RNA–Protein interactions for RNA: YMR199W

CLN1, Transcript of G1 cyclin involved in regulation of the cell cycle, yeastyeast

Gene CLN1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN1YMR199W MTC1P47018 478 aaKnown RBP14.26□□□□□ -0.13
CLN1YMR199W DRS1P32892 752 aaKnown RBP13.15□□□□□ -0.3
CLN1YMR199W FAP1P53971 965 aa12.95□□□□□ -0.34
CLN1YMR199W PRY3P47033 881 aa12.19□□□□□ -0.46
CLN1YMR199W PRI1P10363 409 aa12.1□□□□□ -0.47
CLN1YMR199W AAD16Q02895 342 aa12.03□□□□□ -0.48
CLN1YMR199W ISW2Q08773 1120 aa11.82□□□□□ -0.52
CLN1YMR199W RPG1P38249 964 aaKnown RBP11.71□□□□□ -0.53
CLN1YMR199W DIP2Q12220 943 aaPredicted RBP11.59□□□□□ -0.55
CLN1YMR199W YCK3P39962 524 aa11.57□□□□□ -0.56
CLN1YMR199W HAA1Q12753 694 aaKnown RBP11.43□□□□□ -0.58
CLN1YMR199W TSR3Q12094 313 aaKnown RBP11.42□□□□□ -0.58
CLN1YMR199W RSE1Q04693 1361 aaKnown RBP11.23□□□□□ -0.61
CLN1YMR199W AVT3P36062 692 aa11.15□□□□□ -0.62
CLN1YMR199W MRPL32P25348 183 aa10.95□□□□□ -0.66
CLN1YMR199W RPL17AP05740 184 aaKnown RBP10.89□□□□□ -0.67
CLN1YMR199W RPL17BP46990 184 aaKnown RBP10.89□□□□□ -0.67
CLN1YMR199W BFR2Q06631 534 aaKnown RBP10.86□□□□□ -0.67
CLN1YMR199W REB1P21538 810 aa10.84□□□□□ -0.67
CLN1YMR199W YGL015CP33199 130 aa10.55□□□□□ -0.72
CLN1YMR199W SPT21P35209 758 aa10.45□□□□□ -0.74
CLN1YMR199W CDC27P38042 758 aa10.43□□□□□ -0.74
CLN1YMR199W YKR023WP36119 530 aaKnown RBP10.36□□□□□ -0.75
CLN1YMR199W TFC8Q12308 588 aa10.14□□□□□ -0.79
CLN1YMR199W HOP09932 586 aa10.13□□□□□ -0.79
CLN1YMR199W UBP10P53874 792 aaPredicted RBP10.13□□□□□ -0.79
CLN1YMR199W MAP2P38174 421 aaKnown RBP10.1□□□□□ -0.79
CLN1YMR199W DCD1P06773 312 aa10.09□□□□□ -0.79
CLN1YMR199W RIM101P33400 625 aa10.04□□□□□ -0.8
CLN1YMR199W SCY1P53009 804 aa9.86□□□□□ -0.83
CLN1YMR199W BCH2P36122 765 aa9.8□□□□□ -0.84
CLN1YMR199W BUD31P25337 157 aaPredicted RBP9.74□□□□□ -0.85
CLN1YMR199W SLX5P32828 619 aaKnown RBP9.74□□□□□ -0.85
CLN1YMR199W NOP2P40991 618 aaKnown RBP9.73□□□□□ -0.85
CLN1YMR199W OXP1P28273 1286 aa9.71□□□□□ -0.85
CLN1YMR199W RQC2Q12532 1038 aaKnown RBP9.71□□□□□ -0.86
CLN1YMR199W TIF4632P39936 914 aaKnown RBP9.69□□□□□ -0.86
CLN1YMR199W TGL3P40308 642 aa9.67□□□□□ -0.86
CLN1YMR199W SPA2P23201 1466 aaKnown RBP9.62□□□□□ -0.87
CLN1YMR199W EPS1P40557 701 aa9.54□□□□□ -0.88
CLN1YMR199W PTP3P40048 928 aa9.52□□□□□ -0.89
CLN1YMR199W YIL055CP40523 627 aaKnown RBP9.52□□□□□ -0.89
CLN1YMR199W BDF1P35817 686 aa9.51□□□□□ -0.89
CLN1YMR199W SKI3P17883 1432 aaKnown RBP9.47□□□□□ -0.89
CLN1YMR199W TFA1P36100 482 aa9.45□□□□□ -0.9
CLN1YMR199W RSM7P47150 247 aa9.41□□□□□ -0.9
CLN1YMR199W NSR1P27476 414 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9not detected
CLN1YMR199W UBP9P39967 754 aa9.39□□□□□ -0.91
CLN1YMR199W SGS1P35187 1447 aa9.39□□□□□ -0.91
CLN1YMR199W SSN2P38931 1420 aa9.39□□□□□ -0.91
CLN1YMR199W YAH1Q12184 172 aaKnown RBP9.37□□□□□ -0.91
CLN1YMR199W AI2P03876 854 aa9.33□□□□□ -0.92
CLN1YMR199W BBC1P47068 1157 aa9.32□□□□□ -0.92
CLN1YMR199W CAB3P36076 571 aa9.31□□□□□ -0.92
CLN1YMR199W MST1P07236 462 aa9.27□□□□□ -0.92
CLN1YMR199W EBP2P36049 427 aaKnown RBP9.27□□□□□ -0.92
CLN1YMR199W SIS1P25294 352 aaKnown RBP9.24□□□□□ -0.93
CLN1YMR199W YLR271WQ06152 274 aa9.23□□□□□ -0.93
CLN1YMR199W YOR238WQ08634 303 aa9.21□□□□□ -0.93
CLN1YMR199W YAP5P40574 245 aa9.13□□□□□ -0.95
CLN1YMR199W PSD2P53037 1138 aaKnown RBP9.13□□□□□ -0.95
CLN1YMR199W YBL029C-AQ3E756 94 aa9.13□□□□□ -0.95
CLN1YMR199W SSP1P38871 571 aa9.06□□□□□ -0.96
CLN1YMR199W VNX1P42839 908 aa9.03□□□□□ -0.96
CLN1YMR199W ARP8Q12386 881 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
CLN1YMR199W MRM1P25270 412 aa8.98□□□□□ -0.97
CLN1YMR199W WSC3Q12215 556 aa8.95□□□□□ -0.98
CLN1YMR199W ENP1P38333 483 aaKnown RBP8.94□□□□□ -0.98
CLN1YMR199W YPR148CQ06523 435 aa8.94□□□□□ -0.98
CLN1YMR199W SIS2P36024 562 aa8.94□□□□□ -0.98
CLN1YMR199W INO80P53115 1489 aa8.93□□□□□ -0.98
CLN1YMR199W SPP1Q03012 353 aa8.92□□□□□ -0.98
CLN1YMR199W GTT3P39996 337 aa8.91□□□□□ -0.98
CLN1YMR199W CST9Q06032 482 aa8.9□□□□□ -0.99
CLN1YMR199W TCB3Q03640 1545 aaKnown RBP8.9□□□□□ -0.99
CLN1YMR199W URN1Q06525 465 aaKnown RBP8.89□□□□□ -0.99
CLN1YMR199W PIB1Q06651 286 aa8.89□□□□□ -0.99
CLN1YMR199W CHD1P32657 1468 aa8.87□□□□□ -0.99
CLN1YMR199W MGA2P40578 1113 aa8.87□□□□□ -0.99
CLN1YMR199W MMS22Q06164 1454 aa8.85□□□□□ -0.99
CLN1YMR199W TIF11P38912 153 aaKnown RBP8.85□□□□□ -0.99
CLN1YMR199W VPS29P38759 282 aa8.81□□□□□ -1
CLN1YMR199W RTG3P38165 486 aa8.78□□□□□ -1
CLN1YMR199W YMR1P47147 688 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
CLN1YMR199W UFD4P33202 1483 aa8.76□□□□□ -1.01
CLN1YMR199W FKH1P40466 484 aa8.76□□□□□ -1.01
CLN1YMR199W AIR2Q12476 344 aaKnown RBP8.76□□□□□ -1.01
CLN1YMR199W DBP1P24784 617 aaKnown RBP8.75□□□□□ -1.01
CLN1YMR199W ULI1P43604 169 aa8.74□□□□□ -1.01
CLN1YMR199W IOC2Q12072 812 aa8.74□□□□□ -1.01
CLN1YMR199W STH1P32597 1359 aa8.73□□□□□ -1.01
CLN1YMR199W STS1P38637 319 aa8.72□□□□□ -1.01
CLN1YMR199W YFR006WP43590 535 aa8.72□□□□□ -1.01
CLN1YMR199W MSB4Q12317 492 aa8.72□□□□□ -1.01
CLN1YMR199W RCR1P38212 213 aa8.71□□□□□ -1.02
CLN1YMR199W TAF7Q05021 590 aa8.71□□□□□ -1.02
CLN1YMR199W LDB19Q12502 818 aa8.71□□□□□ -1.02
CLN1YMR199W SPP41P38904 1435 aa8.7□□□□□ -1.02
CLN1YMR199W POL5P39985 1022 aaKnown RBP8.69□□□□□ -1.02
CLN1YMR199W TCB2P48231 1178 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms