RNA–Protein interactions for RNA: YMR106C

YKU80, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeastyeast

Gene YKU80, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKU80YMR106C MTC1P47018 478 aaKnown RBP6.36□□□□□ -1.39
YKU80YMR106C DRS1P32892 752 aaKnown RBP6.22□□□□□ -1.41
YKU80YMR106C FAP1P53971 965 aa5.41□□□□□ -1.54
YKU80YMR106C DIP2Q12220 943 aaPredicted RBP5.37□□□□□ -1.55
YKU80YMR106C BFR2Q06631 534 aaKnown RBP5.33□□□□□ -1.56
YKU80YMR106C AVT3P36062 692 aa5.24□□□□□ -1.57
YKU80YMR106C PRI1P10363 409 aa5.21□□□□□ -1.58
YKU80YMR106C ISW2Q08773 1120 aa5.2□□□□□ -1.58
YKU80YMR106C RPG1P38249 964 aaKnown RBP5.15□□□□□ -1.58
YKU80YMR106C AAD16Q02895 342 aa5.13□□□□□ -1.59
YKU80YMR106C RSE1Q04693 1361 aaKnown RBP5.08□□□□□ -1.6
YKU80YMR106C PRY3P47033 881 aa5.07□□□□□ -1.6
YKU80YMR106C TFA1P36100 482 aa5□□□□□ -1.61
YKU80YMR106C TSR3Q12094 313 aaKnown RBP4.95□□□□□ -1.62
YKU80YMR106C RPL17AP05740 184 aaKnown RBP4.91□□□□□ -1.62
YKU80YMR106C RPL17BP46990 184 aaKnown RBP4.91□□□□□ -1.62
YKU80YMR106C REB1P21538 810 aa4.86□□□□□ -1.63
YKU80YMR106C YCK3P39962 524 aa4.82□□□□□ -1.64
YKU80YMR106C HAA1Q12753 694 aaKnown RBP4.77□□□□□ -1.65
YKU80YMR106C MRPL32P25348 183 aa4.73□□□□□ -1.65
YKU80YMR106C SPT21P35209 758 aa4.73□□□□□ -1.65
YKU80YMR106C RIM101P33400 625 aa4.63□□□□□ -1.67
YKU80YMR106C YKR023WP36119 530 aaKnown RBP4.62□□□□□ -1.67
YKU80YMR106C CDC27P38042 758 aa4.57□□□□□ -1.68
YKU80YMR106C HOP09932 586 aa4.54□□□□□ -1.68
YKU80YMR106C TFC8Q12308 588 aa4.53□□□□□ -1.68
YKU80YMR106C DCD1P06773 312 aa4.52□□□□□ -1.69
YKU80YMR106C OXP1P28273 1286 aa4.49□□□□□ -1.69
YKU80YMR106C YGL015CP33199 130 aa4.47□□□□□ -1.69
YKU80YMR106C RQC2Q12532 1038 aaKnown RBP4.42□□□□□ -1.7
YKU80YMR106C YIL055CP40523 627 aaKnown RBP4.41□□□□□ -1.7
YKU80YMR106C BCH2P36122 765 aa4.4□□□□□ -1.71
YKU80YMR106C PTP3P40048 928 aa4.39□□□□□ -1.71
YKU80YMR106C YAH1Q12184 172 aaKnown RBP4.39□□□□□ -1.71
YKU80YMR106C MAP2P38174 421 aaKnown RBP4.39□□□□□ -1.71
YKU80YMR106C UBP10P53874 792 aaPredicted RBP4.37□□□□□ -1.71
YKU80YMR106C SSP1P38871 571 aa4.35□□□□□ -1.71
YKU80YMR106C RSM7P47150 247 aa4.35□□□□□ -1.71
YKU80YMR106C SCY1P53009 804 aa4.35□□□□□ -1.71
YKU80YMR106C YLR271WQ06152 274 aa4.34□□□□□ -1.71
YKU80YMR106C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
YKU80YMR106C EPS1P40557 701 aa4.29□□□□□ -1.72
YKU80YMR106C AI2P03876 854 aa4.28□□□□□ -1.72
YKU80YMR106C BDF1P35817 686 aa4.28□□□□□ -1.72
YKU80YMR106C SLX5P32828 619 aaKnown RBP4.26□□□□□ -1.73
YKU80YMR106C BBC1P47068 1157 aa4.25□□□□□ -1.73
YKU80YMR106C TAF7Q05021 590 aa4.24□□□□□ -1.73
YKU80YMR106C PSD2P53037 1138 aaKnown RBP4.23□□□□□ -1.73
YKU80YMR106C MGA2P40578 1113 aa4.21□□□□□ -1.74
YKU80YMR106C CST9Q06032 482 aa4.2□□□□□ -1.74
YKU80YMR106C TIF4632P39936 914 aaKnown RBP4.2□□□□□ -1.74
YKU80YMR106C TGL3P40308 642 aa4.18□□□□□ -1.74
YKU80YMR106C MRM1P25270 412 aa4.15□□□□□ -1.75
YKU80YMR106C DMA1P38823 416 aa4.1□□□□□ -1.75
YKU80YMR106C RCR1P38212 213 aa4.08□□□□□ -1.76
YKU80YMR106C RTG3P38165 486 aa4.07□□□□□ -1.76
YKU80YMR106C NSR1P27476 414 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
YKU80YMR106C BUD31P25337 157 aaPredicted RBP4.06□□□□□ -1.76
YKU80YMR106C VPS29P38759 282 aa4.05□□□□□ -1.76
YKU80YMR106C MST1P07236 462 aa4.05□□□□□ -1.76
YKU80YMR106C YAP5P40574 245 aa4.05□□□□□ -1.76
YKU80YMR106C YOR238WQ08634 303 aa4.04□□□□□ -1.76
YKU80YMR106C RAM2P29703 316 aa4.02□□□□□ -1.77
YKU80YMR106C YMR1P47147 688 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
YKU80YMR106C PIB1Q06651 286 aa4.01□□□□□ -1.77
YKU80YMR106C DBP1P24784 617 aaKnown RBP4.01□□□□□ -1.77
YKU80YMR106C STS1P38637 319 aa4.01□□□□□ -1.77
YKU80YMR106C YFR006WP43590 535 aa4□□□□□ -1.77
YKU80YMR106C MAK11P20484 414 aaKnown RBP3.96□□□□□ -1.78
YKU80YMR106C UBP9P39967 754 aa3.95□□□□□ -1.78
YKU80YMR106C GTT3P39996 337 aa3.94□□□□□ -1.78
YKU80YMR106C YBL029C-AQ3E756 94 aa3.94□□□□□ -1.78
YKU80YMR106C VMA1P17255 1071 aaKnown RBP3.93□□□□□ -1.78
YKU80YMR106C MIF2P35201 549 aa3.92□□□□□ -1.78
YKU80YMR106C SET1P38827 1080 aaKnown RBP3.92□□□□□ -1.78
YKU80YMR106C WSC3Q12215 556 aa3.92□□□□□ -1.78
YKU80YMR106C COQ8P27697 501 aa3.91□□□□□ -1.78
YKU80YMR106C IFH1P39520 1085 aa3.91□□□□□ -1.78
YKU80YMR106C SAS10Q12136 610 aaPredicted RBP3.91□□□□□ -1.78
YKU80YMR106C EDS1P38073 919 aa3.9□□□□□ -1.78
YKU80YMR106C VNX1P42839 908 aa3.9□□□□□ -1.78
YKU80YMR106C NOP53Q12080 455 aaKnown RBP3.9□□□□□ -1.78
YKU80YMR106C SAM3Q08986 587 aa3.9□□□□□ -1.79
YKU80YMR106C SET4P42948 560 aa3.88□□□□□ -1.79
YKU80YMR106C YOL036WQ08206 761 aa3.88□□□□□ -1.79
YKU80YMR106C PTC3P34221 468 aaKnown RBP3.87□□□□□ -1.79
YKU80YMR106C SPP1Q03012 353 aa3.87□□□□□ -1.79
YKU80YMR106C MSB4Q12317 492 aa3.86□□□□□ -1.79
YKU80YMR106C GYP5Q12344 894 aa3.86□□□□□ -1.79
YKU80YMR106C TIF11P38912 153 aaKnown RBP3.85□□□□□ -1.79
YKU80YMR106C CKB1P43639 278 aa3.85□□□□□ -1.79
YKU80YMR106C YPR148CQ06523 435 aa3.84□□□□□ -1.79
YKU80YMR106C GRE2Q12068 342 aaKnown RBP3.84□□□□□ -1.79
YKU80YMR106C ULI1P43604 169 aa3.84□□□□□ -1.8
YKU80YMR106C DCW1P36091 449 aa3.83□□□□□ -1.8
YKU80YMR106C VPS70P47161 811 aa3.83□□□□□ -1.8
YKU80YMR106C TRP5P00931 707 aaKnown RBP3.82□□□□□ -1.8
YKU80YMR106C GUT1P32190 709 aa3.82□□□□□ -1.8
YKU80YMR106C EAP1P36041 632 aaKnown RBP3.82□□□□□ -1.8
YKU80YMR106C ATH1P48016 1211 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms