RNA–Protein interactions for RNA: YMR175W

SIP18, Transcript of Phospholipid-binding hydrophilin, yeastyeast

Gene SIP18, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIP18YMR175W MTC1P47018 478 aaKnown RBP9.68□□□□□ -0.86
SIP18YMR175W DRS1P32892 752 aaKnown RBP9.46□□□□□ -0.9
SIP18YMR175W FAP1P53971 965 aa8.26□□□□□ -1.09
SIP18YMR175W DIP2Q12220 943 aaPredicted RBP8.16□□□□□ -1.1
SIP18YMR175W BFR2Q06631 534 aaKnown RBP8.06□□□□□ -1.12
SIP18YMR175W AVT3P36062 692 aa7.97□□□□□ -1.13
SIP18YMR175W PRI1P10363 409 aa7.95□□□□□ -1.14
SIP18YMR175W ISW2Q08773 1120 aa7.93□□□□□ -1.14
SIP18YMR175W RPG1P38249 964 aaKnown RBP7.87□□□□□ -1.15
SIP18YMR175W AAD16Q02895 342 aa7.85□□□□□ -1.15
SIP18YMR175W RSE1Q04693 1361 aaKnown RBP7.75□□□□□ -1.17
SIP18YMR175W PRY3P47033 881 aa7.75□□□□□ -1.17
SIP18YMR175W TSR3Q12094 313 aaKnown RBP7.55□□□□□ -1.2
SIP18YMR175W RPL17AP05740 184 aaKnown RBP7.5□□□□□ -1.21
SIP18YMR175W RPL17BP46990 184 aaKnown RBP7.5□□□□□ -1.21
SIP18YMR175W REB1P21538 810 aa7.41□□□□□ -1.22
SIP18YMR175W TFA1P36100 482 aa7.39□□□□□ -1.23
SIP18YMR175W YCK3P39962 524 aa7.35□□□□□ -1.23
SIP18YMR175W HAA1Q12753 694 aaKnown RBP7.29□□□□□ -1.24
SIP18YMR175W MRPL32P25348 183 aa7.24□□□□□ -1.25
SIP18YMR175W SPT21P35209 758 aa7.18□□□□□ -1.26
SIP18YMR175W RIM101P33400 625 aa7.05□□□□□ -1.28
SIP18YMR175W YKR023WP36119 530 aaKnown RBP7.04□□□□□ -1.28
SIP18YMR175W CDC27P38042 758 aa6.95□□□□□ -1.3
SIP18YMR175W HOP09932 586 aa6.91□□□□□ -1.3
SIP18YMR175W TFC8Q12308 588 aa6.89□□□□□ -1.31
SIP18YMR175W DCD1P06773 312 aa6.86□□□□□ -1.31
SIP18YMR175W OXP1P28273 1286 aa6.83□□□□□ -1.32
SIP18YMR175W YGL015CP33199 130 aa6.82□□□□□ -1.32
SIP18YMR175W YIL055CP40523 627 aaKnown RBP6.73□□□□□ -1.33
SIP18YMR175W BCH2P36122 765 aa6.69□□□□□ -1.34
SIP18YMR175W MAP2P38174 421 aaKnown RBP6.69□□□□□ -1.34
SIP18YMR175W PTP3P40048 928 aa6.69□□□□□ -1.34
SIP18YMR175W YAH1Q12184 172 aaKnown RBP6.69□□□□□ -1.34
SIP18YMR175W UBP10P53874 792 aaPredicted RBP6.65□□□□□ -1.34
SIP18YMR175W RSM7P47150 247 aa6.62□□□□□ -1.35
SIP18YMR175W SCY1P53009 804 aa6.62□□□□□ -1.35
SIP18YMR175W SSP1P38871 571 aa6.61□□□□□ -1.35
SIP18YMR175W YLR271WQ06152 274 aa6.59□□□□□ -1.35
SIP18YMR175W AI2P03876 854 aa6.53□□□□□ -1.36
SIP18YMR175W EPS1P40557 701 aa6.53□□□□□ -1.36
SIP18YMR175W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
SIP18YMR175W BDF1P35817 686 aa6.51□□□□□ -1.37
SIP18YMR175W SLX5P32828 619 aaKnown RBP6.5□□□□□ -1.37
SIP18YMR175W BBC1P47068 1157 aa6.49□□□□□ -1.37
SIP18YMR175W PSD2P53037 1138 aaKnown RBP6.43□□□□□ -1.38
SIP18YMR175W TIF4632P39936 914 aaKnown RBP6.4□□□□□ -1.38
SIP18YMR175W MGA2P40578 1113 aa6.39□□□□□ -1.39
SIP18YMR175W BUD31P25337 157 aaPredicted RBP6.38□□□□□ -1.39
SIP18YMR175W TGL3P40308 642 aa6.38□□□□□ -1.39
SIP18YMR175W CST9Q06032 482 aa6.38□□□□□ -1.39
SIP18YMR175W MRM1P25270 412 aa6.31□□□□□ -1.4
SIP18YMR175W RTG3P38165 486 aa6.21□□□□□ -1.42
SIP18YMR175W NSR1P27476 414 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
SIP18YMR175W RCR1P38212 213 aa6.18□□□□□ -1.42
SIP18YMR175W VPS29P38759 282 aa6.18□□□□□ -1.42
SIP18YMR175W YAP5P40574 245 aa6.17□□□□□ -1.42
SIP18YMR175W YOR238WQ08634 303 aa6.17□□□□□ -1.42
SIP18YMR175W MST1P07236 462 aa6.16□□□□□ -1.42
SIP18YMR175W YMR1P47147 688 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SIP18YMR175W RAM2P29703 316 aa6.11□□□□□ -1.43
SIP18YMR175W PIB1Q06651 286 aa6.11□□□□□ -1.43
SIP18YMR175W DBP1P24784 617 aaKnown RBP6.1□□□□□ -1.43
SIP18YMR175W YFR006WP43590 535 aa6.09□□□□□ -1.43
SIP18YMR175W STS1P38637 319 aa6.08□□□□□ -1.44
SIP18YMR175W UBP9P39967 754 aa6.05□□□□□ -1.44
SIP18YMR175W SIS1P25294 352 aaKnown RBP6.03□□□□□ -1.44
SIP18YMR175W MAK11P20484 414 aaKnown RBP6.02□□□□□ -1.45
SIP18YMR175W DMA1P38823 416 aa6.01□□□□□ -1.45
SIP18YMR175W GTT3P39996 337 aa6.01□□□□□ -1.45
SIP18YMR175W YBL029C-AQ3E756 94 aa5.99□□□□□ -1.45
SIP18YMR175W VMA1P17255 1071 aaKnown RBP5.98□□□□□ -1.45
SIP18YMR175W WSC3Q12215 556 aa5.98□□□□□ -1.45
SIP18YMR175W MIF2P35201 549 aa5.96□□□□□ -1.46
SIP18YMR175W VNX1P42839 908 aa5.96□□□□□ -1.46
SIP18YMR175W COQ8P27697 501 aa5.95□□□□□ -1.46
SIP18YMR175W EDS1P38073 919 aa5.94□□□□□ -1.46
SIP18YMR175W SAM3Q08986 587 aa5.94□□□□□ -1.46
SIP18YMR175W RQC2Q12532 1038 aaKnown RBP5.93□□□□□ -1.46
SIP18YMR175W SET1P38827 1080 aaKnown RBP5.91□□□□□ -1.46
SIP18YMR175W PTC3P34221 468 aaKnown RBP5.9□□□□□ -1.46
SIP18YMR175W SET4P42948 560 aa5.9□□□□□ -1.46
SIP18YMR175W SPP1Q03012 353 aa5.9□□□□□ -1.46
SIP18YMR175W YOL036WQ08206 761 aa5.9□□□□□ -1.46
SIP18YMR175W GYP5Q12344 894 aa5.89□□□□□ -1.47
SIP18YMR175W TIF11P38912 153 aaKnown RBP5.88□□□□□ -1.47
SIP18YMR175W NOP53Q12080 455 aaKnown RBP5.87□□□□□ -1.47
SIP18YMR175W MSB4Q12317 492 aa5.87□□□□□ -1.47
SIP18YMR175W ULI1P43604 169 aa5.86□□□□□ -1.47
SIP18YMR175W GRE2Q12068 342 aaKnown RBP5.85□□□□□ -1.47
SIP18YMR175W DCW1P36091 449 aa5.84□□□□□ -1.47
SIP18YMR175W EAP1P36041 632 aaKnown RBP5.83□□□□□ -1.48
SIP18YMR175W ATH1P48016 1211 aa5.83□□□□□ -1.48
SIP18YMR175W IOC2Q12072 812 aa5.83□□□□□ -1.48
SIP18YMR175W TRP5P00931 707 aaKnown RBP5.82□□□□□ -1.48
SIP18YMR175W GUT1P32190 709 aa5.82□□□□□ -1.48
SIP18YMR175W ABP1P15891 592 aaKnown RBP5.8□□□□□ -1.48
SIP18YMR175W HTA1P04911 132 aaKnown RBP5.79□□□□□ -1.48
SIP18YMR175W HTA2P04912 132 aa5.79□□□□□ -1.48
SIP18YMR175W LDB19Q12502 818 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms