RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeastyeast

Gene NIP7, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP7YPL211W MTC1P47018 478 aaKnown RBP13□□□□□ -0.33
NIP7YPL211W DRS1P32892 752 aaKnown RBP12.63□□□□□ -0.39
NIP7YPL211W FAP1P53971 965 aa11.27□□□□□ -0.61
NIP7YPL211W DIP2Q12220 943 aaPredicted RBP10.89□□□□□ -0.67
NIP7YPL211W PRI1P10363 409 aa10.7□□□□□ -0.7
NIP7YPL211W BFR2Q06631 534 aaKnown RBP10.7□□□□□ -0.7
NIP7YPL211W ISW2Q08773 1120 aa10.67□□□□□ -0.7
NIP7YPL211W AVT3P36062 692 aa10.59□□□□□ -0.71
NIP7YPL211W AAD16Q02895 342 aa10.59□□□□□ -0.71
NIP7YPL211W RPG1P38249 964 aaKnown RBP10.58□□□□□ -0.72
NIP7YPL211W PRY3P47033 881 aa10.57□□□□□ -0.72
NIP7YPL211W RSE1Q04693 1361 aaKnown RBP10.39□□□□□ -0.75
NIP7YPL211W TSR3Q12094 313 aaKnown RBP10.2□□□□□ -0.78
NIP7YPL211W RPL17AP05740 184 aaKnown RBP10.06□□□□□ -0.8
NIP7YPL211W RPL17BP46990 184 aaKnown RBP10.06□□□□□ -0.8
NIP7YPL211W REB1P21538 810 aa9.97□□□□□ -0.81
NIP7YPL211W YCK3P39962 524 aa9.97□□□□□ -0.81
NIP7YPL211W HAA1Q12753 694 aaKnown RBP9.86□□□□□ -0.83
NIP7YPL211W MRPL32P25348 183 aa9.75□□□□□ -0.85
NIP7YPL211W TFA1P36100 482 aa9.68□□□□□ -0.86
NIP7YPL211W SPT21P35209 758 aa9.62□□□□□ -0.87
NIP7YPL211W YKR023WP36119 530 aaKnown RBP9.43□□□□□ -0.9
NIP7YPL211W RIM101P33400 625 aa9.37□□□□□ -0.91
NIP7YPL211W CDC27P38042 758 aa9.37□□□□□ -0.91
NIP7YPL211W HOP09932 586 aa9.28□□□□□ -0.92
NIP7YPL211W DCD1P06773 312 aa9.26□□□□□ -0.93
NIP7YPL211W TFC8Q12308 588 aa9.23□□□□□ -0.93
NIP7YPL211W YGL015CP33199 130 aa9.2□□□□□ -0.94
NIP7YPL211W OXP1P28273 1286 aa9.1□□□□□ -0.95
NIP7YPL211W MAP2P38174 421 aaKnown RBP9.03□□□□□ -0.96
NIP7YPL211W YIL055CP40523 627 aaKnown RBP8.98□□□□□ -0.97
NIP7YPL211W PTP3P40048 928 aa8.97□□□□□ -0.97
NIP7YPL211W UBP10P53874 792 aaPredicted RBP8.97□□□□□ -0.97
NIP7YPL211W BCH2P36122 765 aa8.96□□□□□ -0.98
NIP7YPL211W YAH1Q12184 172 aaKnown RBP8.96□□□□□ -0.98
NIP7YPL211W SCY1P53009 804 aa8.94□□□□□ -0.98
NIP7YPL211W RSM7P47150 247 aa8.82□□□□□ -1
NIP7YPL211W EPS1P40557 701 aa8.77□□□□□ -1.01
NIP7YPL211W YLR271WQ06152 274 aa8.77□□□□□ -1.01
NIP7YPL211W SLX5P32828 619 aaKnown RBP8.76□□□□□ -1.01
NIP7YPL211W SSP1P38871 571 aa8.76□□□□□ -1.01
NIP7YPL211W AI2P03876 854 aa8.72□□□□□ -1.01
NIP7YPL211W BDF1P35817 686 aa8.72□□□□□ -1.01
NIP7YPL211W BBC1P47068 1157 aa8.68□□□□□ -1.02
NIP7YPL211W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
NIP7YPL211W TIF4632P39936 914 aaKnown RBP8.62□□□□□ -1.03
NIP7YPL211W PSD2P53037 1138 aaKnown RBP8.56□□□□□ -1.04
NIP7YPL211W TGL3P40308 642 aa8.55□□□□□ -1.04
NIP7YPL211W CST9Q06032 482 aa8.51□□□□□ -1.05
NIP7YPL211W MGA2P40578 1113 aa8.48□□□□□ -1.05
NIP7YPL211W MRM1P25270 412 aa8.45□□□□□ -1.06
NIP7YPL211W YAP5P40574 245 aa8.28□□□□□ -1.08
NIP7YPL211W NSR1P27476 414 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
NIP7YPL211W RCR1P38212 213 aa8.27□□□□□ -1.09
NIP7YPL211W YOR238WQ08634 303 aa8.27□□□□□ -1.09
NIP7YPL211W RTG3P38165 486 aa8.26□□□□□ -1.09
NIP7YPL211W PIB1Q06651 286 aa8.24□□□□□ -1.09
NIP7YPL211W BUD31P25337 157 aaPredicted RBP8.23□□□□□ -1.09
NIP7YPL211W MST1P07236 462 aa8.22□□□□□ -1.09
NIP7YPL211W VPS29P38759 282 aa8.22□□□□□ -1.09
NIP7YPL211W UBP9P39967 754 aa8.17□□□□□ -1.1
NIP7YPL211W YFR006WP43590 535 aa8.17□□□□□ -1.1
NIP7YPL211W YMR1P47147 688 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1 RIP-Chip
NIP7YPL211W DBP1P24784 617 aaKnown RBP8.15□□□□□ -1.1
NIP7YPL211W STS1P38637 319 aa8.13□□□□□ -1.11
NIP7YPL211W GTT3P39996 337 aa8.11□□□□□ -1.11
NIP7YPL211W YBL029C-AQ3E756 94 aa8.11□□□□□ -1.11
NIP7YPL211W RAM2P29703 316 aa8.1□□□□□ -1.11
NIP7YPL211W WSC3Q12215 556 aa8.1□□□□□ -1.11
NIP7YPL211W VNX1P42839 908 aa8.01□□□□□ -1.13
NIP7YPL211W VMA1P17255 1071 aaKnown RBP8□□□□□ -1.13
NIP7YPL211W MAK11P20484 414 aaKnown RBP7.99□□□□□ -1.13
NIP7YPL211W SPP1Q03012 353 aa7.96□□□□□ -1.14
NIP7YPL211W MIF2P35201 549 aa7.95□□□□□ -1.14
NIP7YPL211W SET4P42948 560 aa7.94□□□□□ -1.14
NIP7YPL211W YOL036WQ08206 761 aa7.93□□□□□ -1.14
NIP7YPL211W SIS1P25294 352 aaKnown RBP7.92□□□□□ -1.14
NIP7YPL211W COQ8P27697 501 aa7.91□□□□□ -1.14
NIP7YPL211W EDS1P38073 919 aa7.9□□□□□ -1.14
NIP7YPL211W TIF11P38912 153 aaKnown RBP7.9□□□□□ -1.14
NIP7YPL211W SAM3Q08986 587 aa7.9□□□□□ -1.14
NIP7YPL211W MSB4Q12317 492 aa7.87□□□□□ -1.15
NIP7YPL211W ULI1P43604 169 aa7.86□□□□□ -1.15
NIP7YPL211W DMA1P38823 416 aa7.85□□□□□ -1.15
NIP7YPL211W GYP5Q12344 894 aa7.85□□□□□ -1.15
NIP7YPL211W PTC3P34221 468 aaKnown RBP7.84□□□□□ -1.15
NIP7YPL211W TRP5P00931 707 aaKnown RBP7.81□□□□□ -1.16
NIP7YPL211W EAP1P36041 632 aaKnown RBP7.81□□□□□ -1.16
NIP7YPL211W DCW1P36091 449 aa7.81□□□□□ -1.16
NIP7YPL211W SET1P38827 1080 aaKnown RBP7.81□□□□□ -1.16
NIP7YPL211W GRE2Q12068 342 aaKnown RBP7.8□□□□□ -1.16
NIP7YPL211W IOC2Q12072 812 aa7.8□□□□□ -1.16
NIP7YPL211W LDB19Q12502 818 aa7.8□□□□□ -1.16
NIP7YPL211W ATH1P48016 1211 aa7.78□□□□□ -1.16
NIP7YPL211W HTA1P04911 132 aaKnown RBP7.75□□□□□ -1.17
NIP7YPL211W HTA2P04912 132 aa7.75□□□□□ -1.17
NIP7YPL211W ABP1P15891 592 aaKnown RBP7.74□□□□□ -1.17
NIP7YPL211W GUT1P32190 709 aa7.73□□□□□ -1.17
NIP7YPL211W RTG1P32607 177 aa7.71□□□□□ -1.18
NIP7YPL211W FKH1P40466 484 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 791.9 ms