RNA–Protein interactions for RNA: YLR107W

REX3, Transcript of RNA exonuclease, yeastyeast

Gene REX3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
REX3YLR107W MTC1P47018 478 aaKnown RBP17.51■□□□□ 0.39
REX3YLR107W DRS1P32892 752 aaKnown RBP17.33■□□□□ 0.36
REX3YLR107W BFR2Q06631 534 aaKnown RBP14.89□□□□□ -0.03
REX3YLR107W DIP2Q12220 943 aaPredicted RBP14.83□□□□□ -0.04
REX3YLR107W AVT3P36062 692 aa14.6□□□□□ -0.07
REX3YLR107W FAP1P53971 965 aa14.54□□□□□ -0.08
REX3YLR107W ISW2Q08773 1120 aa14.27□□□□□ -0.13
REX3YLR107W PRI1P10363 409 aa14.18□□□□□ -0.14
REX3YLR107W RPG1P38249 964 aaKnown RBP14.07□□□□□ -0.16
REX3YLR107W RSE1Q04693 1361 aaKnown RBP14.06□□□□□ -0.16
REX3YLR107W AAD16Q02895 342 aa13.95□□□□□ -0.18
REX3YLR107W TFA1P36100 482 aa13.89□□□□□ -0.19
REX3YLR107W PRY3P47033 881 aa13.63□□□□□ -0.23
REX3YLR107W RPL17AP05740 184 aaKnown RBP13.54□□□□□ -0.24
REX3YLR107W RPL17BP46990 184 aaKnown RBP13.54□□□□□ -0.24
REX3YLR107W TSR3Q12094 313 aaKnown RBP13.43□□□□□ -0.26
REX3YLR107W REB1P21538 810 aa13.37□□□□□ -0.27
REX3YLR107W SPT21P35209 758 aa13.08□□□□□ -0.32
REX3YLR107W YCK3P39962 524 aa12.96□□□□□ -0.33
REX3YLR107W MRPL32P25348 183 aa12.9□□□□□ -0.34
REX3YLR107W HAA1Q12753 694 aaKnown RBP12.88□□□□□ -0.35
REX3YLR107W RIM101P33400 625 aa12.83□□□□□ -0.36
REX3YLR107W YKR023WP36119 530 aaKnown RBP12.68□□□□□ -0.38
REX3YLR107W CDC27P38042 758 aa12.46□□□□□ -0.41
REX3YLR107W OXP1P28273 1286 aa12.42□□□□□ -0.42
REX3YLR107W TFC8Q12308 588 aa12.42□□□□□ -0.42
REX3YLR107W HOP09932 586 aa12.39□□□□□ -0.43
REX3YLR107W DCD1P06773 312 aa12.29□□□□□ -0.44
REX3YLR107W PTP3P40048 928 aa12.2□□□□□ -0.46
REX3YLR107W YIL055CP40523 627 aaKnown RBP12.2□□□□□ -0.46
REX3YLR107W YAH1Q12184 172 aaKnown RBP12.16□□□□□ -0.46
REX3YLR107W SSP1P38871 571 aa12.15□□□□□ -0.46
REX3YLR107W YGL015CP33199 130 aa12.09□□□□□ -0.47
REX3YLR107W RSM7P47150 247 aa12.05□□□□□ -0.48
REX3YLR107W BCH2P36122 765 aa12.04□□□□□ -0.48
REX3YLR107W YLR271WQ06152 274 aa12.04□□□□□ -0.48
REX3YLR107W UBP10P53874 792 aaPredicted RBP12.01□□□□□ -0.49
REX3YLR107W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.97□□□□□ -0.49not detected
REX3YLR107W MAP2P38174 421 aaKnown RBP11.95□□□□□ -0.5
REX3YLR107W SCY1P53009 804 aa11.88□□□□□ -0.51
REX3YLR107W AI2P03876 854 aa11.85□□□□□ -0.51
REX3YLR107W EPS1P40557 701 aa11.82□□□□□ -0.52
REX3YLR107W BBC1P47068 1157 aa11.79□□□□□ -0.52
REX3YLR107W PSD2P53037 1138 aaKnown RBP11.77□□□□□ -0.53
REX3YLR107W MGA2P40578 1113 aa11.75□□□□□ -0.53
REX3YLR107W BDF1P35817 686 aa11.74□□□□□ -0.53
REX3YLR107W SLX5P32828 619 aaKnown RBP11.68□□□□□ -0.54
REX3YLR107W CST9Q06032 482 aa11.66□□□□□ -0.54
REX3YLR107W RQC2Q12532 1038 aaKnown RBP11.49□□□□□ -0.57
REX3YLR107W MRM1P25270 412 aa11.47□□□□□ -0.57
REX3YLR107W TIF4632P39936 914 aaKnown RBP11.47□□□□□ -0.57
REX3YLR107W TGL3P40308 642 aa11.41□□□□□ -0.58
REX3YLR107W RTG3P38165 486 aa11.31□□□□□ -0.6
REX3YLR107W DMA1P38823 416 aa11.31□□□□□ -0.6
REX3YLR107W RCR1P38212 213 aa11.29□□□□□ -0.6
REX3YLR107W NSR1P27476 414 aaKnown RBP RIP-Chip data11.27□□□□□ -0.61not detected
REX3YLR107W RAM2P29703 316 aa11.22□□□□□ -0.61
REX3YLR107W VPS29P38759 282 aa11.22□□□□□ -0.61
REX3YLR107W YAP5P40574 245 aa11.16□□□□□ -0.62
REX3YLR107W YMR1P47147 688 aaKnown RBP RIP-Chip data11.14□□□□□ -0.63not detected
REX3YLR107W YOR238WQ08634 303 aa11.11□□□□□ -0.63
REX3YLR107W MST1P07236 462 aa11.07□□□□□ -0.64
REX3YLR107W MAK11P20484 414 aaKnown RBP11.07□□□□□ -0.64
REX3YLR107W STS1P38637 319 aa11.07□□□□□ -0.64
REX3YLR107W DBP1P24784 617 aaKnown RBP11.06□□□□□ -0.64
REX3YLR107W YFR006WP43590 535 aa11.01□□□□□ -0.65
REX3YLR107W PIB1Q06651 286 aa10.98□□□□□ -0.65
REX3YLR107W COQ8P27697 501 aa10.91□□□□□ -0.66
REX3YLR107W SET1P38827 1080 aaKnown RBP10.91□□□□□ -0.66
REX3YLR107W VMA1P17255 1071 aaKnown RBP10.88□□□□□ -0.67
REX3YLR107W MIF2P35201 549 aa10.85□□□□□ -0.67
REX3YLR107W EDS1P38073 919 aa10.85□□□□□ -0.67
REX3YLR107W GTT3P39996 337 aa10.85□□□□□ -0.67
REX3YLR107W SAS10Q12136 610 aaPredicted RBP10.85□□□□□ -0.67
REX3YLR107W NOP53Q12080 455 aaKnown RBP10.82□□□□□ -0.68
REX3YLR107W SAM3Q08986 587 aa10.8□□□□□ -0.68
REX3YLR107W PTC3P34221 468 aaKnown RBP10.76□□□□□ -0.69
REX3YLR107W IFH1P39520 1085 aa10.76□□□□□ -0.69
REX3YLR107W YPR148CQ06523 435 aa10.76□□□□□ -0.69
REX3YLR107W UBP9P39967 754 aa10.73□□□□□ -0.69
REX3YLR107W YOL036WQ08206 761 aa10.7□□□□□ -0.7
REX3YLR107W YBL029C-AQ3E756 94 aa10.7□□□□□ -0.7
REX3YLR107W WSC3Q12215 556 aa10.69□□□□□ -0.7
REX3YLR107W GRE2Q12068 342 aaKnown RBP10.67□□□□□ -0.7
REX3YLR107W MSB4Q12317 492 aa10.67□□□□□ -0.7
REX3YLR107W GYP5Q12344 894 aa10.66□□□□□ -0.7
REX3YLR107W BUD31P25337 157 aaPredicted RBP10.65□□□□□ -0.7
REX3YLR107W VNX1P42839 908 aa10.65□□□□□ -0.7
REX3YLR107W SET4P42948 560 aa10.64□□□□□ -0.71
REX3YLR107W VPS70P47161 811 aa10.64□□□□□ -0.71
REX3YLR107W ATH1P48016 1211 aa10.63□□□□□ -0.71
REX3YLR107W ABP1P15891 592 aaKnown RBP10.62□□□□□ -0.71
REX3YLR107W GUT1P32190 709 aa10.62□□□□□ -0.71
REX3YLR107W CKB1P43639 278 aa10.57□□□□□ -0.72
REX3YLR107W EAP1P36041 632 aaKnown RBP10.55□□□□□ -0.72
REX3YLR107W TIF11P38912 153 aaKnown RBP10.55□□□□□ -0.72
REX3YLR107W DCW1P36091 449 aa10.54□□□□□ -0.72
REX3YLR107W SPP1Q03012 353 aa10.54□□□□□ -0.72
REX3YLR107W HTA1P04911 132 aaKnown RBP10.52□□□□□ -0.73
REX3YLR107W HTA2P04912 132 aa10.52□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms