RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C MTC1P47018 478 aaKnown RBP11.1□□□□□ -0.63
AFB1YLR040C DRS1P32892 752 aaKnown RBP10.84□□□□□ -0.67
AFB1YLR040C FAP1P53971 965 aa9.49□□□□□ -0.89
AFB1YLR040C DIP2Q12220 943 aaPredicted RBP9.35□□□□□ -0.91
AFB1YLR040C BFR2Q06631 534 aaKnown RBP9.22□□□□□ -0.93
AFB1YLR040C AVT3P36062 692 aa9.14□□□□□ -0.95
AFB1YLR040C PRI1P10363 409 aa9.11□□□□□ -0.95
AFB1YLR040C ISW2Q08773 1120 aa9.07□□□□□ -0.96
AFB1YLR040C PRY3P47033 881 aa9.02□□□□□ -0.97
AFB1YLR040C RPG1P38249 964 aaKnown RBP9.01□□□□□ -0.97
AFB1YLR040C AAD16Q02895 342 aa8.99□□□□□ -0.97
AFB1YLR040C RSE1Q04693 1361 aaKnown RBP8.87□□□□□ -0.99
AFB1YLR040C TSR3Q12094 313 aaKnown RBP8.66□□□□□ -1.02
AFB1YLR040C RPL17AP05740 184 aaKnown RBP8.59□□□□□ -1.03
AFB1YLR040C RPL17BP46990 184 aaKnown RBP8.59□□□□□ -1.03
AFB1YLR040C YCK3P39962 524 aa8.53□□□□□ -1.04
AFB1YLR040C REB1P21538 810 aa8.47□□□□□ -1.05
AFB1YLR040C TFA1P36100 482 aa8.47□□□□□ -1.05
AFB1YLR040C HAA1Q12753 694 aaKnown RBP8.34□□□□□ -1.07
AFB1YLR040C MRPL32P25348 183 aa8.28□□□□□ -1.08
AFB1YLR040C SPT21P35209 758 aa8.26□□□□□ -1.09
AFB1YLR040C YKR023WP36119 530 aaKnown RBP8.08□□□□□ -1.12
AFB1YLR040C RIM101P33400 625 aa8.07□□□□□ -1.12
AFB1YLR040C CDC27P38042 758 aa8□□□□□ -1.13
AFB1YLR040C HOP09932 586 aa7.92□□□□□ -1.14
AFB1YLR040C TFC8Q12308 588 aa7.9□□□□□ -1.14
AFB1YLR040C DCD1P06773 312 aa7.89□□□□□ -1.15
AFB1YLR040C OXP1P28273 1286 aa7.86□□□□□ -1.15
AFB1YLR040C YGL015CP33199 130 aa7.8□□□□□ -1.16
AFB1YLR040C YIL055CP40523 627 aaKnown RBP7.69□□□□□ -1.18
AFB1YLR040C BCH2P36122 765 aa7.68□□□□□ -1.18
AFB1YLR040C MAP2P38174 421 aaKnown RBP7.67□□□□□ -1.18
AFB1YLR040C YAH1Q12184 172 aaKnown RBP7.67□□□□□ -1.18
AFB1YLR040C PTP3P40048 928 aa7.65□□□□□ -1.18
AFB1YLR040C BUD31P25337 157 aaPredicted RBP7.63□□□□□ -1.19
AFB1YLR040C UBP10P53874 792 aaPredicted RBP7.62□□□□□ -1.19
AFB1YLR040C SCY1P53009 804 aa7.6□□□□□ -1.19
AFB1YLR040C RSM7P47150 247 aa7.58□□□□□ -1.2
AFB1YLR040C YLR271WQ06152 274 aa7.57□□□□□ -1.2
AFB1YLR040C SSP1P38871 571 aa7.56□□□□□ -1.2
AFB1YLR040C EPS1P40557 701 aa7.49□□□□□ -1.21
AFB1YLR040C AI2P03876 854 aa7.47□□□□□ -1.21
AFB1YLR040C BDF1P35817 686 aa7.46□□□□□ -1.22
AFB1YLR040C SLX5P32828 619 aaKnown RBP7.45□□□□□ -1.22
AFB1YLR040C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
AFB1YLR040C BBC1P47068 1157 aa7.41□□□□□ -1.22
AFB1YLR040C PSD2P53037 1138 aaKnown RBP7.38□□□□□ -1.23
AFB1YLR040C CST9Q06032 482 aa7.33□□□□□ -1.24
AFB1YLR040C MGA2P40578 1113 aa7.32□□□□□ -1.24
AFB1YLR040C TIF4632P39936 914 aaKnown RBP7.31□□□□□ -1.24
AFB1YLR040C TGL3P40308 642 aa7.3□□□□□ -1.24
AFB1YLR040C MRM1P25270 412 aa7.24□□□□□ -1.25
AFB1YLR040C RCR1P38212 213 aa7.12□□□□□ -1.27
AFB1YLR040C RTG3P38165 486 aa7.09□□□□□ -1.27
AFB1YLR040C VPS29P38759 282 aa7.09□□□□□ -1.27
AFB1YLR040C NSR1P27476 414 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
AFB1YLR040C MST1P07236 462 aa7.06□□□□□ -1.28
AFB1YLR040C YAP5P40574 245 aa7.06□□□□□ -1.28
AFB1YLR040C SIS1P25294 352 aaKnown RBP7.05□□□□□ -1.28
AFB1YLR040C YOR238WQ08634 303 aa7.05□□□□□ -1.28
AFB1YLR040C PIB1Q06651 286 aa7.02□□□□□ -1.29
AFB1YLR040C RAM2P29703 316 aa7.01□□□□□ -1.29
AFB1YLR040C YMR1P47147 688 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
AFB1YLR040C STS1P38637 319 aa6.99□□□□□ -1.29
AFB1YLR040C YFR006WP43590 535 aa6.99□□□□□ -1.29
AFB1YLR040C DBP1P24784 617 aaKnown RBP6.98□□□□□ -1.29
AFB1YLR040C UBP9P39967 754 aa6.9□□□□□ -1.3
AFB1YLR040C MAK11P20484 414 aaKnown RBP6.88□□□□□ -1.31
AFB1YLR040C DMA1P38823 416 aa6.88□□□□□ -1.31
AFB1YLR040C YBL029C-AQ3E756 94 aa6.87□□□□□ -1.31
AFB1YLR040C GTT3P39996 337 aa6.86□□□□□ -1.31
AFB1YLR040C WSC3Q12215 556 aa6.86□□□□□ -1.31
AFB1YLR040C VMA1P17255 1071 aaKnown RBP6.85□□□□□ -1.31
AFB1YLR040C VNX1P42839 908 aa6.83□□□□□ -1.32
AFB1YLR040C EDS1P38073 919 aa6.82□□□□□ -1.32
AFB1YLR040C COQ8P27697 501 aa6.81□□□□□ -1.32
AFB1YLR040C MIF2P35201 549 aa6.81□□□□□ -1.32
AFB1YLR040C SAM3Q08986 587 aa6.8□□□□□ -1.32
AFB1YLR040C SET1P38827 1080 aaKnown RBP6.77□□□□□ -1.33
AFB1YLR040C SET4P42948 560 aa6.77□□□□□ -1.33
AFB1YLR040C YOL036WQ08206 761 aa6.77□□□□□ -1.33
AFB1YLR040C PTC3P34221 468 aaKnown RBP6.75□□□□□ -1.33
AFB1YLR040C SPP1Q03012 353 aa6.75□□□□□ -1.33
AFB1YLR040C GYP5Q12344 894 aa6.73□□□□□ -1.33
AFB1YLR040C TIF11P38912 153 aaKnown RBP6.72□□□□□ -1.33
AFB1YLR040C RQC2Q12532 1038 aaKnown RBP6.72□□□□□ -1.33
AFB1YLR040C MSB4Q12317 492 aa6.71□□□□□ -1.34
AFB1YLR040C ULI1P43604 169 aa6.7□□□□□ -1.34
AFB1YLR040C NOP53Q12080 455 aaKnown RBP6.7□□□□□ -1.34
AFB1YLR040C GRE2Q12068 342 aaKnown RBP6.69□□□□□ -1.34
AFB1YLR040C DCW1P36091 449 aa6.68□□□□□ -1.34
AFB1YLR040C IOC2Q12072 812 aa6.68□□□□□ -1.34
AFB1YLR040C TRP5P00931 707 aaKnown RBP6.66□□□□□ -1.34
AFB1YLR040C GUT1P32190 709 aa6.65□□□□□ -1.34
AFB1YLR040C EAP1P36041 632 aaKnown RBP6.65□□□□□ -1.34
AFB1YLR040C ATH1P48016 1211 aa6.65□□□□□ -1.34
AFB1YLR040C HTA1P04911 132 aaKnown RBP6.62□□□□□ -1.35
AFB1YLR040C HTA2P04912 132 aa6.62□□□□□ -1.35
AFB1YLR040C ABP1P15891 592 aaKnown RBP6.62□□□□□ -1.35
AFB1YLR040C SOL3P38858 249 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms