RNA–Protein interactions for RNA: YLR401C

DUS3, Transcript of Dihydrouridine synthase, yeastyeast

Gene DUS3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DUS3YLR401C MON2P48563 1636 aaPredicted RBP12.6□□□□□ -0.39
DUS3YLR401C INO80P53115 1489 aa12.59□□□□□ -0.39
DUS3YLR401C SGS1P35187 1447 aa12.39□□□□□ -0.43
DUS3YLR401C SPA2P23201 1466 aaKnown RBP12.38□□□□□ -0.43
DUS3YLR401C TCB3Q03640 1545 aaKnown RBP12.3□□□□□ -0.44
DUS3YLR401C TY1B-DR4Q07793 1604 aa12.18□□□□□ -0.46
DUS3YLR401C SWR1Q05471 1514 aa12.17□□□□□ -0.46
DUS3YLR401C SSN2P38931 1420 aa12.16□□□□□ -0.46
DUS3YLR401C DNA2P38859 1522 aa12.02□□□□□ -0.49
DUS3YLR401C HSL1P34244 1518 aa11.88□□□□□ -0.51
DUS3YLR401C KOG1P38873 1557 aa11.87□□□□□ -0.51
DUS3YLR401C SPT6P23615 1451 aaKnown RBP11.86□□□□□ -0.51
DUS3YLR401C SKI3P17883 1432 aaKnown RBP11.82□□□□□ -0.52
DUS3YLR401C DRS1P32892 752 aaKnown RBP11.74□□□□□ -0.53
DUS3YLR401C NOP2P40991 618 aaKnown RBP11.64□□□□□ -0.55
DUS3YLR401C HIR3P47171 1648 aa11.63□□□□□ -0.55
DUS3YLR401C BFR2Q06631 534 aaKnown RBP11.55□□□□□ -0.56
DUS3YLR401C NSR1P27476 414 aaKnown RBP RIP-Chip data11.5□□□□□ -0.57not detected
DUS3YLR401C XRN1P22147 1528 aaKnown RBP11.49□□□□□ -0.57
DUS3YLR401C ECM5Q03214 1411 aa11.46□□□□□ -0.58
DUS3YLR401C BUD4P47136 1447 aa11.42□□□□□ -0.58
DUS3YLR401C THO2P53552 1597 aaKnown RBP11.4□□□□□ -0.58
DUS3YLR401C RSE1Q04693 1361 aaKnown RBP11.37□□□□□ -0.59
DUS3YLR401C MMS22Q06164 1454 aa11.33□□□□□ -0.6
DUS3YLR401C CHD1P32657 1468 aa11.32□□□□□ -0.6
DUS3YLR401C REV3P14284 1504 aa11.3□□□□□ -0.6
DUS3YLR401C MDS3P53094 1487 aa11.27□□□□□ -0.61
DUS3YLR401C TAF2P23255 1407 aa11.19□□□□□ -0.62
DUS3YLR401C PEP1P32319 1579 aa11.18□□□□□ -0.62
DUS3YLR401C ATG2P53855 1592 aa11.18□□□□□ -0.62
DUS3YLR401C SIN3P22579 1536 aa11.17□□□□□ -0.62
DUS3YLR401C UFD4P33202 1483 aa11.14□□□□□ -0.63
DUS3YLR401C SSK2P53599 1579 aa11.09□□□□□ -0.63
DUS3YLR401C ESP1Q03018 1630 aa10.99□□□□□ -0.65
DUS3YLR401C MTC1P47018 478 aaKnown RBP10.98□□□□□ -0.65
DUS3YLR401C TRM732Q03496 1420 aa10.98□□□□□ -0.65
DUS3YLR401C ENP1P38333 483 aaKnown RBP10.92□□□□□ -0.66
DUS3YLR401C BPT1P14772 1559 aa10.92□□□□□ -0.66
DUS3YLR401C SPP41P38904 1435 aa10.91□□□□□ -0.66
DUS3YLR401C YPK9Q12697 1472 aa10.89□□□□□ -0.67
DUS3YLR401C MYO2P19524 1574 aaKnown RBP10.89□□□□□ -0.67
DUS3YLR401C IKI3Q06706 1349 aaKnown RBP10.88□□□□□ -0.67
DUS3YLR401C STU1P38198 1513 aa10.86□□□□□ -0.67
DUS3YLR401C SCC2Q04002 1493 aa10.85□□□□□ -0.67
DUS3YLR401C CAB3P36076 571 aa10.82□□□□□ -0.68
DUS3YLR401C EBP2P36049 427 aaKnown RBP10.82□□□□□ -0.68
DUS3YLR401C SAS10Q12136 610 aaPredicted RBP10.8□□□□□ -0.68
DUS3YLR401C RPO31P04051 1460 aa10.79□□□□□ -0.68
DUS3YLR401C STH1P32597 1359 aa10.78□□□□□ -0.68
DUS3YLR401C POL1P13382 1468 aa10.76□□□□□ -0.69
DUS3YLR401C NUP170P38181 1502 aa10.75□□□□□ -0.69
DUS3YLR401C YCF1P39109 1515 aaKnown RBP10.75□□□□□ -0.69
DUS3YLR401C YTA7P40340 1379 aa10.75□□□□□ -0.69
DUS3YLR401C SSM4P40318 1319 aa10.74□□□□□ -0.69
DUS3YLR401C POL5P39985 1022 aaKnown RBP10.74□□□□□ -0.69
DUS3YLR401C YPR148CQ06523 435 aa10.72□□□□□ -0.69
DUS3YLR401C SPT7P35177 1332 aa10.71□□□□□ -0.69
DUS3YLR401C TOP2P06786 1428 aaKnown RBP10.65□□□□□ -0.7
DUS3YLR401C RQC2Q12532 1038 aaKnown RBP10.65□□□□□ -0.71
DUS3YLR401C SEC3P33332 1336 aaKnown RBP10.64□□□□□ -0.71
DUS3YLR401C RKR1Q04781 1562 aa10.62□□□□□ -0.71
DUS3YLR401C TY2B-LR1P0C2J3 1770 aa10.62□□□□□ -0.71
DUS3YLR401C TY2B-FP0CX63 1770 aa10.62□□□□□ -0.71
DUS3YLR401C TY2B-GR2P0CX64 1770 aa10.62□□□□□ -0.71
DUS3YLR401C TY2B-CP25384 1770 aa10.62□□□□□ -0.71
DUS3YLR401C TY2B-DR2Q03494 1770 aa10.62□□□□□ -0.71
DUS3YLR401C TY1B-DR1Q03855 1755 aa10.62□□□□□ -0.71
DUS3YLR401C TY2B-DR3Q07791 1770 aaKnown RBP10.62□□□□□ -0.71
DUS3YLR401C TY2B-OR1Q12113 1770 aa10.62□□□□□ -0.71
DUS3YLR401C TY2B-DR1Q12472 1770 aa10.62□□□□□ -0.71
DUS3YLR401C TY2B-OR2Q12501 1770 aa10.62□□□□□ -0.71
DUS3YLR401C PRS1P32895 427 aaKnown RBP10.61□□□□□ -0.71
DUS3YLR401C CDC25P04821 1589 aa10.61□□□□□ -0.71
DUS3YLR401C PDR10P51533 1564 aa10.57□□□□□ -0.72
DUS3YLR401C MYO4P32492 1471 aa10.56□□□□□ -0.72
DUS3YLR401C YOR1P53049 1477 aa10.56□□□□□ -0.72
DUS3YLR401C PAN1P32521 1480 aa10.54□□□□□ -0.72
DUS3YLR401C MLP2P40457 1679 aa10.53□□□□□ -0.72
DUS3YLR401C SMC4Q12267 1418 aa10.53□□□□□ -0.72
DUS3YLR401C TY1B-BRQ12193 1756 aa10.53□□□□□ -0.72
DUS3YLR401C TY1B-GR3Q12316 1755 aa10.53□□□□□ -0.72
DUS3YLR401C TY1B-ORQ92393 1755 aa10.53□□□□□ -0.72
DUS3YLR401C DNF1P32660 1571 aa10.53□□□□□ -0.72
DUS3YLR401C RTT106P40161 455 aa10.52□□□□□ -0.73
DUS3YLR401C TY2B-BQ12491 1770 aa10.5□□□□□ -0.73
DUS3YLR401C TY1B-DR3Q99231 1755 aa10.5□□□□□ -0.73
DUS3YLR401C SNQ2P32568 1501 aaKnown RBP10.49□□□□□ -0.73
DUS3YLR401C TFA1P36100 482 aa10.48□□□□□ -0.73
DUS3YLR401C ESC1Q03661 1658 aaKnown RBP10.47□□□□□ -0.73
DUS3YLR401C TY1B-HO13535 1793 aa10.46□□□□□ -0.74
DUS3YLR401C TY1B-DR5P0C2I2 1755 aa10.46□□□□□ -0.74
DUS3YLR401C TY1B-DR6P0C2I3 1755 aa10.46□□□□□ -0.74
DUS3YLR401C TY1B-LR2P0C2I5 1755 aa10.46□□□□□ -0.74
DUS3YLR401C TY1B-LR3P0C2I6 1755 aaKnown RBP10.46□□□□□ -0.74
DUS3YLR401C TY1B-PR1P0C2I9 1755 aaKnown RBP10.46□□□□□ -0.74
DUS3YLR401C TY1B-PR2P0C2J0 1756 aa10.46□□□□□ -0.74
DUS3YLR401C TY1B-PR3P0C2J1 1755 aaKnown RBP10.46□□□□□ -0.74
DUS3YLR401C TY1B-JR1P47098 1755 aa10.46□□□□□ -0.74
DUS3YLR401C TY1B-ML2Q03434 1755 aaKnown RBP10.46□□□□□ -0.74
DUS3YLR401C TY1B-ER1Q03612 1755 aa10.46□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms