RNA–Protein interactions for RNA: YLR291C

GCD7, Transcript of Beta subunit of the translation initiation factor eIF2B, yeastyeast

Gene GCD7, Length 1,146 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCD7YLR291C MTC1P47018 478 aaKnown RBP14.04□□□□□ -0.16
GCD7YLR291C DRS1P32892 752 aaKnown RBP13.56□□□□□ -0.24
GCD7YLR291C FAP1P53971 965 aa13.43□□□□□ -0.26
GCD7YLR291C PRY3P47033 881 aa12.66□□□□□ -0.38
GCD7YLR291C AAD16Q02895 342 aa12□□□□□ -0.49
GCD7YLR291C HAA1Q12753 694 aaKnown RBP11.91□□□□□ -0.5
GCD7YLR291C PRI1P10363 409 aa11.87□□□□□ -0.51
GCD7YLR291C YCK3P39962 524 aa11.87□□□□□ -0.51
GCD7YLR291C DIP2Q12220 943 aaPredicted RBP11.72□□□□□ -0.53
GCD7YLR291C ISW2Q08773 1120 aa11.54□□□□□ -0.56
GCD7YLR291C BFR2Q06631 534 aaKnown RBP11.51□□□□□ -0.57
GCD7YLR291C AVT3P36062 692 aa11.44□□□□□ -0.58
GCD7YLR291C RPG1P38249 964 aaKnown RBP11.37□□□□□ -0.59
GCD7YLR291C RSE1Q04693 1361 aaKnown RBP11.21□□□□□ -0.61
GCD7YLR291C TSR3Q12094 313 aaKnown RBP11.04□□□□□ -0.64
GCD7YLR291C RPL17AP05740 184 aaKnown RBP10.81□□□□□ -0.68
GCD7YLR291C RPL17BP46990 184 aaKnown RBP10.81□□□□□ -0.68
GCD7YLR291C YGL015CP33199 130 aa10.76□□□□□ -0.69
GCD7YLR291C REB1P21538 810 aa10.73□□□□□ -0.69
GCD7YLR291C MRPL32P25348 183 aa10.72□□□□□ -0.69
GCD7YLR291C BUD31P25337 157 aaPredicted RBP10.53□□□□□ -0.72
GCD7YLR291C TFA1P36100 482 aa10.49□□□□□ -0.73
GCD7YLR291C SPT21P35209 758 aa10.39□□□□□ -0.75
GCD7YLR291C YKR023WP36119 530 aaKnown RBP10.15□□□□□ -0.78
GCD7YLR291C RIM101P33400 625 aa10.14□□□□□ -0.79
GCD7YLR291C CDC27P38042 758 aa10.05□□□□□ -0.8
GCD7YLR291C TFC8Q12308 588 aa9.96□□□□□ -0.82
GCD7YLR291C HOP09932 586 aa9.92□□□□□ -0.82
GCD7YLR291C UBP10P53874 792 aaPredicted RBP9.88□□□□□ -0.83
GCD7YLR291C SIS1P25294 352 aaKnown RBP9.86□□□□□ -0.83
GCD7YLR291C DCD1P06773 312 aa9.84□□□□□ -0.83
GCD7YLR291C OXP1P28273 1286 aa9.79□□□□□ -0.84
GCD7YLR291C MAP2P38174 421 aaKnown RBP9.71□□□□□ -0.86
GCD7YLR291C UBP9P39967 754 aa9.69□□□□□ -0.86
GCD7YLR291C YIL055CP40523 627 aaKnown RBP9.67□□□□□ -0.86
GCD7YLR291C BCH2P36122 765 aa9.64□□□□□ -0.87
GCD7YLR291C PTP3P40048 928 aa9.63□□□□□ -0.87
GCD7YLR291C SCY1P53009 804 aa9.58□□□□□ -0.88
GCD7YLR291C YAH1Q12184 172 aaKnown RBP9.55□□□□□ -0.88
GCD7YLR291C RSM7P47150 247 aa9.52□□□□□ -0.89
GCD7YLR291C TIF4632P39936 914 aaKnown RBP9.49□□□□□ -0.89
GCD7YLR291C TGL3P40308 642 aa9.48□□□□□ -0.89
GCD7YLR291C SLX5P32828 619 aaKnown RBP9.47□□□□□ -0.89
GCD7YLR291C SSP1P38871 571 aa9.46□□□□□ -0.9
GCD7YLR291C EPS1P40557 701 aa9.44□□□□□ -0.9
GCD7YLR291C YLR271WQ06152 274 aa9.44□□□□□ -0.9
GCD7YLR291C AI2P03876 854 aa9.39□□□□□ -0.91
GCD7YLR291C BDF1P35817 686 aa9.39□□□□□ -0.91
GCD7YLR291C BBC1P47068 1157 aa9.39□□□□□ -0.91
GCD7YLR291C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
GCD7YLR291C PSD2P53037 1138 aaKnown RBP9.26□□□□□ -0.93
GCD7YLR291C MGA2P40578 1113 aa9.19□□□□□ -0.94
GCD7YLR291C CST9Q06032 482 aa9.11□□□□□ -0.95
GCD7YLR291C NSR1P27476 414 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95 RIP-Chip
GCD7YLR291C MRM1P25270 412 aa9.07□□□□□ -0.96
GCD7YLR291C YAP5P40574 245 aa8.99□□□□□ -0.97
GCD7YLR291C RQC2Q12532 1038 aaKnown RBP8.99□□□□□ -0.97
GCD7YLR291C YOR238WQ08634 303 aa8.98□□□□□ -0.97
GCD7YLR291C MST1P07236 462 aa8.97□□□□□ -0.97
GCD7YLR291C RTG3P38165 486 aa8.94□□□□□ -0.98
GCD7YLR291C YBL029C-AQ3E756 94 aa8.89□□□□□ -0.99
GCD7YLR291C VPS29P38759 282 aa8.87□□□□□ -0.99
GCD7YLR291C YMR1P47147 688 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
GCD7YLR291C RCR1P38212 213 aa8.84□□□□□ -0.99
GCD7YLR291C VNX1P42839 908 aa8.79□□□□□ -1
GCD7YLR291C DBP1P24784 617 aaKnown RBP8.78□□□□□ -1
GCD7YLR291C GTT3P39996 337 aa8.77□□□□□ -1.01
GCD7YLR291C PIB1Q06651 286 aa8.77□□□□□ -1.01
GCD7YLR291C STS1P38637 319 aa8.75□□□□□ -1.01
GCD7YLR291C YJL171CP46992 396 aa8.75□□□□□ -1.01
GCD7YLR291C RAM2P29703 316 aa8.73□□□□□ -1.01
GCD7YLR291C YFR006WP43590 535 aa8.72□□□□□ -1.01
GCD7YLR291C SPP1Q03012 353 aa8.7□□□□□ -1.02
GCD7YLR291C AIR2Q12476 344 aaKnown RBP8.7□□□□□ -1.02
GCD7YLR291C MAK11P20484 414 aaKnown RBP8.68□□□□□ -1.02
GCD7YLR291C VMA1P17255 1071 aaKnown RBP8.66□□□□□ -1.02
GCD7YLR291C WSC3Q12215 556 aa8.65□□□□□ -1.02
GCD7YLR291C FKH1P40466 484 aa8.63□□□□□ -1.03
GCD7YLR291C SAM3Q08986 587 aa8.61□□□□□ -1.03
GCD7YLR291C MSB4Q12317 492 aa8.61□□□□□ -1.03
GCD7YLR291C YOL036WQ08206 761 aa8.58□□□□□ -1.04
GCD7YLR291C TIF11P38912 153 aaKnown RBP8.57□□□□□ -1.04
GCD7YLR291C COQ8P27697 501 aa8.54□□□□□ -1.04
GCD7YLR291C MIF2P35201 549 aa8.54□□□□□ -1.04
GCD7YLR291C EAP1P36041 632 aaKnown RBP8.53□□□□□ -1.04
GCD7YLR291C SET4P42948 560 aa8.53□□□□□ -1.04
GCD7YLR291C ABP1P15891 592 aaKnown RBP8.52□□□□□ -1.05
GCD7YLR291C EDS1P38073 919 aa8.51□□□□□ -1.05
GCD7YLR291C ULI1P43604 169 aa8.5□□□□□ -1.05
GCD7YLR291C NOP53Q12080 455 aaKnown RBP8.5□□□□□ -1.05
GCD7YLR291C GYP5Q12344 894 aa8.5□□□□□ -1.05
GCD7YLR291C BMT6Q12291 365 aa8.49□□□□□ -1.05
GCD7YLR291C PTC3P34221 468 aaKnown RBP8.48□□□□□ -1.05
GCD7YLR291C IOC2Q12072 812 aa8.46□□□□□ -1.06
GCD7YLR291C GRE2Q12068 342 aaKnown RBP8.45□□□□□ -1.06
GCD7YLR291C TRP5P00931 707 aaKnown RBP8.43□□□□□ -1.06
GCD7YLR291C SET1P38827 1080 aaKnown RBP8.43□□□□□ -1.06
GCD7YLR291C LDB19Q12502 818 aa8.42□□□□□ -1.06
GCD7YLR291C HTA1P04911 132 aaKnown RBP8.41□□□□□ -1.06
GCD7YLR291C HTA2P04912 132 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms