RNA–Protein interactions for RNA: YLR339C

YLR339C, Transcript of Dubious open reading frame, yeastyeast

Gene YLR339C, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR339CYLR339C MTC1P47018 478 aaKnown RBP13.92□□□□□ -0.18
YLR339CYLR339C DRS1P32892 752 aaKnown RBP13.78□□□□□ -0.2
YLR339CYLR339C FAP1P53971 965 aa11.82□□□□□ -0.52
YLR339CYLR339C BFR2Q06631 534 aaKnown RBP11.82□□□□□ -0.52
YLR339CYLR339C DIP2Q12220 943 aaPredicted RBP11.81□□□□□ -0.52
YLR339CYLR339C AVT3P36062 692 aa11.52□□□□□ -0.57
YLR339CYLR339C ISW2Q08773 1120 aa11.44□□□□□ -0.58
YLR339CYLR339C PRI1P10363 409 aa11.31□□□□□ -0.6
YLR339CYLR339C RPG1P38249 964 aaKnown RBP11.27□□□□□ -0.61
YLR339CYLR339C RSE1Q04693 1361 aaKnown RBP11.22□□□□□ -0.61
YLR339CYLR339C AAD16Q02895 342 aa11.19□□□□□ -0.62
YLR339CYLR339C PRY3P47033 881 aa11.05□□□□□ -0.64
YLR339CYLR339C TFA1P36100 482 aa10.87□□□□□ -0.67
YLR339CYLR339C RPL17AP05740 184 aaKnown RBP10.81□□□□□ -0.68
YLR339CYLR339C RPL17BP46990 184 aaKnown RBP10.81□□□□□ -0.68
YLR339CYLR339C TSR3Q12094 313 aaKnown RBP10.77□□□□□ -0.69
YLR339CYLR339C REB1P21538 810 aa10.75□□□□□ -0.69
YLR339CYLR339C MRPL32P25348 183 aa10.38□□□□□ -0.75
YLR339CYLR339C HAA1Q12753 694 aaKnown RBP10.38□□□□□ -0.75
YLR339CYLR339C SPT21P35209 758 aa10.31□□□□□ -0.76
YLR339CYLR339C YCK3P39962 524 aa10.28□□□□□ -0.76
YLR339CYLR339C RIM101P33400 625 aa10.13□□□□□ -0.79
YLR339CYLR339C YKR023WP36119 530 aaKnown RBP10.05□□□□□ -0.8
YLR339CYLR339C CDC27P38042 758 aa9.91□□□□□ -0.82
YLR339CYLR339C HOP09932 586 aa9.9□□□□□ -0.82
YLR339CYLR339C TFC8Q12308 588 aa9.87□□□□□ -0.83
YLR339CYLR339C DCD1P06773 312 aa9.84□□□□□ -0.83
YLR339CYLR339C OXP1P28273 1286 aa9.8□□□□□ -0.84
YLR339CYLR339C YIL055CP40523 627 aaKnown RBP9.79□□□□□ -0.84
YLR339CYLR339C PTP3P40048 928 aa9.75□□□□□ -0.85
YLR339CYLR339C YGL015CP33199 130 aa9.73□□□□□ -0.85
YLR339CYLR339C YAH1Q12184 172 aaKnown RBP9.73□□□□□ -0.85
YLR339CYLR339C SSP1P38871 571 aa9.61□□□□□ -0.87
YLR339CYLR339C BCH2P36122 765 aa9.58□□□□□ -0.88
YLR339CYLR339C RSM7P47150 247 aa9.57□□□□□ -0.88
YLR339CYLR339C UBP10P53874 792 aaPredicted RBP9.56□□□□□ -0.88
YLR339CYLR339C MAP2P38174 421 aaKnown RBP9.55□□□□□ -0.88
YLR339CYLR339C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
YLR339CYLR339C SCY1P53009 804 aa9.52□□□□□ -0.89
YLR339CYLR339C YLR271WQ06152 274 aa9.52□□□□□ -0.89
YLR339CYLR339C BBC1P47068 1157 aa9.44□□□□□ -0.9
YLR339CYLR339C AI2P03876 854 aa9.43□□□□□ -0.9
YLR339CYLR339C EPS1P40557 701 aa9.41□□□□□ -0.9
YLR339CYLR339C SLX5P32828 619 aaKnown RBP9.36□□□□□ -0.91
YLR339CYLR339C BDF1P35817 686 aa9.34□□□□□ -0.91
YLR339CYLR339C MGA2P40578 1113 aa9.3□□□□□ -0.92
YLR339CYLR339C PSD2P53037 1138 aaKnown RBP9.28□□□□□ -0.92
YLR339CYLR339C TIF4632P39936 914 aaKnown RBP9.23□□□□□ -0.93
YLR339CYLR339C CST9Q06032 482 aa9.22□□□□□ -0.93
YLR339CYLR339C MRM1P25270 412 aa9.14□□□□□ -0.95
YLR339CYLR339C TGL3P40308 642 aa9.11□□□□□ -0.95
YLR339CYLR339C RQC2Q12532 1038 aaKnown RBP9.05□□□□□ -0.96
YLR339CYLR339C RTG3P38165 486 aa8.99□□□□□ -0.97
YLR339CYLR339C RCR1P38212 213 aa8.92□□□□□ -0.98
YLR339CYLR339C YAP5P40574 245 aa8.91□□□□□ -0.98
YLR339CYLR339C DMA1P38823 416 aa8.9□□□□□ -0.98
YLR339CYLR339C NSR1P27476 414 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
YLR339CYLR339C YOR238WQ08634 303 aa8.87□□□□□ -0.99
YLR339CYLR339C VPS29P38759 282 aa8.86□□□□□ -0.99
YLR339CYLR339C YMR1P47147 688 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
YLR339CYLR339C RAM2P29703 316 aa8.83□□□□□ -1
YLR339CYLR339C PIB1Q06651 286 aa8.82□□□□□ -1
YLR339CYLR339C DBP1P24784 617 aaKnown RBP8.8□□□□□ -1
YLR339CYLR339C YFR006WP43590 535 aa8.8□□□□□ -1
YLR339CYLR339C MST1P07236 462 aa8.76□□□□□ -1.01
YLR339CYLR339C STS1P38637 319 aa8.76□□□□□ -1.01
YLR339CYLR339C MAK11P20484 414 aaKnown RBP8.75□□□□□ -1.01
YLR339CYLR339C GTT3P39996 337 aa8.74□□□□□ -1.01
YLR339CYLR339C MIF2P35201 549 aa8.68□□□□□ -1.02
YLR339CYLR339C UBP9P39967 754 aa8.68□□□□□ -1.02
YLR339CYLR339C VMA1P17255 1071 aaKnown RBP8.63□□□□□ -1.03
YLR339CYLR339C COQ8P27697 501 aa8.63□□□□□ -1.03
YLR339CYLR339C SET1P38827 1080 aaKnown RBP8.63□□□□□ -1.03
YLR339CYLR339C WSC3Q12215 556 aa8.62□□□□□ -1.03
YLR339CYLR339C YBL029C-AQ3E756 94 aa8.59□□□□□ -1.03
YLR339CYLR339C BUD31P25337 157 aaPredicted RBP8.58□□□□□ -1.04
YLR339CYLR339C EDS1P38073 919 aa8.55□□□□□ -1.04
YLR339CYLR339C PTC3P34221 468 aaKnown RBP8.52□□□□□ -1.05
YLR339CYLR339C SET4P42948 560 aa8.52□□□□□ -1.05
YLR339CYLR339C SAM3Q08986 587 aa8.52□□□□□ -1.05
YLR339CYLR339C YOL036WQ08206 761 aa8.51□□□□□ -1.05
YLR339CYLR339C NOP53Q12080 455 aaKnown RBP8.51□□□□□ -1.05
YLR339CYLR339C VNX1P42839 908 aa8.5□□□□□ -1.05
YLR339CYLR339C GRE2Q12068 342 aaKnown RBP8.5□□□□□ -1.05
YLR339CYLR339C GYP5Q12344 894 aa8.5□□□□□ -1.05
YLR339CYLR339C IFH1P39520 1085 aa8.49□□□□□ -1.05
YLR339CYLR339C SPP1Q03012 353 aa8.49□□□□□ -1.05
YLR339CYLR339C ATH1P48016 1211 aa8.48□□□□□ -1.05
YLR339CYLR339C MSB4Q12317 492 aa8.48□□□□□ -1.05
YLR339CYLR339C EAP1P36041 632 aaKnown RBP8.44□□□□□ -1.06
YLR339CYLR339C ABP1P15891 592 aaKnown RBP8.43□□□□□ -1.06
YLR339CYLR339C GUT1P32190 709 aa8.43□□□□□ -1.06
YLR339CYLR339C DCW1P36091 449 aa8.43□□□□□ -1.06
YLR339CYLR339C TIF11P38912 153 aaKnown RBP8.43□□□□□ -1.06
YLR339CYLR339C VPS70P47161 811 aa8.43□□□□□ -1.06
YLR339CYLR339C SAS10Q12136 610 aaPredicted RBP8.43□□□□□ -1.06
YLR339CYLR339C ULI1P43604 169 aa8.41□□□□□ -1.06
YLR339CYLR339C YPR148CQ06523 435 aa8.4□□□□□ -1.06
YLR339CYLR339C HTA1P04911 132 aaKnown RBP8.39□□□□□ -1.07
YLR339CYLR339C HTA2P04912 132 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms