RNA–Protein interactions for RNA: YMR255W

GFD1, Transcript of Coiled-coiled protein of unknown function, yeastyeast

Gene GFD1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GFD1YMR255W DRS1P32892 752 aaKnown RBP17.03■□□□□ 0.32
GFD1YMR255W MTC1P47018 478 aaKnown RBP16.89■□□□□ 0.29
GFD1YMR255W FAP1P53971 965 aa16.04■□□□□ 0.16
GFD1YMR255W PRY3P47033 881 aa15.12■□□□□ 0.01
GFD1YMR255W BFR2Q06631 534 aaKnown RBP14.71□□□□□ -0.05
GFD1YMR255W AAD16Q02895 342 aa14.62□□□□□ -0.07
GFD1YMR255W PRI1P10363 409 aa14.6□□□□□ -0.07
GFD1YMR255W DIP2Q12220 943 aaPredicted RBP14.48□□□□□ -0.09
GFD1YMR255W YCK3P39962 524 aa14.31□□□□□ -0.12
GFD1YMR255W AVT3P36062 692 aa14.26□□□□□ -0.13
GFD1YMR255W HAA1Q12753 694 aaKnown RBP14.14□□□□□ -0.15
GFD1YMR255W ISW2Q08773 1120 aa14.01□□□□□ -0.17
GFD1YMR255W RPG1P38249 964 aaKnown RBP13.91□□□□□ -0.18
GFD1YMR255W TFA1P36100 482 aa13.78□□□□□ -0.2
GFD1YMR255W TSR3Q12094 313 aaKnown RBP13.74□□□□□ -0.21
GFD1YMR255W RSE1Q04693 1361 aaKnown RBP13.64□□□□□ -0.23
GFD1YMR255W MRPL32P25348 183 aa13.19□□□□□ -0.3
GFD1YMR255W RPL17AP05740 184 aaKnown RBP13.17□□□□□ -0.3
GFD1YMR255W RPL17BP46990 184 aaKnown RBP13.17□□□□□ -0.3
GFD1YMR255W REB1P21538 810 aa13□□□□□ -0.33
GFD1YMR255W YGL015CP33199 130 aa12.92□□□□□ -0.34
GFD1YMR255W SPT21P35209 758 aa12.64□□□□□ -0.39
GFD1YMR255W RIM101P33400 625 aa12.46□□□□□ -0.41
GFD1YMR255W CDC27P38042 758 aa12.39□□□□□ -0.43
GFD1YMR255W BUD31P25337 157 aaPredicted RBP12.27□□□□□ -0.45
GFD1YMR255W YKR023WP36119 530 aaKnown RBP12.26□□□□□ -0.45
GFD1YMR255W UBP10P53874 792 aaPredicted RBP12.14□□□□□ -0.47
GFD1YMR255W OXP1P28273 1286 aa12.12□□□□□ -0.47
GFD1YMR255W PTP3P40048 928 aa12.12□□□□□ -0.47
GFD1YMR255W MAP2P38174 421 aaKnown RBP12.11□□□□□ -0.47
GFD1YMR255W HOP09932 586 aa12.06□□□□□ -0.48
GFD1YMR255W DCD1P06773 312 aa12□□□□□ -0.49
GFD1YMR255W TFC8Q12308 588 aa12□□□□□ -0.49
GFD1YMR255W YAH1Q12184 172 aaKnown RBP11.99□□□□□ -0.49
GFD1YMR255W YIL055CP40523 627 aaKnown RBP11.94□□□□□ -0.5
GFD1YMR255W SSP1P38871 571 aa11.91□□□□□ -0.5
GFD1YMR255W YLR271WQ06152 274 aa11.78□□□□□ -0.52
GFD1YMR255W RSM7P47150 247 aa11.74□□□□□ -0.53
GFD1YMR255W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.71□□□□□ -0.53not detected
GFD1YMR255W SCY1P53009 804 aa11.68□□□□□ -0.54
GFD1YMR255W BCH2P36122 765 aa11.67□□□□□ -0.54
GFD1YMR255W TIF4632P39936 914 aaKnown RBP11.64□□□□□ -0.55
GFD1YMR255W TGL3P40308 642 aa11.63□□□□□ -0.55
GFD1YMR255W RQC2Q12532 1038 aaKnown RBP11.6□□□□□ -0.55
GFD1YMR255W SLX5P32828 619 aaKnown RBP11.59□□□□□ -0.55
GFD1YMR255W SIS1P25294 352 aaKnown RBP11.56□□□□□ -0.56
GFD1YMR255W AI2P03876 854 aa11.55□□□□□ -0.56
GFD1YMR255W UBP9P39967 754 aa11.54□□□□□ -0.56
GFD1YMR255W MGA2P40578 1113 aa11.48□□□□□ -0.57
GFD1YMR255W EPS1P40557 701 aa11.47□□□□□ -0.57
GFD1YMR255W BBC1P47068 1157 aa11.45□□□□□ -0.58
GFD1YMR255W CST9Q06032 482 aa11.45□□□□□ -0.58
GFD1YMR255W PSD2P53037 1138 aaKnown RBP11.44□□□□□ -0.58
GFD1YMR255W DMA1P38823 416 aa11.42□□□□□ -0.58
GFD1YMR255W BDF1P35817 686 aa11.38□□□□□ -0.59
GFD1YMR255W MRM1P25270 412 aa11.22□□□□□ -0.61
GFD1YMR255W RCR1P38212 213 aa11.07□□□□□ -0.64
GFD1YMR255W MST1P07236 462 aa11.06□□□□□ -0.64
GFD1YMR255W RTG3P38165 486 aa11.01□□□□□ -0.65
GFD1YMR255W RAM2P29703 316 aa11□□□□□ -0.65
GFD1YMR255W YBL029C-AQ3E756 94 aa10.99□□□□□ -0.65
GFD1YMR255W YOR238WQ08634 303 aa10.94□□□□□ -0.66
GFD1YMR255W VPS29P38759 282 aa10.91□□□□□ -0.66
GFD1YMR255W VNX1P42839 908 aa10.85□□□□□ -0.67
GFD1YMR255W NSR1P27476 414 aaKnown RBP RIP-Chip data10.84□□□□□ -0.67not detected
GFD1YMR255W YMR1P47147 688 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68not detected
GFD1YMR255W YFR006WP43590 535 aa10.79□□□□□ -0.68
GFD1YMR255W MAK11P20484 414 aaKnown RBP10.78□□□□□ -0.68
GFD1YMR255W DBP1P24784 617 aaKnown RBP10.77□□□□□ -0.69
GFD1YMR255W STS1P38637 319 aa10.77□□□□□ -0.69
GFD1YMR255W PIB1Q06651 286 aa10.76□□□□□ -0.69
GFD1YMR255W SET1P38827 1080 aaKnown RBP10.75□□□□□ -0.69
GFD1YMR255W YAP5P40574 245 aa10.73□□□□□ -0.69
GFD1YMR255W SPP1Q03012 353 aa10.73□□□□□ -0.69
GFD1YMR255W SAS10Q12136 610 aaPredicted RBP10.71□□□□□ -0.69
GFD1YMR255W WSC3Q12215 556 aa10.68□□□□□ -0.7
GFD1YMR255W COQ8P27697 501 aa10.66□□□□□ -0.7
GFD1YMR255W MIF2P35201 549 aa10.66□□□□□ -0.7
GFD1YMR255W AIR2Q12476 344 aaKnown RBP10.62□□□□□ -0.71
GFD1YMR255W EDS1P38073 919 aa10.6□□□□□ -0.71
GFD1YMR255W TIF11P38912 153 aaKnown RBP10.58□□□□□ -0.72
GFD1YMR255W FKH1P40466 484 aa10.56□□□□□ -0.72
GFD1YMR255W VPS70P47161 811 aa10.56□□□□□ -0.72
GFD1YMR255W VMA1P17255 1071 aaKnown RBP10.54□□□□□ -0.72
GFD1YMR255W YJL171CP46992 396 aa10.53□□□□□ -0.72
GFD1YMR255W YPR148CQ06523 435 aa10.52□□□□□ -0.73
GFD1YMR255W IFH1P39520 1085 aa10.5□□□□□ -0.73
GFD1YMR255W GTT3P39996 337 aa10.5□□□□□ -0.73
GFD1YMR255W PTC3P34221 468 aaKnown RBP10.49□□□□□ -0.73
GFD1YMR255W NOP53Q12080 455 aaKnown RBP10.45□□□□□ -0.74
GFD1YMR255W LDB19Q12502 818 aa10.42□□□□□ -0.74
GFD1YMR255W CKB1P43639 278 aa10.4□□□□□ -0.74
GFD1YMR255W IOC2Q12072 812 aa10.4□□□□□ -0.74
GFD1YMR255W ULI1P43604 169 aa10.39□□□□□ -0.75
GFD1YMR255W SAM3Q08986 587 aa10.38□□□□□ -0.75
GFD1YMR255W SPB4P25808 606 aaPredicted RBP10.37□□□□□ -0.75
GFD1YMR255W GRE2Q12068 342 aaKnown RBP10.37□□□□□ -0.75
GFD1YMR255W ATH1P48016 1211 aa10.36□□□□□ -0.75
GFD1YMR255W GYP5Q12344 894 aa10.34□□□□□ -0.75
GFD1YMR255W SET4P42948 560 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms