RNA–Protein interactions for RNA: YNL116W

DMA2, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene DMA2, Length 1,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DMA2YNL116W MON2P48563 1636 aaPredicted RBP13.86□□□□□ -0.19
DMA2YNL116W SGS1P35187 1447 aa13.78□□□□□ -0.2
DMA2YNL116W INO80P53115 1489 aa13.74□□□□□ -0.21
DMA2YNL116W SPA2P23201 1466 aaKnown RBP13.73□□□□□ -0.21
DMA2YNL116W SSN2P38931 1420 aa13.51□□□□□ -0.25
DMA2YNL116W TCB3Q03640 1545 aaKnown RBP13.37□□□□□ -0.27
DMA2YNL116W TY1B-DR4Q07793 1604 aa13.3□□□□□ -0.28
DMA2YNL116W SWR1Q05471 1514 aa13.26□□□□□ -0.29
DMA2YNL116W DRS1P32892 752 aaKnown RBP13.18□□□□□ -0.3
DMA2YNL116W DNA2P38859 1522 aa13.12□□□□□ -0.31
DMA2YNL116W KOG1P38873 1557 aa13.03□□□□□ -0.32
DMA2YNL116W SKI3P17883 1432 aaKnown RBP12.99□□□□□ -0.33
DMA2YNL116W HSL1P34244 1518 aa12.86□□□□□ -0.35
DMA2YNL116W SPT6P23615 1451 aaKnown RBP12.82□□□□□ -0.36
DMA2YNL116W HIR3P47171 1648 aa12.58□□□□□ -0.4
DMA2YNL116W CHD1P32657 1468 aa12.54□□□□□ -0.4
DMA2YNL116W NOP2P40991 618 aaKnown RBP12.5□□□□□ -0.41
DMA2YNL116W MMS22Q06164 1454 aa12.48□□□□□ -0.41
DMA2YNL116W THO2P53552 1597 aaKnown RBP12.45□□□□□ -0.42
DMA2YNL116W RSE1Q04693 1361 aaKnown RBP12.44□□□□□ -0.42
DMA2YNL116W ECM5Q03214 1411 aa12.39□□□□□ -0.43
DMA2YNL116W BUD4P47136 1447 aa12.39□□□□□ -0.43
DMA2YNL116W XRN1P22147 1528 aaKnown RBP12.37□□□□□ -0.43
DMA2YNL116W NSR1P27476 414 aaKnown RBP RIP-Chip data12.35□□□□□ -0.43not detected
DMA2YNL116W MDS3P53094 1487 aa12.25□□□□□ -0.45
DMA2YNL116W REV3P14284 1504 aa12.21□□□□□ -0.45
DMA2YNL116W UFD4P33202 1483 aa12.2□□□□□ -0.46
DMA2YNL116W PEP1P32319 1579 aa12.18□□□□□ -0.46
DMA2YNL116W SIN3P22579 1536 aa12.18□□□□□ -0.46
DMA2YNL116W ATG2P53855 1592 aa12.14□□□□□ -0.47
DMA2YNL116W SSK2P53599 1579 aa12.12□□□□□ -0.47
DMA2YNL116W YTA7P40340 1379 aa12.09□□□□□ -0.47
DMA2YNL116W TAF2P23255 1407 aa12.09□□□□□ -0.47
DMA2YNL116W STU1P38198 1513 aa12.08□□□□□ -0.48
DMA2YNL116W IKI3Q06706 1349 aaKnown RBP12.07□□□□□ -0.48
DMA2YNL116W TRM732Q03496 1420 aa12.07□□□□□ -0.48
DMA2YNL116W SAS10Q12136 610 aaPredicted RBP12.05□□□□□ -0.48
DMA2YNL116W MYO2P19524 1574 aaKnown RBP12.03□□□□□ -0.48
DMA2YNL116W SPP41P38904 1435 aa12.03□□□□□ -0.48
DMA2YNL116W BFR2Q06631 534 aaKnown RBP12.03□□□□□ -0.48
DMA2YNL116W POL1P13382 1468 aa12.02□□□□□ -0.48
DMA2YNL116W ENP1P38333 483 aaKnown RBP11.97□□□□□ -0.49
DMA2YNL116W ESP1Q03018 1630 aa11.97□□□□□ -0.49
DMA2YNL116W BPT1P14772 1559 aa11.9□□□□□ -0.5
DMA2YNL116W TAF7Q05021 590 aa11.88□□□□□ -0.51
DMA2YNL116W POL5P39985 1022 aaKnown RBP11.87□□□□□ -0.51
DMA2YNL116W SCC2Q04002 1493 aa11.85□□□□□ -0.51
DMA2YNL116W MTC1P47018 478 aaKnown RBP11.84□□□□□ -0.51
DMA2YNL116W MYO4P32492 1471 aa11.83□□□□□ -0.52
DMA2YNL116W SSM4P40318 1319 aa11.82□□□□□ -0.52
DMA2YNL116W NUP170P38181 1502 aa11.82□□□□□ -0.52
DMA2YNL116W YPK9Q12697 1472 aa11.8□□□□□ -0.52
DMA2YNL116W YOR1P53049 1477 aa11.78□□□□□ -0.52
DMA2YNL116W SMC4Q12267 1418 aa11.76□□□□□ -0.53
DMA2YNL116W SEC3P33332 1336 aaKnown RBP11.75□□□□□ -0.53
DMA2YNL116W STH1P32597 1359 aa11.74□□□□□ -0.53
DMA2YNL116W RKR1Q04781 1562 aa11.73□□□□□ -0.53
DMA2YNL116W YCF1P39109 1515 aaKnown RBP11.72□□□□□ -0.53
DMA2YNL116W SNQ2P32568 1501 aaKnown RBP11.69□□□□□ -0.54
DMA2YNL116W SPT7P35177 1332 aa11.68□□□□□ -0.54
DMA2YNL116W PAN1P32521 1480 aa11.67□□□□□ -0.54
DMA2YNL116W RPO31P04051 1460 aa11.65□□□□□ -0.54
DMA2YNL116W RTT106P40161 455 aa11.64□□□□□ -0.55
DMA2YNL116W GEA1P47102 1408 aaPredicted RBP11.6□□□□□ -0.55
DMA2YNL116W IFH1P39520 1085 aa11.59□□□□□ -0.55
DMA2YNL116W TOP2P06786 1428 aaKnown RBP11.59□□□□□ -0.55
DMA2YNL116W TSC11P40061 1430 aa11.57□□□□□ -0.56
DMA2YNL116W TY2B-LR1P0C2J3 1770 aa11.56□□□□□ -0.56
DMA2YNL116W TY2B-FP0CX63 1770 aa11.56□□□□□ -0.56
DMA2YNL116W TY2B-GR2P0CX64 1770 aa11.56□□□□□ -0.56
DMA2YNL116W TY2B-CP25384 1770 aa11.56□□□□□ -0.56
DMA2YNL116W TY2B-DR2Q03494 1770 aa11.56□□□□□ -0.56
DMA2YNL116W TY1B-DR1Q03855 1755 aa11.56□□□□□ -0.56
DMA2YNL116W TY2B-DR3Q07791 1770 aaKnown RBP11.56□□□□□ -0.56
DMA2YNL116W TY2B-OR1Q12113 1770 aa11.56□□□□□ -0.56
DMA2YNL116W TY2B-DR1Q12472 1770 aa11.56□□□□□ -0.56
DMA2YNL116W TY2B-OR2Q12501 1770 aa11.56□□□□□ -0.56
DMA2YNL116W PRS1P32895 427 aaKnown RBP11.54□□□□□ -0.56
DMA2YNL116W MLP2P40457 1679 aa11.53□□□□□ -0.56
DMA2YNL116W CDC25P04821 1589 aa11.52□□□□□ -0.57
DMA2YNL116W PDR15Q04182 1529 aaKnown RBP11.52□□□□□ -0.57
DMA2YNL116W CAB3P36076 571 aa11.51□□□□□ -0.57
DMA2YNL116W TFA1P36100 482 aa11.5□□□□□ -0.57
DMA2YNL116W TY1B-BRQ12193 1756 aa11.49□□□□□ -0.57
DMA2YNL116W TY1B-GR3Q12316 1755 aa11.49□□□□□ -0.57
DMA2YNL116W TY1B-ORQ92393 1755 aa11.49□□□□□ -0.57
DMA2YNL116W PDR10P51533 1564 aa11.47□□□□□ -0.57
DMA2YNL116W ESC1Q03661 1658 aaKnown RBP11.44□□□□□ -0.58
DMA2YNL116W TY2B-BQ12491 1770 aa11.43□□□□□ -0.58
DMA2YNL116W EBP2P36049 427 aaKnown RBP11.42□□□□□ -0.58
DMA2YNL116W TY1B-DR3Q99231 1755 aa11.41□□□□□ -0.58
DMA2YNL116W TY1B-HO13535 1793 aa11.41□□□□□ -0.58
DMA2YNL116W TY1B-DR5P0C2I2 1755 aa11.41□□□□□ -0.58
DMA2YNL116W TY1B-DR6P0C2I3 1755 aa11.41□□□□□ -0.58
DMA2YNL116W TY1B-LR2P0C2I5 1755 aa11.41□□□□□ -0.58
DMA2YNL116W TY1B-LR3P0C2I6 1755 aaKnown RBP11.41□□□□□ -0.58
DMA2YNL116W TY1B-PR1P0C2I9 1755 aaKnown RBP11.41□□□□□ -0.58
DMA2YNL116W TY1B-PR2P0C2J0 1756 aa11.41□□□□□ -0.58
DMA2YNL116W TY1B-PR3P0C2J1 1755 aaKnown RBP11.41□□□□□ -0.58
DMA2YNL116W TY1B-JR1P47098 1755 aa11.41□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms