RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W MTC1P47018 478 aaKnown RBP9.71□□□□□ -0.86
SRL1YOR247W DRS1P32892 752 aaKnown RBP9.42□□□□□ -0.9
SRL1YOR247W FAP1P53971 965 aa8.39□□□□□ -1.07
SRL1YOR247W DIP2Q12220 943 aaPredicted RBP8.13□□□□□ -1.11
SRL1YOR247W ISW2Q08773 1120 aa8.03□□□□□ -1.12
SRL1YOR247W BFR2Q06631 534 aaKnown RBP8□□□□□ -1.13
SRL1YOR247W PRI1P10363 409 aa7.99□□□□□ -1.13
SRL1YOR247W AAD16Q02895 342 aa7.92□□□□□ -1.14
SRL1YOR247W AVT3P36062 692 aa7.9□□□□□ -1.14
SRL1YOR247W RPG1P38249 964 aaKnown RBP7.87□□□□□ -1.15
SRL1YOR247W PRY3P47033 881 aa7.83□□□□□ -1.16
SRL1YOR247W RSE1Q04693 1361 aaKnown RBP7.79□□□□□ -1.16
SRL1YOR247W TFA1P36100 482 aa7.75□□□□□ -1.17
SRL1YOR247W TSR3Q12094 313 aaKnown RBP7.54□□□□□ -1.2
SRL1YOR247W RPL17AP05740 184 aaKnown RBP7.49□□□□□ -1.21
SRL1YOR247W RPL17BP46990 184 aaKnown RBP7.49□□□□□ -1.21
SRL1YOR247W REB1P21538 810 aa7.47□□□□□ -1.21
SRL1YOR247W HAA1Q12753 694 aaKnown RBP7.42□□□□□ -1.22
SRL1YOR247W MRPL32P25348 183 aa7.33□□□□□ -1.24
SRL1YOR247W YCK3P39962 524 aa7.28□□□□□ -1.24
SRL1YOR247W SPT21P35209 758 aa7.16□□□□□ -1.26
SRL1YOR247W RQC2Q12532 1038 aaKnown RBP7.08□□□□□ -1.28
SRL1YOR247W RIM101P33400 625 aa7.01□□□□□ -1.29
SRL1YOR247W YKR023WP36119 530 aaKnown RBP6.99□□□□□ -1.29
SRL1YOR247W YGL015CP33199 130 aa6.94□□□□□ -1.3
SRL1YOR247W CDC27P38042 758 aa6.92□□□□□ -1.3
SRL1YOR247W TFC8Q12308 588 aa6.88□□□□□ -1.31
SRL1YOR247W HOP09932 586 aa6.85□□□□□ -1.31
SRL1YOR247W DCD1P06773 312 aa6.78□□□□□ -1.32
SRL1YOR247W UBP10P53874 792 aaPredicted RBP6.78□□□□□ -1.32
SRL1YOR247W YIL055CP40523 627 aaKnown RBP6.75□□□□□ -1.33
SRL1YOR247W OXP1P28273 1286 aa6.74□□□□□ -1.33
SRL1YOR247W PTP3P40048 928 aa6.7□□□□□ -1.34
SRL1YOR247W MAP2P38174 421 aaKnown RBP6.69□□□□□ -1.34
SRL1YOR247W BCH2P36122 765 aa6.65□□□□□ -1.34
SRL1YOR247W SCY1P53009 804 aa6.64□□□□□ -1.35
SRL1YOR247W YAH1Q12184 172 aaKnown RBP6.63□□□□□ -1.35
SRL1YOR247W RSM7P47150 247 aa6.61□□□□□ -1.35
SRL1YOR247W SLX5P32828 619 aaKnown RBP6.57□□□□□ -1.36
SRL1YOR247W SSP1P38871 571 aa6.57□□□□□ -1.36
SRL1YOR247W BBC1P47068 1157 aa6.56□□□□□ -1.36
SRL1YOR247W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
SRL1YOR247W TIF4632P39936 914 aaKnown RBP6.54□□□□□ -1.36
SRL1YOR247W EPS1P40557 701 aa6.53□□□□□ -1.36
SRL1YOR247W AI2P03876 854 aa6.51□□□□□ -1.37
SRL1YOR247W DMA1P38823 416 aa6.51□□□□□ -1.37
SRL1YOR247W YLR271WQ06152 274 aa6.51□□□□□ -1.37
SRL1YOR247W BDF1P35817 686 aa6.49□□□□□ -1.37
SRL1YOR247W TGL3P40308 642 aa6.46□□□□□ -1.38
SRL1YOR247W MGA2P40578 1113 aa6.39□□□□□ -1.39
SRL1YOR247W PSD2P53037 1138 aaKnown RBP6.39□□□□□ -1.39
SRL1YOR247W NSR1P27476 414 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SRL1YOR247W CST9Q06032 482 aa6.29□□□□□ -1.4
SRL1YOR247W MRM1P25270 412 aa6.28□□□□□ -1.4
SRL1YOR247W YAP5P40574 245 aa6.25□□□□□ -1.41
SRL1YOR247W YOR238WQ08634 303 aa6.25□□□□□ -1.41
SRL1YOR247W RTG3P38165 486 aa6.22□□□□□ -1.41
SRL1YOR247W UBP9P39967 754 aa6.22□□□□□ -1.41
SRL1YOR247W MST1P07236 462 aa6.2□□□□□ -1.42
SRL1YOR247W TAF7Q05021 590 aa6.18□□□□□ -1.42
SRL1YOR247W BUD31P25337 157 aaPredicted RBP6.17□□□□□ -1.42
SRL1YOR247W LEO1P38439 464 aa6.16□□□□□ -1.42
SRL1YOR247W YMR1P47147 688 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
SRL1YOR247W GTT3P39996 337 aa6.12□□□□□ -1.43
SRL1YOR247W VPS29P38759 282 aa6.11□□□□□ -1.43
SRL1YOR247W DBP1P24784 617 aaKnown RBP6.09□□□□□ -1.43
SRL1YOR247W RCR1P38212 213 aa6.09□□□□□ -1.43
SRL1YOR247W PIB1Q06651 286 aa6.06□□□□□ -1.44
SRL1YOR247W SAS10Q12136 610 aaPredicted RBP6.06□□□□□ -1.44
SRL1YOR247W STS1P38637 319 aa6.04□□□□□ -1.44
SRL1YOR247W MAK11P20484 414 aaKnown RBP6.03□□□□□ -1.44
SRL1YOR247W YFR006WP43590 535 aa6.03□□□□□ -1.44
SRL1YOR247W RAM2P29703 316 aa6.02□□□□□ -1.45
SRL1YOR247W YBL029C-AQ3E756 94 aa6.02□□□□□ -1.45
SRL1YOR247W WSC3Q12215 556 aa6.01□□□□□ -1.45
SRL1YOR247W LEU3P08638 886 aa6□□□□□ -1.45
SRL1YOR247W VMA1P17255 1071 aaKnown RBP6□□□□□ -1.45
SRL1YOR247W VNX1P42839 908 aa6□□□□□ -1.45
SRL1YOR247W MSB4Q12317 492 aa5.99□□□□□ -1.45
SRL1YOR247W SPP1Q03012 353 aa5.98□□□□□ -1.45
SRL1YOR247W EAP1P36041 632 aaKnown RBP5.96□□□□□ -1.46
SRL1YOR247W SAM3Q08986 587 aa5.96□□□□□ -1.46
SRL1YOR247W TIF11P38912 153 aaKnown RBP5.95□□□□□ -1.46
SRL1YOR247W ABP1P15891 592 aaKnown RBP5.94□□□□□ -1.46
SRL1YOR247W SIS1P25294 352 aaKnown RBP5.94□□□□□ -1.46
SRL1YOR247W MIF2P35201 549 aa5.94□□□□□ -1.46
SRL1YOR247W YOL036WQ08206 761 aa5.94□□□□□ -1.46
SRL1YOR247W NOP53Q12080 455 aaKnown RBP5.93□□□□□ -1.46
SRL1YOR247W COQ8P27697 501 aa5.92□□□□□ -1.46
SRL1YOR247W SET4P42948 560 aa5.92□□□□□ -1.46
SRL1YOR247W GYP5Q12344 894 aa5.91□□□□□ -1.46
SRL1YOR247W ULI1P43604 169 aa5.9□□□□□ -1.46
SRL1YOR247W GRE2Q12068 342 aaKnown RBP5.88□□□□□ -1.47
SRL1YOR247W PTC3P34221 468 aaKnown RBP5.87□□□□□ -1.47
SRL1YOR247W SET1P38827 1080 aaKnown RBP5.87□□□□□ -1.47
SRL1YOR247W HTA1P04911 132 aaKnown RBP5.86□□□□□ -1.47
SRL1YOR247W HTA2P04912 132 aa5.86□□□□□ -1.47
SRL1YOR247W EDS1P38073 919 aa5.86□□□□□ -1.47
SRL1YOR247W RPN1P38764 993 aaKnown RBP5.86□□□□□ -1.47
SRL1YOR247W IFH1P39520 1085 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms