RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	MTC1	P47018	478 aa	Known RBP	10.09	□□□□□ -0.79
PAM18	YLR008C	DRS1	P32892	752 aa	Known RBP	10	□□□□□ -0.81
PAM18	YLR008C	FAP1	P53971	965 aa		9.82	□□□□□ -0.84
PAM18	YLR008C	PRY3	P47033	881 aa		9.26	□□□□□ -0.93
PAM18	YLR008C	AAD16	Q02895	342 aa		8.84	□□□□□ -0.99
PAM18	YLR008C	PRI1	P10363	409 aa		8.8	□□□□□ -1
PAM18	YLR008C	YCK3	P39962	524 aa		8.7	□□□□□ -1.02
PAM18	YLR008C	HAA1	Q12753	694 aa	Known RBP	8.6	□□□□□ -1.03
PAM18	YLR008C	BFR2	Q06631	534 aa	Known RBP	8.57	□□□□□ -1.04
PAM18	YLR008C	DIP2	Q12220	943 aa	Predicted RBP	8.55	□□□□□ -1.04
PAM18	YLR008C	ISW2	Q08773	1120 aa		8.41	□□□□□ -1.06
PAM18	YLR008C	RPG1	P38249	964 aa	Known RBP	8.37	□□□□□ -1.07
PAM18	YLR008C	AVT3	P36062	692 aa		8.34	□□□□□ -1.07
PAM18	YLR008C	TSR3	Q12094	313 aa	Known RBP	8.31	□□□□□ -1.08
PAM18	YLR008C	RSE1	Q04693	1361 aa	Known RBP	8.12	□□□□□ -1.11
PAM18	YLR008C	MRPL32	P25348	183 aa		7.96	□□□□□ -1.14
PAM18	YLR008C	RPL17A	P05740	184 aa	Known RBP	7.85	□□□□□ -1.15
PAM18	YLR008C	TFA1	P36100	482 aa		7.85	□□□□□ -1.15
PAM18	YLR008C	RPL17B	P46990	184 aa	Known RBP	7.85	□□□□□ -1.15
PAM18	YLR008C	YGL015C	P33199	130 aa		7.81	□□□□□ -1.16
PAM18	YLR008C	REB1	P21538	810 aa		7.79	□□□□□ -1.16
PAM18	YLR008C	BUD31	P25337	157 aa	Predicted RBP	7.49	□□□□□ -1.21
PAM18	YLR008C	SPT21	P35209	758 aa		7.47	□□□□□ -1.21
PAM18	YLR008C	CDC27	P38042	758 aa		7.45	□□□□□ -1.22
PAM18	YLR008C	RIM101	P33400	625 aa		7.34	□□□□□ -1.23
PAM18	YLR008C	MAP2	P38174	421 aa	Known RBP	7.31	□□□□□ -1.24
PAM18	YLR008C	UBP10	P53874	792 aa	Predicted RBP	7.3	□□□□□ -1.24
PAM18	YLR008C	YKR023W	P36119	530 aa	Known RBP	7.29	□□□□□ -1.24
PAM18	YLR008C	HO	P09932	586 aa		7.2	□□□□□ -1.26
PAM18	YLR008C	DCD1	P06773	312 aa		7.16	□□□□□ -1.26
PAM18	YLR008C	TFC8	Q12308	588 aa		7.15	□□□□□ -1.26
PAM18	YLR008C	RQC2	Q12532	1038 aa	Known RBP	7.14	□□□□□ -1.27
PAM18	YLR008C	OXP1	P28273	1286 aa		7.11	□□□□□ -1.27
PAM18	YLR008C	YIL055C	P40523	627 aa	Known RBP	7.09	□□□□□ -1.27
PAM18	YLR008C	SIS1	P25294	352 aa	Known RBP	7.08	□□□□□ -1.28
PAM18	YLR008C	PTP3	P40048	928 aa		7.07	□□□□□ -1.28
PAM18	YLR008C	YAH1	Q12184	172 aa	Known RBP	7.07	□□□□□ -1.28
PAM18	YLR008C	TAF7	Q05021	590 aa		7.06	□□□□□ -1.28
PAM18	YLR008C	SCY1	P53009	804 aa		7.03	□□□□□ -1.28
PAM18	YLR008C	TIF4632	P39936	914 aa	Known RBP	7.02	□□□□□ -1.29
PAM18	YLR008C	UBP9	P39967	754 aa		6.99	□□□□□ -1.29
PAM18	YLR008C	SLX5	P32828	619 aa	Known RBP	6.97	□□□□□ -1.29
PAM18	YLR008C	TGL3	P40308	642 aa		6.97	□□□□□ -1.29
PAM18	YLR008C	SSP1	P38871	571 aa		6.96	□□□□□ -1.3
PAM18	YLR008C	BCH2	P36122	765 aa		6.94	□□□□□ -1.3
PAM18	YLR008C	RSM7	P47150	247 aa		6.92	□□□□□ -1.3
PAM18	YLR008C	YLR271W	Q06152	274 aa		6.89	□□□□□ -1.31
PAM18	YLR008C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.89	□□□□□ -1.31	not detected
PAM18	YLR008C	AI2	P03876	854 aa		6.83	□□□□□ -1.32
PAM18	YLR008C	EPS1	P40557	701 aa		6.83	□□□□□ -1.32
PAM18	YLR008C	BBC1	P47068	1157 aa		6.82	□□□□□ -1.32
PAM18	YLR008C	BDF1	P35817	686 aa		6.77	□□□□□ -1.33
PAM18	YLR008C	MGA2	P40578	1113 aa		6.73	□□□□□ -1.33
PAM18	YLR008C	PSD2	P53037	1138 aa	Known RBP	6.71	□□□□□ -1.34
PAM18	YLR008C	CST9	Q06032	482 aa		6.69	□□□□□ -1.34
PAM18	YLR008C	YBL029C-A	Q3E756	94 aa		6.66	□□□□□ -1.34
PAM18	YLR008C	MRM1	P25270	412 aa		6.63	□□□□□ -1.35
PAM18	YLR008C	MST1	P07236	462 aa		6.59	□□□□□ -1.35
PAM18	YLR008C	YOR238W	Q08634	303 aa		6.56	□□□□□ -1.36
PAM18	YLR008C	VNX1	P42839	908 aa		6.52	□□□□□ -1.37
PAM18	YLR008C	RTG3	P38165	486 aa		6.51	□□□□□ -1.37
PAM18	YLR008C	RCR1	P38212	213 aa		6.48	□□□□□ -1.37
PAM18	YLR008C	SPP1	Q03012	353 aa		6.47	□□□□□ -1.37
PAM18	YLR008C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.45	□□□□□ -1.38	not detected
PAM18	YLR008C	DMA1	P38823	416 aa		6.45	□□□□□ -1.38
PAM18	YLR008C	WSC3	Q12215	556 aa		6.45	□□□□□ -1.38
PAM18	YLR008C	YAP5	P40574	245 aa		6.44	□□□□□ -1.38
PAM18	YLR008C	VPS29	P38759	282 aa		6.42	□□□□□ -1.38
PAM18	YLR008C	PIB1	Q06651	286 aa		6.42	□□□□□ -1.38
PAM18	YLR008C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.41	□□□□□ -1.38	not detected
PAM18	YLR008C	AIR2	Q12476	344 aa	Known RBP	6.4	□□□□□ -1.38
PAM18	YLR008C	RAM2	P29703	316 aa		6.39	□□□□□ -1.39
PAM18	YLR008C	YFR006W	P43590	535 aa		6.39	□□□□□ -1.39
PAM18	YLR008C	YJL171C	P46992	396 aa		6.39	□□□□□ -1.39
PAM18	YLR008C	DBP1	P24784	617 aa	Known RBP	6.37	□□□□□ -1.39
PAM18	YLR008C	FKH1	P40466	484 aa		6.37	□□□□□ -1.39
PAM18	YLR008C	STS1	P38637	319 aa		6.35	□□□□□ -1.39
PAM18	YLR008C	TIF11	P38912	153 aa	Known RBP	6.35	□□□□□ -1.39
PAM18	YLR008C	LEO1	P38439	464 aa		6.34	□□□□□ -1.39
PAM18	YLR008C	GTT3	P39996	337 aa		6.33	□□□□□ -1.4
PAM18	YLR008C	MAK11	P20484	414 aa	Known RBP	6.32	□□□□□ -1.4
PAM18	YLR008C	LDB19	Q12502	818 aa		6.29	□□□□□ -1.4
PAM18	YLR008C	MIF2	P35201	549 aa		6.28	□□□□□ -1.4
PAM18	YLR008C	VMA1	P17255	1071 aa	Known RBP	6.25	□□□□□ -1.41
PAM18	YLR008C	COQ8	P27697	501 aa		6.25	□□□□□ -1.41
PAM18	YLR008C	SET1	P38827	1080 aa	Known RBP	6.25	□□□□□ -1.41
PAM18	YLR008C	ULI1	P43604	169 aa		6.24	□□□□□ -1.41
PAM18	YLR008C	BMT6	Q12291	365 aa		6.24	□□□□□ -1.41
PAM18	YLR008C	IOC2	Q12072	812 aa		6.21	□□□□□ -1.42
PAM18	YLR008C	EDS1	P38073	919 aa		6.2	□□□□□ -1.42
PAM18	YLR008C	SET4	P42948	560 aa		6.18	□□□□□ -1.42
PAM18	YLR008C	PTC3	P34221	468 aa	Known RBP	6.17	□□□□□ -1.42
PAM18	YLR008C	YOL036W	Q08206	761 aa		6.17	□□□□□ -1.42
PAM18	YLR008C	SAM3	Q08986	587 aa		6.15	□□□□□ -1.42
PAM18	YLR008C	GYP5	Q12344	894 aa		6.15	□□□□□ -1.42
PAM18	YLR008C	ATH1	P48016	1211 aa		6.14	□□□□□ -1.43
PAM18	YLR008C	GRE2	Q12068	342 aa	Known RBP	6.14	□□□□□ -1.43
PAM18	YLR008C	MSB4	Q12317	492 aa		6.13	□□□□□ -1.43
PAM18	YLR008C	NOP53	Q12080	455 aa	Known RBP	6.12	□□□□□ -1.43
PAM18	YLR008C	DCW1	P36091	449 aa		6.11	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms