	184 aa	Known RBP	7.47	□□□□□ -1.21
DBF20	YPR111W	RPL17B	P46990	184 aa	Known RBP	7.47	□□□□□ -1.21
DBF20	YPR111W	REB1	P21538	810 aa		7.42	□□□□□ -1.22
DBF20	YPR111W	TSR3	Q12094	313 aa	Known RBP	7.4	□□□□□ -1.23
DBF20	YPR111W	MRPL32	P25348	183 aa		7.18	□□□□□ -1.26
DBF20	YPR111W	SPT21	P35209	758 aa		7.18	□□□□□ -1.26
DBF20	YPR111W	HAA1	Q12753	694 aa	Known RBP	7.16	□□□□□ -1.26
DBF20	YPR111W	RIM101	P33400	625 aa		7.09	□□□□□ -1.27
DBF20	YPR111W	YCK3	P39962	524 aa		7.07	□□□□□ -1.28
DBF20	YPR111W	YKR023W	P36119	530 aa	Known RBP	6.97	□□□□□ -1.29
DBF20	YPR111W	TFC8	Q12308	588 aa		6.85	□□□□□ -1.31
DBF20	YPR111W	OXP1	P28273	1286 aa		6.83	□□□□□ -1.32
DBF20	YPR111W	CDC27	P38042	758 aa		6.83	□□□□□ -1.32
DBF20	YPR111W	HO	P09932	586 aa		6.82	□□□□□ -1.32
DBF20	YPR111W	YIL055C	P40523	627 aa	Known RBP	6.81	□□□□□ -1.32
DBF20	YPR111W	YGL015C	P33199	130 aa		6.74	□□□□□ -1.33
DBF20	YPR111W	PTP3	P40048	928 aa		6.74	□□□□□ -1.33
DBF20	YPR111W	DCD1	P06773	312 aa		6.73	□□□□□ -1.33
DBF20	YPR111W	SSP1	P38871	571 aa		6.73	□□□□□ -1.33
DBF20	YPR111W	YAH1	Q12184	172 aa	Known RBP	6.71	□□□□□ -1.34
DBF20	YPR111W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.68	□□□□□ -1.34	not detected
DBF20	YPR111W	RSM7	P47150	247 aa		6.68	□□□□□ -1.34
DBF20	YPR111W	UBP10	P53874	792 aa	Predicted RBP	6.65	□□□□□ -1.35
DBF20	YPR111W	BCH2	P36122	765 aa		6.64	□□□□□ -1.35
DBF20	YPR111W	YLR271W	Q06152	274 aa		6.64	□□□□□ -1.35
DBF20	YPR111W	MAP2	P38174	421 aa	Known RBP	6.57	□□□□□ -1.36
DBF20	YPR111W	BBC1	P47068	1157 aa		6.57	□□□□□ -1.36
DBF20	YPR111W	AI2	P03876	854 aa		6.55	□□□□□ -1.36
DBF20	YPR111W	SCY1	P53009	804 aa		6.55	□□□□□ -1.36
DBF20	YPR111W	EPS1	P40557	701 aa		6.52	□□□□□ -1.37
DBF20	YPR111W	MGA2	P40578	1113 aa		6.52	□□□□□ -1.37
DBF20	YPR111W	RQC2	Q12532	1038 aa	Known RBP	6.52	□□□□□ -1.37
DBF20	YPR111W	PSD2	P53037	1138 aa	Known RBP	6.49	□□□□□ -1.37
DBF20	YPR111W	BDF1	P35817	686 aa		6.48	□□□□□ -1.37
DBF20	YPR111W	SLX5	P32828	619 aa	Known RBP	6.47	□□□□□ -1.37
DBF20	YPR111W	TIF4632	P39936	914 aa	Known RBP	6.4	□□□□□ -1.38
DBF20	YPR111W	CST9	Q06032	482 aa		6.4	□□□□□ -1.38
DBF20	YPR111W	TGL3	P40308	642 aa		6.36	□□□□□ -1.39
DBF20	YPR111W	MRM1	P25270	412 aa		6.33	□□□□□ -1.4
DBF20	YPR111W	RTG3	P38165	486 aa		6.28	□□□□□ -1.4
DBF20	YPR111W	DMA1	P38823	416 aa		6.26	□□□□□ -1.41
DBF20	YPR111W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
DBF20	YPR111W	YAP5	P40574	245 aa		6.2	□□□□□ -1.42
DBF20	YPR111W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.19	□□□□□ -1.42	not detected
DBF20	YPR111W	BUD31	P25337	157 aa	Predicted RBP	6.18	□□□□□ -1.42
DBF20	YPR111W	VPS29	P38759	282 aa		6.18	□□□□□ -1.42
DBF20	YPR111W	RAM2	P29703	316 aa		6.17	□□□□□ -1.42
DBF20	YPR111W	RCR1	P38212	213 aa		6.17	□□□□□ -1.42
DBF20	YPR111W	YOR238W	Q08634	303 aa		6.17	□□□□□ -1.42
DBF20	YPR111W	MAK11	P20484	414 aa	Known RBP	6.14	□□□□□ -1.43
DBF20	YPR111W	MST1	P07236	462 aa		6.14	□□□□□ -1.43
DBF20	YPR111W	DBP1	P24784	617 aa	Known RBP	6.12	□□□□□ -1.43
DBF20	YPR111W	STS1	P38637	319 aa		6.08	□□□□□ -1.44
DBF20	YPR111W	YFR006W	P43590	535 aa		6.07	□□□□□ -1.44
DBF20	YPR111W	NOP53	Q12080	455 aa	Known RBP	6.07	□□□□□ -1.44
DBF20	YPR111W	SET1	P38827	1080 aa	Known RBP	6.06	□□□□□ -1.44
DBF20	YPR111W	GTT3	P39996	337 aa		6.04	□□□□□ -1.44
DBF20	YPR111W	PIB1	Q06651	286 aa		6.04	□□□□□ -1.44
DBF20	YPR111W	COQ8	P27697	501 aa		6.04	□□□□□ -1.44
DBF20	YPR111W	IFH1	P39520	1085 aa		6.04	□□□□□ -1.44
DBF20	YPR111W	MIF2	P35201	549 aa		6.03	□□□□□ -1.44
DBF20	YPR111W	VMA1	P17255	1071 aa	Known RBP	6.01	□□□□□ -1.45
DBF20	YPR111W	UBP9	P39967	754 aa		6.01	□□□□□ -1.45
DBF20	YPR111W	SAS10	Q12136	610 aa	Predicted RBP	6.01	□□□□□ -1.45
DBF20	YPR111W	SAM3	Q08986	587 aa		5.98	□□□□□ -1.45
DBF20	YPR111W	EDS1	P38073	919 aa		5.96	□□□□□ -1.46
DBF20	YPR111W	PTC3	P34221	468 aa	Known RBP	5.95	□□□□□ -1.46
DBF20	YPR111W	YPR148C	Q06523	435 aa		5.95	□□□□□ -1.46
DBF20	YPR111W	ABP1	P15891	592 aa	Known RBP	5.94	□□□□□ -1.46
DBF20	YPR111W	GRE2	Q12068	342 aa	Known RBP	5.94	□□□□□ -1.46
DBF20	YPR111W	MSB4	Q12317	492 aa		5.94	□□□□□ -1.46
DBF20	YPR111W	CKB1	P43639	278 aa		5.93	□□□□□ -1.46
DBF20	YPR111W	GYP5	Q12344	894 aa		5.92	□□□□□ -1.46
DBF20	YPR111W	GUT1	P32190	709 aa		5.91	□□□□□ -1.46
DBF20	YPR111W	ATH1	P48016	1211 aa		5.91	□□□□□ -1.46
DBF20	YPR111W	WSC3	Q12215	556 aa		5.91	□□□□□ -1.46
DBF20	YPR111W	VPS70	P47161	811 aa		5.91	□□□□□ -1.46
DBF20	YPR111W	YOL036W	Q08206	761 aa		5.91	□□□□□ -1.46
DBF20	YPR111W	EAP1	P36041	632 aa	Known RBP	5.9	□□□□□ -1.47
DBF20	YPR111W	VNX1	P42839	908 aa		5.89	□□□□□ -1.47
DBF20	YPR111W	YBL029C-A	Q3E756	94 aa		5.89	□□□□□ -1.47
DBF20	YPR111W	SET4	P42948	560 aa		5.88	□□□□□ -1.47
DBF20	YPR111W	SIS1	P25294	352 aa	Known RBP	5.88	□□□□□ -1.47
DBF20	YPR111W	SPP1	Q03012	353 aa		5.87	□□□□□ -1.47
DBF20	YPR111W	TIF11	P38912	153 aa	Known RBP	5.86	□□□□□ -1.47
DBF20	YPR111W	HTA1	P04911	132 aa	Known RBP	5.85	□□□□□ -1.47
DBF20	YPR111W	HTA2	P04912	132 aa		5.85	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms