RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeastyeast

Gene GPN3, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPN3YLR243W MTC1P47018 478 aaKnown RBP14.7□□□□□ -0.06
GPN3YLR243W DRS1P32892 752 aaKnown RBP14.48□□□□□ -0.09
GPN3YLR243W FAP1P53971 965 aa12.64□□□□□ -0.39
GPN3YLR243W DIP2Q12220 943 aaPredicted RBP12.42□□□□□ -0.42
GPN3YLR243W BFR2Q06631 534 aaKnown RBP12.38□□□□□ -0.43
GPN3YLR243W AVT3P36062 692 aa12.22□□□□□ -0.45
GPN3YLR243W PRI1P10363 409 aa12.05□□□□□ -0.48
GPN3YLR243W ISW2Q08773 1120 aa11.99□□□□□ -0.49
GPN3YLR243W AAD16Q02895 342 aa11.93□□□□□ -0.5
GPN3YLR243W RPG1P38249 964 aaKnown RBP11.87□□□□□ -0.51
GPN3YLR243W PRY3P47033 881 aa11.85□□□□□ -0.51
GPN3YLR243W RSE1Q04693 1361 aaKnown RBP11.77□□□□□ -0.53
GPN3YLR243W TFA1P36100 482 aa11.45□□□□□ -0.58
GPN3YLR243W TSR3Q12094 313 aaKnown RBP11.4□□□□□ -0.58
GPN3YLR243W RPL17AP05740 184 aaKnown RBP11.38□□□□□ -0.59
GPN3YLR243W RPL17BP46990 184 aaKnown RBP11.38□□□□□ -0.59
GPN3YLR243W REB1P21538 810 aa11.21□□□□□ -0.61
GPN3YLR243W HAA1Q12753 694 aaKnown RBP11.2□□□□□ -0.62
GPN3YLR243W YCK3P39962 524 aa11.19□□□□□ -0.62
GPN3YLR243W SPT21P35209 758 aa11□□□□□ -0.65
GPN3YLR243W MRPL32P25348 183 aa10.96□□□□□ -0.65
GPN3YLR243W RIM101P33400 625 aa10.74□□□□□ -0.69
GPN3YLR243W YKR023WP36119 530 aaKnown RBP10.71□□□□□ -0.69
GPN3YLR243W CDC27P38042 758 aa10.57□□□□□ -0.72
GPN3YLR243W HOP09932 586 aa10.49□□□□□ -0.73
GPN3YLR243W DCD1P06773 312 aa10.46□□□□□ -0.73
GPN3YLR243W OXP1P28273 1286 aa10.45□□□□□ -0.74
GPN3YLR243W TFC8Q12308 588 aa10.45□□□□□ -0.74
GPN3YLR243W YGL015CP33199 130 aa10.42□□□□□ -0.74
GPN3YLR243W YAH1Q12184 172 aaKnown RBP10.22□□□□□ -0.77
GPN3YLR243W PTP3P40048 928 aa10.21□□□□□ -0.77
GPN3YLR243W UBP10P53874 792 aaPredicted RBP10.18□□□□□ -0.78
GPN3YLR243W YIL055CP40523 627 aaKnown RBP10.16□□□□□ -0.78
GPN3YLR243W BCH2P36122 765 aa10.15□□□□□ -0.78
GPN3YLR243W MAP2P38174 421 aaKnown RBP10.12□□□□□ -0.79
GPN3YLR243W SSP1P38871 571 aa10.09□□□□□ -0.79
GPN3YLR243W YLR271WQ06152 274 aa10.09□□□□□ -0.79
GPN3YLR243W RSM7P47150 247 aa10.06□□□□□ -0.8
GPN3YLR243W SCY1P53009 804 aa10.04□□□□□ -0.8
GPN3YLR243W EPS1P40557 701 aa9.95□□□□□ -0.82
GPN3YLR243W AI2P03876 854 aa9.94□□□□□ -0.82
GPN3YLR243W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.9□□□□□ -0.82not detected
GPN3YLR243W BDF1P35817 686 aa9.88□□□□□ -0.83
GPN3YLR243W PSD2P53037 1138 aaKnown RBP9.85□□□□□ -0.83
GPN3YLR243W SLX5P32828 619 aaKnown RBP9.84□□□□□ -0.83
GPN3YLR243W BBC1P47068 1157 aa9.81□□□□□ -0.84
GPN3YLR243W CST9Q06032 482 aa9.8□□□□□ -0.84
GPN3YLR243W TIF4632P39936 914 aaKnown RBP9.76□□□□□ -0.85
GPN3YLR243W MGA2P40578 1113 aa9.76□□□□□ -0.85
GPN3YLR243W TGL3P40308 642 aa9.7□□□□□ -0.86
GPN3YLR243W MRM1P25270 412 aa9.63□□□□□ -0.87
GPN3YLR243W RCR1P38212 213 aa9.52□□□□□ -0.89
GPN3YLR243W NSR1P27476 414 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
GPN3YLR243W RTG3P38165 486 aa9.42□□□□□ -0.9
GPN3YLR243W VPS29P38759 282 aa9.41□□□□□ -0.9
GPN3YLR243W BUD31P25337 157 aaPredicted RBP9.4□□□□□ -0.9
GPN3YLR243W RAM2P29703 316 aa9.38□□□□□ -0.91
GPN3YLR243W MST1P07236 462 aa9.34□□□□□ -0.91
GPN3YLR243W DMA1P38823 416 aa9.34□□□□□ -0.91
GPN3YLR243W YOR238WQ08634 303 aa9.33□□□□□ -0.92
GPN3YLR243W YAP5P40574 245 aa9.32□□□□□ -0.92
GPN3YLR243W STS1P38637 319 aa9.31□□□□□ -0.92
GPN3YLR243W PIB1Q06651 286 aa9.31□□□□□ -0.92
GPN3YLR243W UBP9P39967 754 aa9.3□□□□□ -0.92
GPN3YLR243W YFR006WP43590 535 aa9.29□□□□□ -0.92
GPN3YLR243W YMR1P47147 688 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92 RIP-Chip
GPN3YLR243W DBP1P24784 617 aaKnown RBP9.26□□□□□ -0.93
GPN3YLR243W MAK11P20484 414 aaKnown RBP9.19□□□□□ -0.94
GPN3YLR243W RQC2Q12532 1038 aaKnown RBP9.16□□□□□ -0.94
GPN3YLR243W VMA1P17255 1071 aaKnown RBP9.11□□□□□ -0.95
GPN3YLR243W EDS1P38073 919 aa9.1□□□□□ -0.95
GPN3YLR243W COQ8P27697 501 aa9.09□□□□□ -0.95
GPN3YLR243W GTT3P39996 337 aa9.09□□□□□ -0.95
GPN3YLR243W YBL029C-AQ3E756 94 aa9.08□□□□□ -0.96
GPN3YLR243W MIF2P35201 549 aa9.06□□□□□ -0.96
GPN3YLR243W SET1P38827 1080 aaKnown RBP9.04□□□□□ -0.96
GPN3YLR243W WSC3Q12215 556 aa9.04□□□□□ -0.96
GPN3YLR243W VNX1P42839 908 aa9.03□□□□□ -0.96
GPN3YLR243W SAM3Q08986 587 aa9□□□□□ -0.97
GPN3YLR243W PTC3P34221 468 aaKnown RBP8.98□□□□□ -0.97
GPN3YLR243W YOL036WQ08206 761 aa8.98□□□□□ -0.97
GPN3YLR243W SIS1P25294 352 aaKnown RBP8.97□□□□□ -0.97
GPN3YLR243W SET4P42948 560 aa8.95□□□□□ -0.98
GPN3YLR243W SPP1Q03012 353 aa8.95□□□□□ -0.98
GPN3YLR243W MSB4Q12317 492 aa8.93□□□□□ -0.98
GPN3YLR243W TIF11P38912 153 aaKnown RBP8.92□□□□□ -0.98
GPN3YLR243W SAS10Q12136 610 aaPredicted RBP8.91□□□□□ -0.98
GPN3YLR243W GYP5Q12344 894 aa8.9□□□□□ -0.98
GPN3YLR243W YPR148CQ06523 435 aa8.89□□□□□ -0.99
GPN3YLR243W GRE2Q12068 342 aaKnown RBP8.88□□□□□ -0.99
GPN3YLR243W NOP53Q12080 455 aaKnown RBP8.88□□□□□ -0.99
GPN3YLR243W EAP1P36041 632 aaKnown RBP8.85□□□□□ -0.99
GPN3YLR243W DCW1P36091 449 aa8.84□□□□□ -0.99
GPN3YLR243W ATH1P48016 1211 aa8.84□□□□□ -0.99
GPN3YLR243W ULI1P43604 169 aa8.83□□□□□ -1
GPN3YLR243W VPS70P47161 811 aa8.83□□□□□ -1
GPN3YLR243W GUT1P32190 709 aa8.82□□□□□ -1
GPN3YLR243W SOL3P38858 249 aa8.81□□□□□ -1
GPN3YLR243W TRP5P00931 707 aaKnown RBP8.8□□□□□ -1
GPN3YLR243W ABP1P15891 592 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms