RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W MTC1P47018 478 aaKnown RBP11.73□□□□□ -0.53
NOP56YLR197W DRS1P32892 752 aaKnown RBP11.65□□□□□ -0.55
NOP56YLR197W BFR2Q06631 534 aaKnown RBP10.02□□□□□ -0.81
NOP56YLR197W DIP2Q12220 943 aaPredicted RBP9.97□□□□□ -0.81
NOP56YLR197W AVT3P36062 692 aa9.81□□□□□ -0.84
NOP56YLR197W FAP1P53971 965 aa9.79□□□□□ -0.84
NOP56YLR197W ISW2Q08773 1120 aa9.57□□□□□ -0.88
NOP56YLR197W PRI1P10363 409 aa9.51□□□□□ -0.89
NOP56YLR197W RPG1P38249 964 aaKnown RBP9.47□□□□□ -0.89
NOP56YLR197W RSE1Q04693 1361 aaKnown RBP9.44□□□□□ -0.9
NOP56YLR197W AAD16Q02895 342 aa9.36□□□□□ -0.91
NOP56YLR197W TFA1P36100 482 aa9.34□□□□□ -0.91
NOP56YLR197W PRY3P47033 881 aa9.15□□□□□ -0.94
NOP56YLR197W RPL17AP05740 184 aaKnown RBP9.1□□□□□ -0.95
NOP56YLR197W RPL17BP46990 184 aaKnown RBP9.1□□□□□ -0.95
NOP56YLR197W TSR3Q12094 313 aaKnown RBP9.03□□□□□ -0.96
NOP56YLR197W REB1P21538 810 aa8.99□□□□□ -0.97
NOP56YLR197W SPT21P35209 758 aa8.75□□□□□ -1.01
NOP56YLR197W YCK3P39962 524 aa8.68□□□□□ -1.02
NOP56YLR197W MRPL32P25348 183 aa8.67□□□□□ -1.02
NOP56YLR197W HAA1Q12753 694 aaKnown RBP8.64□□□□□ -1.03
NOP56YLR197W RIM101P33400 625 aa8.61□□□□□ -1.03
NOP56YLR197W YKR023WP36119 530 aaKnown RBP8.51□□□□□ -1.05
NOP56YLR197W CDC27P38042 758 aa8.36□□□□□ -1.07
NOP56YLR197W OXP1P28273 1286 aa8.35□□□□□ -1.07
NOP56YLR197W HOP09932 586 aa8.34□□□□□ -1.08
NOP56YLR197W TFC8Q12308 588 aa8.34□□□□□ -1.08
NOP56YLR197W DCD1P06773 312 aa8.28□□□□□ -1.08
NOP56YLR197W YIL055CP40523 627 aaKnown RBP8.24□□□□□ -1.09
NOP56YLR197W PTP3P40048 928 aa8.23□□□□□ -1.09
NOP56YLR197W YAH1Q12184 172 aaKnown RBP8.19□□□□□ -1.1
NOP56YLR197W SSP1P38871 571 aa8.17□□□□□ -1.1
NOP56YLR197W YGL015CP33199 130 aa8.13□□□□□ -1.11
NOP56YLR197W BCH2P36122 765 aa8.1□□□□□ -1.11
NOP56YLR197W RSM7P47150 247 aa8.1□□□□□ -1.11
NOP56YLR197W YLR271WQ06152 274 aa8.09□□□□□ -1.11
NOP56YLR197W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
NOP56YLR197W MAP2P38174 421 aaKnown RBP8.02□□□□□ -1.13
NOP56YLR197W UBP10P53874 792 aaPredicted RBP8.01□□□□□ -1.13
NOP56YLR197W SCY1P53009 804 aa7.98□□□□□ -1.13
NOP56YLR197W AI2P03876 854 aa7.97□□□□□ -1.13
NOP56YLR197W EPS1P40557 701 aa7.93□□□□□ -1.14
NOP56YLR197W BBC1P47068 1157 aa7.92□□□□□ -1.14
NOP56YLR197W BDF1P35817 686 aa7.89□□□□□ -1.15
NOP56YLR197W MGA2P40578 1113 aa7.89□□□□□ -1.15
NOP56YLR197W PSD2P53037 1138 aaKnown RBP7.88□□□□□ -1.15
NOP56YLR197W CST9Q06032 482 aa7.84□□□□□ -1.15
NOP56YLR197W SLX5P32828 619 aaKnown RBP7.83□□□□□ -1.16
NOP56YLR197W RQC2Q12532 1038 aaKnown RBP7.73□□□□□ -1.17
NOP56YLR197W MRM1P25270 412 aa7.72□□□□□ -1.17
NOP56YLR197W TIF4632P39936 914 aaKnown RBP7.7□□□□□ -1.18
NOP56YLR197W TGL3P40308 642 aa7.66□□□□□ -1.18
NOP56YLR197W DMA1P38823 416 aa7.64□□□□□ -1.19
NOP56YLR197W RTG3P38165 486 aa7.61□□□□□ -1.19
NOP56YLR197W RCR1P38212 213 aa7.58□□□□□ -1.2
NOP56YLR197W VPS29P38759 282 aa7.54□□□□□ -1.2
NOP56YLR197W RAM2P29703 316 aa7.53□□□□□ -1.2
NOP56YLR197W NSR1P27476 414 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
NOP56YLR197W YMR1P47147 688 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
NOP56YLR197W YAP5P40574 245 aa7.47□□□□□ -1.21
NOP56YLR197W BUD31P25337 157 aaPredicted RBP7.45□□□□□ -1.22
NOP56YLR197W YOR238WQ08634 303 aa7.45□□□□□ -1.22
NOP56YLR197W MAK11P20484 414 aaKnown RBP7.43□□□□□ -1.22
NOP56YLR197W DBP1P24784 617 aaKnown RBP7.43□□□□□ -1.22
NOP56YLR197W STS1P38637 319 aa7.42□□□□□ -1.22
NOP56YLR197W MST1P07236 462 aa7.42□□□□□ -1.22
NOP56YLR197W YFR006WP43590 535 aa7.42□□□□□ -1.22
NOP56YLR197W PIB1Q06651 286 aa7.4□□□□□ -1.22
NOP56YLR197W SET1P38827 1080 aaKnown RBP7.35□□□□□ -1.23
NOP56YLR197W COQ8P27697 501 aa7.32□□□□□ -1.24
NOP56YLR197W MIF2P35201 549 aa7.32□□□□□ -1.24
NOP56YLR197W VMA1P17255 1071 aaKnown RBP7.29□□□□□ -1.24
NOP56YLR197W EDS1P38073 919 aa7.28□□□□□ -1.24
NOP56YLR197W SAS10Q12136 610 aaPredicted RBP7.28□□□□□ -1.24
NOP56YLR197W GTT3P39996 337 aa7.27□□□□□ -1.25
NOP56YLR197W NOP53Q12080 455 aaKnown RBP7.26□□□□□ -1.25
NOP56YLR197W PTC3P34221 468 aaKnown RBP7.23□□□□□ -1.25
NOP56YLR197W SAM3Q08986 587 aa7.23□□□□□ -1.25
NOP56YLR197W IFH1P39520 1085 aa7.22□□□□□ -1.25
NOP56YLR197W UBP9P39967 754 aa7.22□□□□□ -1.25
NOP56YLR197W YPR148CQ06523 435 aa7.2□□□□□ -1.26
NOP56YLR197W WSC3Q12215 556 aa7.19□□□□□ -1.26
NOP56YLR197W VPS70P47161 811 aa7.17□□□□□ -1.26
NOP56YLR197W YBL029C-AQ3E756 94 aa7.17□□□□□ -1.26
NOP56YLR197W YOL036WQ08206 761 aa7.17□□□□□ -1.26
NOP56YLR197W GYP5Q12344 894 aa7.17□□□□□ -1.26
NOP56YLR197W GRE2Q12068 342 aaKnown RBP7.16□□□□□ -1.26
NOP56YLR197W VNX1P42839 908 aa7.15□□□□□ -1.27
NOP56YLR197W SET4P42948 560 aa7.15□□□□□ -1.27
NOP56YLR197W ATH1P48016 1211 aa7.14□□□□□ -1.27
NOP56YLR197W GUT1P32190 709 aa7.13□□□□□ -1.27
NOP56YLR197W MSB4Q12317 492 aa7.13□□□□□ -1.27
NOP56YLR197W CKB1P43639 278 aa7.11□□□□□ -1.27
NOP56YLR197W DCW1P36091 449 aa7.1□□□□□ -1.27
NOP56YLR197W ABP1P15891 592 aaKnown RBP7.09□□□□□ -1.27
NOP56YLR197W SPP1Q03012 353 aa7.08□□□□□ -1.28
NOP56YLR197W EAP1P36041 632 aaKnown RBP7.07□□□□□ -1.28
NOP56YLR197W TIF11P38912 153 aaKnown RBP7.07□□□□□ -1.28
NOP56YLR197W HTA1P04911 132 aaKnown RBP7.06□□□□□ -1.28
NOP56YLR197W HTA2P04912 132 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms