RNA–Protein interactions for RNA: YNL188W

KAR1, Transcript of Protein involved in karyogamy and spindle pole body duplication, yeastyeast

Gene KAR1, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KAR1YNL188W MTC1P47018 478 aaKnown RBP17.04■□□□□ 0.32
KAR1YNL188W DRS1P32892 752 aaKnown RBP16.59■□□□□ 0.25
KAR1YNL188W FAP1P53971 965 aa15.57■□□□□ 0.08
KAR1YNL188W PRY3P47033 881 aa14.66□□□□□ -0.06
KAR1YNL188W DIP2Q12220 943 aaPredicted RBP14.32□□□□□ -0.12
KAR1YNL188W PRI1P10363 409 aa14.12□□□□□ -0.15
KAR1YNL188W AAD16Q02895 342 aa14.12□□□□□ -0.15
KAR1YNL188W BFR2Q06631 534 aaKnown RBP14.11□□□□□ -0.15
KAR1YNL188W ISW2Q08773 1120 aa14.02□□□□□ -0.17
KAR1YNL188W AVT3P36062 692 aa13.98□□□□□ -0.17
KAR1YNL188W YCK3P39962 524 aa13.96□□□□□ -0.17
KAR1YNL188W RPG1P38249 964 aaKnown RBP13.85□□□□□ -0.19
KAR1YNL188W HAA1Q12753 694 aaKnown RBP13.66□□□□□ -0.22
KAR1YNL188W RSE1Q04693 1361 aaKnown RBP13.65□□□□□ -0.22
KAR1YNL188W TSR3Q12094 313 aaKnown RBP13.32□□□□□ -0.28
KAR1YNL188W RPL17AP05740 184 aaKnown RBP13.15□□□□□ -0.3
KAR1YNL188W RPL17BP46990 184 aaKnown RBP13.15□□□□□ -0.3
KAR1YNL188W REB1P21538 810 aa13.05□□□□□ -0.32
KAR1YNL188W TFA1P36100 482 aa12.93□□□□□ -0.34
KAR1YNL188W MRPL32P25348 183 aa12.83□□□□□ -0.36
KAR1YNL188W SPT21P35209 758 aa12.63□□□□□ -0.39
KAR1YNL188W YGL015CP33199 130 aa12.48□□□□□ -0.41
KAR1YNL188W RIM101P33400 625 aa12.37□□□□□ -0.43
KAR1YNL188W YKR023WP36119 530 aaKnown RBP12.35□□□□□ -0.43
KAR1YNL188W CDC27P38042 758 aa12.24□□□□□ -0.45
KAR1YNL188W TFC8Q12308 588 aa12.11□□□□□ -0.47
KAR1YNL188W HOP09932 586 aa12.1□□□□□ -0.47
KAR1YNL188W DCD1P06773 312 aa12.01□□□□□ -0.49
KAR1YNL188W OXP1P28273 1286 aa11.96□□□□□ -0.49
KAR1YNL188W BUD31P25337 157 aaPredicted RBP11.87□□□□□ -0.51
KAR1YNL188W UBP10P53874 792 aaPredicted RBP11.86□□□□□ -0.51
KAR1YNL188W YIL055CP40523 627 aaKnown RBP11.82□□□□□ -0.52
KAR1YNL188W MAP2P38174 421 aaKnown RBP11.81□□□□□ -0.52
KAR1YNL188W PTP3P40048 928 aa11.76□□□□□ -0.53
KAR1YNL188W BCH2P36122 765 aa11.74□□□□□ -0.53
KAR1YNL188W YAH1Q12184 172 aaKnown RBP11.7□□□□□ -0.54
KAR1YNL188W SCY1P53009 804 aa11.66□□□□□ -0.54
KAR1YNL188W RSM7P47150 247 aa11.62□□□□□ -0.55
KAR1YNL188W SSP1P38871 571 aa11.57□□□□□ -0.56
KAR1YNL188W YLR271WQ06152 274 aa11.54□□□□□ -0.56
KAR1YNL188W SLX5P32828 619 aaKnown RBP11.5□□□□□ -0.57
KAR1YNL188W EPS1P40557 701 aa11.49□□□□□ -0.57
KAR1YNL188W AI2P03876 854 aa11.46□□□□□ -0.57
KAR1YNL188W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.46□□□□□ -0.57not detected
KAR1YNL188W BBC1P47068 1157 aa11.44□□□□□ -0.58
KAR1YNL188W BDF1P35817 686 aa11.42□□□□□ -0.58
KAR1YNL188W TIF4632P39936 914 aaKnown RBP11.38□□□□□ -0.59
KAR1YNL188W TGL3P40308 642 aa11.33□□□□□ -0.6
KAR1YNL188W PSD2P53037 1138 aaKnown RBP11.3□□□□□ -0.6
KAR1YNL188W MGA2P40578 1113 aa11.24□□□□□ -0.61
KAR1YNL188W SIS1P25294 352 aaKnown RBP11.21□□□□□ -0.61
KAR1YNL188W UBP9P39967 754 aa11.17□□□□□ -0.62
KAR1YNL188W CST9Q06032 482 aa11.15□□□□□ -0.62
KAR1YNL188W MRM1P25270 412 aa11.08□□□□□ -0.64
KAR1YNL188W NSR1P27476 414 aaKnown RBP RIP-Chip data10.98□□□□□ -0.65not detected
KAR1YNL188W MST1P07236 462 aa10.91□□□□□ -0.66
KAR1YNL188W YOR238WQ08634 303 aa10.91□□□□□ -0.66
KAR1YNL188W RTG3P38165 486 aa10.9□□□□□ -0.66
KAR1YNL188W YAP5P40574 245 aa10.9□□□□□ -0.66
KAR1YNL188W RCR1P38212 213 aa10.83□□□□□ -0.68
KAR1YNL188W VPS29P38759 282 aa10.82□□□□□ -0.68
KAR1YNL188W YMR1P47147 688 aaKnown RBP RIP-Chip data10.78□□□□□ -0.68not detected
KAR1YNL188W DBP1P24784 617 aaKnown RBP10.7□□□□□ -0.7
KAR1YNL188W PIB1Q06651 286 aa10.7□□□□□ -0.7
KAR1YNL188W RAM2P29703 316 aa10.69□□□□□ -0.7
KAR1YNL188W STS1P38637 319 aa10.68□□□□□ -0.7
KAR1YNL188W YFR006WP43590 535 aa10.66□□□□□ -0.7
KAR1YNL188W GTT3P39996 337 aa10.63□□□□□ -0.71
KAR1YNL188W YBL029C-AQ3E756 94 aa10.63□□□□□ -0.71
KAR1YNL188W MAK11P20484 414 aaKnown RBP10.58□□□□□ -0.71
KAR1YNL188W VNX1P42839 908 aa10.56□□□□□ -0.72
KAR1YNL188W WSC3Q12215 556 aa10.56□□□□□ -0.72
KAR1YNL188W VMA1P17255 1071 aaKnown RBP10.54□□□□□ -0.72
KAR1YNL188W SPP1Q03012 353 aa10.46□□□□□ -0.73
KAR1YNL188W SAM3Q08986 587 aa10.46□□□□□ -0.73
KAR1YNL188W MIF2P35201 549 aa10.45□□□□□ -0.74
KAR1YNL188W DMA1P38823 416 aa10.44□□□□□ -0.74
KAR1YNL188W COQ8P27697 501 aa10.43□□□□□ -0.74
KAR1YNL188W TIF11P38912 153 aaKnown RBP10.42□□□□□ -0.74
KAR1YNL188W MSB4Q12317 492 aa10.42□□□□□ -0.74
KAR1YNL188W RQC2Q12532 1038 aaKnown RBP10.41□□□□□ -0.74
KAR1YNL188W YOL036WQ08206 761 aa10.4□□□□□ -0.74
KAR1YNL188W EDS1P38073 919 aa10.39□□□□□ -0.75
KAR1YNL188W SET4P42948 560 aa10.38□□□□□ -0.75
KAR1YNL188W SET1P38827 1080 aaKnown RBP10.35□□□□□ -0.75
KAR1YNL188W NOP53Q12080 455 aaKnown RBP10.35□□□□□ -0.75
KAR1YNL188W EAP1P36041 632 aaKnown RBP10.34□□□□□ -0.75
KAR1YNL188W ULI1P43604 169 aa10.34□□□□□ -0.75
KAR1YNL188W GYP5Q12344 894 aa10.34□□□□□ -0.75
KAR1YNL188W PTC3P34221 468 aaKnown RBP10.33□□□□□ -0.76
KAR1YNL188W GRE2Q12068 342 aaKnown RBP10.31□□□□□ -0.76
KAR1YNL188W IOC2Q12072 812 aa10.3□□□□□ -0.76
KAR1YNL188W ABP1P15891 592 aaKnown RBP10.29□□□□□ -0.76
KAR1YNL188W AIR2Q12476 344 aaKnown RBP10.28□□□□□ -0.76
KAR1YNL188W TRP5P00931 707 aaKnown RBP10.26□□□□□ -0.77
KAR1YNL188W DCW1P36091 449 aa10.25□□□□□ -0.77
KAR1YNL188W ATH1P48016 1211 aa10.25□□□□□ -0.77
KAR1YNL188W GUT1P32190 709 aa10.24□□□□□ -0.77
KAR1YNL188W FKH1P40466 484 aa10.23□□□□□ -0.77
KAR1YNL188W LDB19Q12502 818 aa10.23□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms