RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W MTC1P47018 478 aaKnown RBP15.02■□□□□ -0
CPR8YNR028W DRS1P32892 752 aaKnown RBP14.82□□□□□ -0.04
CPR8YNR028W FAP1P53971 965 aa12.72□□□□□ -0.37
CPR8YNR028W BFR2Q06631 534 aaKnown RBP12.7□□□□□ -0.38
CPR8YNR028W DIP2Q12220 943 aaPredicted RBP12.7□□□□□ -0.38
CPR8YNR028W AVT3P36062 692 aa12.43□□□□□ -0.42
CPR8YNR028W ISW2Q08773 1120 aa12.3□□□□□ -0.44
CPR8YNR028W PRI1P10363 409 aa12.21□□□□□ -0.45
CPR8YNR028W RPG1P38249 964 aaKnown RBP12.14□□□□□ -0.47
CPR8YNR028W RSE1Q04693 1361 aaKnown RBP12.07□□□□□ -0.48
CPR8YNR028W AAD16Q02895 342 aa12.05□□□□□ -0.48
CPR8YNR028W PRY3P47033 881 aa11.93□□□□□ -0.5
CPR8YNR028W TFA1P36100 482 aa11.72□□□□□ -0.53
CPR8YNR028W RPL17AP05740 184 aaKnown RBP11.64□□□□□ -0.55
CPR8YNR028W RPL17BP46990 184 aaKnown RBP11.64□□□□□ -0.55
CPR8YNR028W TSR3Q12094 313 aaKnown RBP11.6□□□□□ -0.55
CPR8YNR028W REB1P21538 810 aa11.53□□□□□ -0.56
CPR8YNR028W YCK3P39962 524 aa11.25□□□□□ -0.61
CPR8YNR028W HAA1Q12753 694 aaKnown RBP11.21□□□□□ -0.61
CPR8YNR028W MRPL32P25348 183 aa11.16□□□□□ -0.62
CPR8YNR028W SPT21P35209 758 aa11.15□□□□□ -0.62
CPR8YNR028W RIM101P33400 625 aa10.95□□□□□ -0.66
CPR8YNR028W YKR023WP36119 530 aaKnown RBP10.86□□□□□ -0.67
CPR8YNR028W CDC27P38042 758 aa10.71□□□□□ -0.69
CPR8YNR028W HOP09932 586 aa10.66□□□□□ -0.7
CPR8YNR028W TFC8Q12308 588 aa10.65□□□□□ -0.7
CPR8YNR028W OXP1P28273 1286 aa10.6□□□□□ -0.71
CPR8YNR028W DCD1P06773 312 aa10.59□□□□□ -0.71
CPR8YNR028W YIL055CP40523 627 aaKnown RBP10.5□□□□□ -0.73
CPR8YNR028W YGL015CP33199 130 aa10.48□□□□□ -0.73
CPR8YNR028W PTP3P40048 928 aa10.45□□□□□ -0.74
CPR8YNR028W YAH1Q12184 172 aaKnown RBP10.44□□□□□ -0.74
CPR8YNR028W SSP1P38871 571 aa10.36□□□□□ -0.75
CPR8YNR028W BCH2P36122 765 aa10.34□□□□□ -0.75
CPR8YNR028W RSM7P47150 247 aa10.31□□□□□ -0.76
CPR8YNR028W UBP10P53874 792 aaPredicted RBP10.31□□□□□ -0.76
CPR8YNR028W MAP2P38174 421 aaKnown RBP10.29□□□□□ -0.76
CPR8YNR028W YLR271WQ06152 274 aa10.27□□□□□ -0.77
CPR8YNR028W SCY1P53009 804 aa10.24□□□□□ -0.77
CPR8YNR028W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
CPR8YNR028W AI2P03876 854 aa10.15□□□□□ -0.78
CPR8YNR028W EPS1P40557 701 aa10.15□□□□□ -0.78
CPR8YNR028W BBC1P47068 1157 aa10.13□□□□□ -0.79
CPR8YNR028W BDF1P35817 686 aa10.08□□□□□ -0.8
CPR8YNR028W SLX5P32828 619 aaKnown RBP10.07□□□□□ -0.8
CPR8YNR028W MGA2P40578 1113 aa10.02□□□□□ -0.81
CPR8YNR028W PSD2P53037 1138 aaKnown RBP10.02□□□□□ -0.81
CPR8YNR028W CST9Q06032 482 aa9.95□□□□□ -0.82
CPR8YNR028W TIF4632P39936 914 aaKnown RBP9.91□□□□□ -0.82
CPR8YNR028W MRM1P25270 412 aa9.84□□□□□ -0.83
CPR8YNR028W TGL3P40308 642 aa9.83□□□□□ -0.84
CPR8YNR028W RTG3P38165 486 aa9.69□□□□□ -0.86
CPR8YNR028W RQC2Q12532 1038 aaKnown RBP9.67□□□□□ -0.86
CPR8YNR028W RCR1P38212 213 aa9.63□□□□□ -0.87
CPR8YNR028W NSR1P27476 414 aaKnown RBP RIP-Chip data9.61□□□□□ -0.87not detected
CPR8YNR028W YAP5P40574 245 aa9.59□□□□□ -0.87
CPR8YNR028W VPS29P38759 282 aa9.58□□□□□ -0.88
CPR8YNR028W DMA1P38823 416 aa9.57□□□□□ -0.88
CPR8YNR028W RAM2P29703 316 aa9.54□□□□□ -0.88
CPR8YNR028W YMR1P47147 688 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
CPR8YNR028W YOR238WQ08634 303 aa9.54□□□□□ -0.88
CPR8YNR028W MST1P07236 462 aa9.48□□□□□ -0.89
CPR8YNR028W DBP1P24784 617 aaKnown RBP9.48□□□□□ -0.89
CPR8YNR028W PIB1Q06651 286 aa9.47□□□□□ -0.89
CPR8YNR028W STS1P38637 319 aa9.46□□□□□ -0.9
CPR8YNR028W YFR006WP43590 535 aa9.46□□□□□ -0.9
CPR8YNR028W MAK11P20484 414 aaKnown RBP9.43□□□□□ -0.9
CPR8YNR028W BUD31P25337 157 aaPredicted RBP9.42□□□□□ -0.9
CPR8YNR028W GTT3P39996 337 aa9.37□□□□□ -0.91
CPR8YNR028W UBP9P39967 754 aa9.32□□□□□ -0.92
CPR8YNR028W VMA1P17255 1071 aaKnown RBP9.31□□□□□ -0.92
CPR8YNR028W MIF2P35201 549 aa9.31□□□□□ -0.92
CPR8YNR028W COQ8P27697 501 aa9.3□□□□□ -0.92
CPR8YNR028W SET1P38827 1080 aaKnown RBP9.29□□□□□ -0.92
CPR8YNR028W WSC3Q12215 556 aa9.25□□□□□ -0.93
CPR8YNR028W EDS1P38073 919 aa9.24□□□□□ -0.93
CPR8YNR028W YBL029C-AQ3E756 94 aa9.24□□□□□ -0.93
CPR8YNR028W SAM3Q08986 587 aa9.21□□□□□ -0.94
CPR8YNR028W PTC3P34221 468 aaKnown RBP9.19□□□□□ -0.94
CPR8YNR028W NOP53Q12080 455 aaKnown RBP9.19□□□□□ -0.94
CPR8YNR028W VNX1P42839 908 aa9.18□□□□□ -0.94
CPR8YNR028W YOL036WQ08206 761 aa9.18□□□□□ -0.94
CPR8YNR028W SET4P42948 560 aa9.16□□□□□ -0.94
CPR8YNR028W MSB4Q12317 492 aa9.15□□□□□ -0.94
CPR8YNR028W GYP5Q12344 894 aa9.15□□□□□ -0.94
CPR8YNR028W IFH1P39520 1085 aa9.14□□□□□ -0.95
CPR8YNR028W GRE2Q12068 342 aaKnown RBP9.14□□□□□ -0.95
CPR8YNR028W SAS10Q12136 610 aaPredicted RBP9.13□□□□□ -0.95
CPR8YNR028W ATH1P48016 1211 aa9.12□□□□□ -0.95
CPR8YNR028W SPP1Q03012 353 aa9.11□□□□□ -0.95
CPR8YNR028W ABP1P15891 592 aaKnown RBP9.08□□□□□ -0.96
CPR8YNR028W GUT1P32190 709 aa9.08□□□□□ -0.96
CPR8YNR028W TIF11P38912 153 aaKnown RBP9.08□□□□□ -0.96
CPR8YNR028W YPR148CQ06523 435 aa9.08□□□□□ -0.96
CPR8YNR028W EAP1P36041 632 aaKnown RBP9.07□□□□□ -0.96
CPR8YNR028W DCW1P36091 449 aa9.06□□□□□ -0.96
CPR8YNR028W VPS70P47161 811 aa9.06□□□□□ -0.96
CPR8YNR028W ULI1P43604 169 aa9.05□□□□□ -0.96
CPR8YNR028W HTA1P04911 132 aaKnown RBP9.03□□□□□ -0.96
CPR8YNR028W HTA2P04912 132 aa9.03□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms