RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W MTC1P47018 478 aaKnown RBP11.06□□□□□ -0.64
RPP0YLR340W MON2P48563 1636 aaPredicted RBP10.55□□□□□ -0.72
RPP0YLR340W INO80P53115 1489 aa10.52□□□□□ -0.73
RPP0YLR340W DRS1P32892 752 aaKnown RBP10.25□□□□□ -0.77
RPP0YLR340W FAP1P53971 965 aa10.07□□□□□ -0.8
RPP0YLR340W DNA2P38859 1522 aa10.04□□□□□ -0.8
RPP0YLR340W SWR1Q05471 1514 aa9.95□□□□□ -0.82
RPP0YLR340W KOG1P38873 1557 aa9.86□□□□□ -0.83
RPP0YLR340W RSE1Q04693 1361 aaKnown RBP9.77□□□□□ -0.84
RPP0YLR340W TY1B-DR4Q07793 1604 aa9.77□□□□□ -0.85
RPP0YLR340W TCB3Q03640 1545 aaKnown RBP9.76□□□□□ -0.85
RPP0YLR340W PRY3P47033 881 aa9.46□□□□□ -0.9
RPP0YLR340W SGS1P35187 1447 aa9.44□□□□□ -0.9
RPP0YLR340W PRI1P10363 409 aa9.39□□□□□ -0.91
RPP0YLR340W HSL1P34244 1518 aa9.38□□□□□ -0.91
RPP0YLR340W SPT6P23615 1451 aaKnown RBP9.37□□□□□ -0.91
RPP0YLR340W AAD16Q02895 342 aa9.35□□□□□ -0.91
RPP0YLR340W SPA2P23201 1466 aaKnown RBP9.31□□□□□ -0.92
RPP0YLR340W ECM5Q03214 1411 aa9.26□□□□□ -0.93
RPP0YLR340W ISW2Q08773 1120 aa9.19□□□□□ -0.94
RPP0YLR340W THO2P53552 1597 aaKnown RBP9.16□□□□□ -0.94
RPP0YLR340W BUD4P47136 1447 aa9.16□□□□□ -0.94
RPP0YLR340W HIR3P47171 1648 aa9.16□□□□□ -0.94
RPP0YLR340W RPG1P38249 964 aaKnown RBP9.12□□□□□ -0.95
RPP0YLR340W MDS3P53094 1487 aa9.1□□□□□ -0.95
RPP0YLR340W DIP2Q12220 943 aaPredicted RBP9.03□□□□□ -0.96
RPP0YLR340W REV3P14284 1504 aa8.99□□□□□ -0.97
RPP0YLR340W PEP1P32319 1579 aa8.99□□□□□ -0.97
RPP0YLR340W XRN1P22147 1528 aaKnown RBP8.95□□□□□ -0.98
RPP0YLR340W YCK3P39962 524 aa8.93□□□□□ -0.98
RPP0YLR340W ATG2P53855 1592 aa8.88□□□□□ -0.99
RPP0YLR340W TSR3Q12094 313 aaKnown RBP8.88□□□□□ -0.99
RPP0YLR340W HAA1Q12753 694 aaKnown RBP8.88□□□□□ -0.99
RPP0YLR340W BPT1P14772 1559 aa8.87□□□□□ -0.99
RPP0YLR340W YCF1P39109 1515 aaKnown RBP8.72□□□□□ -1.01
RPP0YLR340W SKI3P17883 1432 aaKnown RBP8.69□□□□□ -1.02
RPP0YLR340W SSK2P53599 1579 aa8.69□□□□□ -1.02
RPP0YLR340W TAF2P23255 1407 aa8.66□□□□□ -1.02
RPP0YLR340W AVT3P36062 692 aa8.66□□□□□ -1.02
RPP0YLR340W SIN3P22579 1536 aa8.65□□□□□ -1.02
RPP0YLR340W MIF2P35201 549 aa8.6□□□□□ -1.03
RPP0YLR340W SSN2P38931 1420 aa8.59□□□□□ -1.03
RPP0YLR340W UFD4P33202 1483 aa8.56□□□□□ -1.04
RPP0YLR340W MRPL32P25348 183 aa8.53□□□□□ -1.04
RPP0YLR340W ESP1Q03018 1630 aa8.53□□□□□ -1.04
RPP0YLR340W MYO2P19524 1574 aaKnown RBP8.49□□□□□ -1.05
RPP0YLR340W MET5P47169 1442 aa8.49□□□□□ -1.05
RPP0YLR340W RPL17AP05740 184 aaKnown RBP8.48□□□□□ -1.05
RPP0YLR340W RPL17BP46990 184 aaKnown RBP8.48□□□□□ -1.05
RPP0YLR340W SCC2Q04002 1493 aa8.47□□□□□ -1.05
RPP0YLR340W BFR2Q06631 534 aaKnown RBP8.47□□□□□ -1.05
RPP0YLR340W DNF1P32660 1571 aa8.47□□□□□ -1.05
RPP0YLR340W CHD1P32657 1468 aa8.46□□□□□ -1.05
RPP0YLR340W LTE1P07866 1435 aa8.46□□□□□ -1.06
RPP0YLR340W CDC25P04821 1589 aa8.45□□□□□ -1.06
RPP0YLR340W REB1P21538 810 aa8.44□□□□□ -1.06
RPP0YLR340W YPK9Q12697 1472 aa8.44□□□□□ -1.06
RPP0YLR340W ESC1Q03661 1658 aaKnown RBP8.43□□□□□ -1.06
RPP0YLR340W BNI1P41832 1953 aa8.41□□□□□ -1.06
RPP0YLR340W RPO31P04051 1460 aa8.41□□□□□ -1.06
RPP0YLR340W RPA190P10964 1664 aaKnown RBP8.39□□□□□ -1.07
RPP0YLR340W RKR1Q04781 1562 aa8.38□□□□□ -1.07
RPP0YLR340W TY2B-LR1P0C2J3 1770 aa8.38□□□□□ -1.07
RPP0YLR340W TY2B-FP0CX63 1770 aa8.38□□□□□ -1.07
RPP0YLR340W TY2B-GR2P0CX64 1770 aa8.38□□□□□ -1.07
RPP0YLR340W TY2B-CP25384 1770 aa8.38□□□□□ -1.07
RPP0YLR340W TY2B-DR2Q03494 1770 aa8.38□□□□□ -1.07
RPP0YLR340W TY1B-DR1Q03855 1755 aa8.38□□□□□ -1.07
RPP0YLR340W TY2B-DR3Q07791 1770 aaKnown RBP8.38□□□□□ -1.07
RPP0YLR340W TY2B-OR1Q12113 1770 aa8.38□□□□□ -1.07
RPP0YLR340W TY1B-BRQ12193 1756 aa8.38□□□□□ -1.07
RPP0YLR340W TY1B-GR3Q12316 1755 aa8.38□□□□□ -1.07
RPP0YLR340W TY2B-DR1Q12472 1770 aa8.38□□□□□ -1.07
RPP0YLR340W TY2B-OR2Q12501 1770 aa8.38□□□□□ -1.07
RPP0YLR340W TY1B-ORQ92393 1755 aa8.38□□□□□ -1.07
RPP0YLR340W PAN1P32521 1480 aa8.35□□□□□ -1.07
RPP0YLR340W RQC2Q12532 1038 aaKnown RBP8.34□□□□□ -1.07
RPP0YLR340W GEA2P39993 1459 aaKnown RBP8.32□□□□□ -1.08
RPP0YLR340W ITT1Q04638 464 aa8.31□□□□□ -1.08
RPP0YLR340W YFR006WP43590 535 aa8.3□□□□□ -1.08
RPP0YLR340W ABP1P15891 592 aaKnown RBP8.28□□□□□ -1.08
RPP0YLR340W TY1B-HO13535 1793 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-DR5P0C2I2 1755 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-DR6P0C2I3 1755 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-LR2P0C2I5 1755 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-LR3P0C2I6 1755 aaKnown RBP8.27□□□□□ -1.09
RPP0YLR340W TY1B-PR1P0C2I9 1755 aaKnown RBP8.27□□□□□ -1.09
RPP0YLR340W TY1B-PR2P0C2J0 1756 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-PR3P0C2J1 1755 aaKnown RBP8.27□□□□□ -1.09
RPP0YLR340W TY1B-JR1P47098 1755 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-ML2Q03434 1755 aaKnown RBP8.27□□□□□ -1.09
RPP0YLR340W TY1B-ER1Q03612 1755 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-ML1Q04711 1755 aaKnown RBP8.27□□□□□ -1.09
RPP0YLR340W TY1B-GR2Q12269 1755 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-OLQ12273 1755 aa8.27□□□□□ -1.09
RPP0YLR340W TY1B-PLQ12414 1755 aaKnown RBP8.27□□□□□ -1.09
RPP0YLR340W TY2B-BQ12491 1770 aa8.26□□□□□ -1.09
RPP0YLR340W TOP2P06786 1428 aaKnown RBP8.24□□□□□ -1.09
RPP0YLR340W MMS1Q06211 1407 aa8.24□□□□□ -1.09
RPP0YLR340W MMS22Q06164 1454 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms