RNA–Protein interactions for RNA: YPR087W

VPS69, Transcript of Dubious open reading frame, yeastyeast

Gene VPS69, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS69YPR087W DRS1P32892 752 aaKnown RBP10.74□□□□□ -0.69
VPS69YPR087W MTC1P47018 478 aaKnown RBP10.14□□□□□ -0.79
VPS69YPR087W BFR2Q06631 534 aaKnown RBP9.54□□□□□ -0.88
VPS69YPR087W TFA1P36100 482 aa9.26□□□□□ -0.93
VPS69YPR087W DIP2Q12220 943 aaPredicted RBP8.94□□□□□ -0.98
VPS69YPR087W AVT3P36062 692 aa8.9□□□□□ -0.98
VPS69YPR087W RQC2Q12532 1038 aaKnown RBP8.62□□□□□ -1.03
VPS69YPR087W RSE1Q04693 1361 aaKnown RBP8.34□□□□□ -1.07
VPS69YPR087W ISW2Q08773 1120 aa8.22□□□□□ -1.09
VPS69YPR087W RPG1P38249 964 aaKnown RBP8.02□□□□□ -1.13
VPS69YPR087W FAP1P53971 965 aa8□□□□□ -1.13
VPS69YPR087W RPL17AP05740 184 aaKnown RBP7.98□□□□□ -1.13
VPS69YPR087W RPL17BP46990 184 aaKnown RBP7.98□□□□□ -1.13
VPS69YPR087W REB1P21538 810 aa7.9□□□□□ -1.14
VPS69YPR087W PRI1P10363 409 aa7.83□□□□□ -1.16
VPS69YPR087W DMA1P38823 416 aa7.83□□□□□ -1.16
VPS69YPR087W PTP3P40048 928 aa7.8□□□□□ -1.16
VPS69YPR087W RIM101P33400 625 aa7.66□□□□□ -1.18
VPS69YPR087W AAD16Q02895 342 aa7.66□□□□□ -1.18
VPS69YPR087W SPT21P35209 758 aa7.63□□□□□ -1.19
VPS69YPR087W SSP1P38871 571 aa7.61□□□□□ -1.19
VPS69YPR087W TAF7Q05021 590 aa7.59□□□□□ -1.19
VPS69YPR087W SGS1P35187 1447 aa7.57□□□□□ -1.2
VPS69YPR087W PRY3P47033 881 aa7.53□□□□□ -1.2
VPS69YPR087W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
VPS69YPR087W TSR3Q12094 313 aaKnown RBP7.48□□□□□ -1.21
VPS69YPR087W INO80P53115 1489 aa7.48□□□□□ -1.21
VPS69YPR087W YIL055CP40523 627 aaKnown RBP7.46□□□□□ -1.22
VPS69YPR087W YAH1Q12184 172 aaKnown RBP7.46□□□□□ -1.22
VPS69YPR087W TCB3Q03640 1545 aaKnown RBP7.42□□□□□ -1.22
VPS69YPR087W LEO1P38439 464 aa7.41□□□□□ -1.22
VPS69YPR087W MON2P48563 1636 aaPredicted RBP7.41□□□□□ -1.22
VPS69YPR087W OXP1P28273 1286 aa7.4□□□□□ -1.22
VPS69YPR087W TY1B-DR4Q07793 1604 aa7.33□□□□□ -1.24
VPS69YPR087W YLR271WQ06152 274 aa7.32□□□□□ -1.24
VPS69YPR087W MGA2P40578 1113 aa7.29□□□□□ -1.24
VPS69YPR087W RSM7P47150 247 aa7.27□□□□□ -1.25
VPS69YPR087W MRPL32P25348 183 aa7.26□□□□□ -1.25
VPS69YPR087W YKR023WP36119 530 aaKnown RBP7.26□□□□□ -1.25
VPS69YPR087W SWR1Q05471 1514 aa7.22□□□□□ -1.25
VPS69YPR087W LEU3P08638 886 aa7.22□□□□□ -1.25
VPS69YPR087W SAS10Q12136 610 aaPredicted RBP7.21□□□□□ -1.26
VPS69YPR087W SSN2P38931 1420 aa7.17□□□□□ -1.26
VPS69YPR087W SPA2P23201 1466 aaKnown RBP7.17□□□□□ -1.26
VPS69YPR087W HSL1P34244 1518 aa7.17□□□□□ -1.26
VPS69YPR087W HOP09932 586 aa7.16□□□□□ -1.26
VPS69YPR087W SPT6P23615 1451 aaKnown RBP7.16□□□□□ -1.26
VPS69YPR087W TFC8Q12308 588 aa7.15□□□□□ -1.26
VPS69YPR087W CST9Q06032 482 aa7.12□□□□□ -1.27
VPS69YPR087W BBC1P47068 1157 aa7.11□□□□□ -1.27
VPS69YPR087W AI2P03876 854 aa7.1□□□□□ -1.27
VPS69YPR087W DCD1P06773 312 aa7.07□□□□□ -1.28
VPS69YPR087W PSD2P53037 1138 aaKnown RBP7.07□□□□□ -1.28
VPS69YPR087W DNA2P38859 1522 aa7.05□□□□□ -1.28
VPS69YPR087W HIR3P47171 1648 aa7.03□□□□□ -1.28
VPS69YPR087W KOG1P38873 1557 aa7.03□□□□□ -1.28
VPS69YPR087W RPN1P38764 993 aaKnown RBP7.02□□□□□ -1.29
VPS69YPR087W YCK3P39962 524 aa7.02□□□□□ -1.29
VPS69YPR087W HAA1Q12753 694 aaKnown RBP7.02□□□□□ -1.29
VPS69YPR087W CDC27P38042 758 aa6.99□□□□□ -1.29
VPS69YPR087W IFH1P39520 1085 aa6.98□□□□□ -1.29
VPS69YPR087W SPB4P25808 606 aaPredicted RBP6.97□□□□□ -1.29
VPS69YPR087W CKB1P43639 278 aa6.97□□□□□ -1.29
VPS69YPR087W XRN1P22147 1528 aaKnown RBP6.96□□□□□ -1.29
VPS69YPR087W BCH2P36122 765 aa6.96□□□□□ -1.3
VPS69YPR087W SET1P38827 1080 aaKnown RBP6.96□□□□□ -1.3
VPS69YPR087W RAM2P29703 316 aa6.92□□□□□ -1.3
VPS69YPR087W MRM1P25270 412 aa6.91□□□□□ -1.3
VPS69YPR087W EPS1P40557 701 aa6.91□□□□□ -1.3
VPS69YPR087W VPS70P47161 811 aa6.91□□□□□ -1.3
VPS69YPR087W RTG3P38165 486 aa6.88□□□□□ -1.31
VPS69YPR087W YPR148CQ06523 435 aa6.87□□□□□ -1.31
VPS69YPR087W REV3P14284 1504 aa6.86□□□□□ -1.31
VPS69YPR087W DMA2P53924 522 aa6.85□□□□□ -1.31
VPS69YPR087W THO2P53552 1597 aaKnown RBP6.85□□□□□ -1.31
VPS69YPR087W MAK11P20484 414 aaKnown RBP6.84□□□□□ -1.31
VPS69YPR087W BUD4P47136 1447 aa6.84□□□□□ -1.32
VPS69YPR087W BDF1P35817 686 aa6.83□□□□□ -1.32
VPS69YPR087W ECM5Q03214 1411 aa6.82□□□□□ -1.32
VPS69YPR087W SIN3P22579 1536 aa6.81□□□□□ -1.32
VPS69YPR087W RCR1P38212 213 aa6.81□□□□□ -1.32
VPS69YPR087W SCY1P53009 804 aa6.79□□□□□ -1.32
VPS69YPR087W HGH1P48362 394 aaKnown RBP6.78□□□□□ -1.32
VPS69YPR087W SSK2P53599 1579 aa6.78□□□□□ -1.32
VPS69YPR087W PBS2P08018 668 aa6.77□□□□□ -1.33
VPS69YPR087W TAF2P23255 1407 aa6.76□□□□□ -1.33
VPS69YPR087W DSF2P38213 736 aa6.76□□□□□ -1.33
VPS69YPR087W ATG2P53855 1592 aa6.74□□□□□ -1.33
VPS69YPR087W UBP10P53874 792 aaPredicted RBP6.74□□□□□ -1.33
VPS69YPR087W RLF2Q12495 606 aa6.74□□□□□ -1.33
VPS69YPR087W MDS3P53094 1487 aa6.73□□□□□ -1.33
VPS69YPR087W ESP1Q03018 1630 aa6.72□□□□□ -1.33
VPS69YPR087W COQ8P27697 501 aa6.72□□□□□ -1.33
VPS69YPR087W YNR021WP53723 404 aaKnown RBP6.72□□□□□ -1.33
VPS69YPR087W NOP53Q12080 455 aaKnown RBP6.71□□□□□ -1.34
VPS69YPR087W MAM3Q12296 706 aa6.71□□□□□ -1.34
VPS69YPR087W PEP1P32319 1579 aa6.7□□□□□ -1.34
VPS69YPR087W SKI3P17883 1432 aaKnown RBP6.69□□□□□ -1.34
VPS69YPR087W MIF2P35201 549 aa6.69□□□□□ -1.34
VPS69YPR087W MYO2P19524 1574 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms